John T. Prince

15 papers Journal 15
YearRankTypeTitle / Venue / Authors
2015 J jnl
A coherent mathematical characterization of isotope trace extraction, isotopic envelope extraction, and LC-MS correspondence.
BMC Bioinform.
Robert Smith, John T. Prince, Dan Ventura
2015 J jnl
Automated structural classification of lipids by machine learning.
Bioinform.
Ryan M. Taylor, Ryan H. Miller, Ryan D. Miller, Michael Porter, James Dalgleish, John T. Prince
2015 J jnl
Current controlled vocabularies are insufficient to uniquely map molecular entities to mass spectrometry signal.
BMC Bioinform.
Robert Smith, Ryan M. Taylor, John T. Prince
2015 J jnl
JAMSS: proteomics mass spectrometry simulation in Java.
Bioinform.
Robert Smith, John T. Prince
2015 J jnl
LC-MS alignment in theory and practice: a comprehensive algorithmic review.
Briefings Bioinform.
Robert Smith, Dan Ventura, John T. Prince
2014 J jnl
Controlling for confounding variables in MS-omics protocol: why modularity matters.
Briefings Bioinform.
Robert Smith, Dan Ventura, John T. Prince
2014 J jnl
Massifquant: open-source Kalman filter-based XC-MS isotope trace feature detection.
Bioinform.
Christopher J. Conley, Robert Smith, Ralf J. O. Torgrip, Ryan M. Taylor, Ralf Tautenhahn, John T. Prince
2014 J jnl
Proteomics, lipidomics, metabolomics: a mass spectrometry tutorial from a computer scientist's point of view.
BMC Bioinform.
Robert Smith, Andrew D. Mathis, Dan Ventura, John T. Prince
2013 J jnl
Metriculator: quality assessment for mass spectrometry-based proteomics.
Bioinform.
Ryan M. Taylor, Jamison Dance, Russ J. Taylor, John T. Prince
2013 J jnl
Novel algorithms and the benefits of comparative validation.
Bioinform.
Robert Smith, Dan Ventura, John T. Prince
2013 J jnl
Rubabel: Wrapping OpenBabel with Ruby.
J. Cheminformatics
Robert Smith, Ryan Williamson, Dan Ventura, John T. Prince
2013 J jnl
Statistical agglomeration: peak summarization for direct infusion lipidomics.
Bioinform.
Robert Smith, Tamil S. Anthonymuthu, Dan Ventura, John T. Prince
2009 J jnl
Integrating shotgun proteomics and mRNA expression data to improve protein identification.
Bioinform.
Smriti R. Ramakrishnan, Christine Vogel, John T. Prince, Rong Wang, Zhihua Li, Luiz O. F. Penalva, Margaret Myers, Edward M. Marcotte, Daniel P. Miranker
2008 J jnl
mspire: mass spectrometry proteomics in Ruby.
Bioinform.
John T. Prince, Edward M. Marcotte
2006 J jnl
A fast coarse filtering method for peptide identification by mass spectrometry.
Bioinform.
Smriti R. Ramakrishnan, Rui Mao, Aleksey A. Nakorchevskiy, John T. Prince, Willard S. Willard, Weijia Xu, Edward M. Marcotte, Daniel P. Miranker