Joke Reumers

19 papers Journal 16Unranked 3
YearRankTypeTitle / Venue / Authors
2017 J jnl
A random effects model for the identification of differential splicing (REIDS) using exon and HTA arrays.
BMC Bioinform.
Marijke Van Moerbeke, Adetayo Kasim, Willem Talloen, Joke Reumers, Hinrich W. H. Göhlmann, Ziv Shkedy
2015 J jnl
Halvade: scalable sequence analysis with MapReduce.
Bioinform.
Dries Decap, Joke Reumers, Charlotte Herzeel, Pascal Costanza, Jan Fostier
2015 — conf
Performance Analysis of a Parallel, Multi-node Pipeline for DNA Sequencing.
PPAM (2)
Dries Decap, Joke Reumers, Charlotte Herzeel, Pascal Costanza, Jan Fostier
2015 J jnl
QQ-SNV: single nucleotide variant detection at low frequency by comparing the quality quantiles.
BMC Bioinform.
Koen Van der Borght, Kim Thys, Yves Wetzels, Lieven Clement, Bie M. P. Verbist, Joke Reumers, Herman van Vlijmen, Jeroen Aerssens
2015 J jnl
ViVaMBC: estimating viral sequence variation in complex populations from illumina deep-sequencing data using model-based clustering.
BMC Bioinform.
Bie M. P. Verbist, Lieven Clement, Joke Reumers, Kim Thys, Alexander Vapirev, Willem Talloen, Yves Wetzels, Joris Meys, Jeroen Aerssens, Luc Bijnens, Olivier Thas
2015 J jnl
VirVarSeq: a low-frequency virus variant detection pipeline for Illumina sequencing using adaptive base-calling accuracy filtering.
Bioinform.
Bie M. P. Verbist, Kim Thys, Joke Reumers, Yves Wetzels, Koen Van der Borght, Willem Talloen, Jeroen Aerssens, Lieven Clement, Olivier Thas
2013 J jnl
Pipit: visualizing functional impacts of structural variations.
Bioinform.
Ryo Sakai, Matthieu Moisse, Joke Reumers, Jan Aerts
2012 J jnl
Huvariome: a web server resource of whole genome next-generation sequencing allelic frequencies to aid in pathological candidate gene selection.
J. Clin. Bioinform.
Andrew Stubbs, Elizabeth A. McClellan, Sebastiaan Horsman, Saskia D. Hiltemann, Ivo Palli, Stephan Nouwens, Anton H. J. Koning, Frits Hoogland, Joke Reumers, Daphne Heijsman, Sigrid Swagemakers, Andreas Kremer, Jules Meijerink, Diether Lambrechts, Peter J. van der Spek
2012 J jnl
SNPeffect 4.0: on-line prediction of molecular and structural effects of protein-coding variants.
Nucleic Acids Res.
Greet De Baets, Joost J. J. van Durme, Joke Reumers, Sebastian Maurer-Stroh, Peter Vanhee, Joaquín Dopazo, Joost Schymkowitz, Frederic Rousseau
2011 J jnl
An Evolutionary Trade-Off between Protein Turnover Rate and Protein Aggregation Favors a Higher Aggregation Propensity in Fast Degrading Proteins.
PLoS Comput. Biol.
Greet De Baets, Joke Reumers, Javier Delgado Blanco, Joaquín Dopazo, Joost Schymkowitz, Frederic Rousseau
2010 J jnl
PepX: a structural database of non-redundant protein-peptide complexes.
Nucleic Acids Res.
Peter Vanhee, Joke Reumers, Francois Stricher, Lies Baeten, Luis Serrano, Joost Schymkowitz, Frederic Rousseau
2009 J jnl
Using structural bioinformatics to investigate the impact of non synonymous SNPs and disease mutations: scope and limitations.
BMC Bioinform.
Joke Reumers, Joost Schymkowitz, Frederic Rousseau
2008 J jnl
Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases.
Nucleic Acids Res.
Joke Reumers, Lucía Conde, Ignacio Medina, Sebastian Maurer-Stroh, Joost J. J. van Durme, Joaquín Dopazo, Frederic Rousseau, Joost Schymkowitz
2008 J jnl
Reconstruction of Protein Backbones from the BriX Collection of Canonical Protein Fragments.
PLoS Comput. Biol.
Lies Baeten, Joke Reumers, Vicente Tur, François Stricher, Tom Lenaerts, Luis Serrano, Frederic Rousseau, Joost Schymkowitz
2008 — conf
Using structural bioinformatics to investigate the impact of non synonymous SNPs and disease mutations: scope and limitations.
AIMM
Joke Reumers, Joost Schymkowitz, Frederic Rousseau
2006 J jnl
PupaSuite: finding functional single nucleotide polymorphisms for large-scale genotyping purposes.
Nucleic Acids Res.
Lucía Conde, Juan M. Vaquerizas, Hernán Dopazo, Leonardo Arbiza, Joke Reumers, Frederic Rousseau, Joost Schymkowitz, Joaquín Dopazo
2006 J jnl
SNPeffect v2.0: a new step in investigating the molecular phenotypic effects of human non-synonymous SNPs.
Bioinform.
Joke Reumers, Sebastian Maurer-Stroh, Joost Schymkowitz, Frederic Rousseau
2005 J jnl
SNPeffect: a database mapping molecular phenotypic effects of human non-synonymous coding SNPs.
Nucleic Acids Res.
Joke Reumers, Joost Schymkowitz, Jesper Ferkinghoff-Borg, Francois Stricher, Luis Serrano, Frederic Rousseau
2003 — conf
Identifiability of Causal Effects in a Multi-Agent Causal Model.
IAT
Sam Maes, Joke Reumers, Bernard Manderick