John S. Garavelli

20 papers Journal 20

Year	Rank	Type	Title / Venue / Authors
2021	J	`jnl`	UniProt: the universal protein knowledgebase in 2021. Nucleic Acids Res. Alex Bateman, Maria Jesus Martin, Sandra E. Orchard, Michele Magrane, Rahat Agivetova, Shadab Ahmad, Emanuele Alpi, Emily H. Bowler-Barnett, Ramona Britto, Borisas Bursteinas, Hema Bye-A-Jee, Ray Coetzee, Austra Cukura, Alan W. Sousa da Silva, Paul Denny, Tunca Dogan, Thankgod Ebenezer, Jun Fan, Leyla Jael García Castro, Penelope Garmiri, George E. Georghiou, Leonardo Gonzales, Emma Hatton-Ellis, Abdulrahman Hussein, Alexandr Ignatchenko, Giuseppe Insana, Rizwan Ishtiaq, Petteri Jokinen, Vishal Joshi, Dushyanth Jyothi, Antonia Lock, Rodrigo Lopez, Aurelien Luciani, Jie Luo, Yvonne Lussi, Alistair MacDougall, Fábio Madeira, Mahdi Mahmoudy, Manuela Menchi, Alok Mishra, Katie Moulang, Andrew Nightingale, Carla Susana Oliveira, Sangya Pundir, Guoying Qi, Shriya Raj, Daniel Rice, Milagros Rodríguez-López, Rabie Saidi, Joseph Sampson, Tony Sawford, Elena Speretta, Edward Turner, Nidhi Tyagi, Preethi Vasudev, Vladimir Volynkin, Kate Warner, Xavier Watkins, Rossana Zaru, Hermann Zellner, Alan J. Bridge, Sylvain Poux, Nicole Redaschi, Lucila Aimo, Ghislaine Argoud-Puy, Andrea H. Auchincloss, Kristian B. Axelsen, Parit Bansal, Delphine Baratin, Marie-Claude Blatter, Jerven T. Bolleman, Emmanuel Boutet, Lionel Breuza, Cristina Casals-Casas, Edouard De Castro, Kamal Chikh Echioukh, Elisabeth Coudert, Béatrice A. Cuche, Mikael Doche, Dolnide Dornevil, Anne Estreicher, Maria Livia Famiglietti, Marc Feuermann, Elisabeth Gasteiger, Sebastien Gehant, Vivienne Baillie Gerritsen, Arnaud Gos, Nadine Gruaz-Gumowski, Ursula Hinz, Chantal Hulo, Nevila Hyka-Nouspikel, Florence Jungo, Guillaume Keller, Arnaud Kerhornou, Vicente Lara, Philippe Le Mercier, Damien Lieberherr, Thierry Lombardot, Xavier Martin, Patrick Masson, Anne Morgat, Teresa Batista Neto, Salvo Paesano, Ivo Pedruzzi, Sandrine Pilbout, Lucille Pourcel, Monica Pozzato, Manuela Pruess, Catherine Rivoire, Christian J. A. Sigrist, Karin Sonesson, Andre Stutz, Shyamala Sundaram, Michael Tognolli, Laure Verbregue, Cathy H. Wu, Cecilia N. Arighi, Leslie Arminski, Chuming Chen, Yongxing Chen, John S. Garavelli, Hongzhan Huang, Kati Laiho, Peter B. McGarvey, Darren A. Natale, Karen Ross, C. R. Vinayaka, Qinghua Wang, Yuqi Wang, Lai-Su Yeh, Jian Zhang, Patrick Ruch, Douglas Teodoro
2021	J	`jnl`	UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase. Bioinform. Alistair MacDougall, Vladimir Volynkin, Rabie Saidi, Diego Poggioli, Hermann Zellner, Emma Hatton-Ellis, Vishal Joshi, Claire O'Donovan, Sandra E. Orchard, Andrea H. Auchincloss, Delphine Baratin, Jerven T. Bolleman, Elisabeth Coudert, Edouard De Castro, Chantal Hulo, Patrick Masson, Ivo Pedruzzi, Catherine Rivoire, Cecilia N. Arighi, Qinghua Wang, Chuming Chen, Hongzhan Huang, John S. Garavelli, C. R. Vinayaka, Lai-Su Yeh, Darren A. Natale, Kati Laiho, Maria Jesus Martin, Alexandre Renaux, Klemens Pichler
2020	J	`jnl`	UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase. Bioinform. Alistair MacDougall, Vladimir Volynkin, Rabie Saidi, Diego Poggioli, Hermann Zellner, Emma Hatton-Ellis, Vishal Joshi, Claire O'Donovan, Sandra E. Orchard, Andrea H. Auchincloss, Delphine Baratin, Jerven T. Bolleman, Elisabeth Coudert, Edouard De Castro, Chantal Hulo, Patrick Masson, Ivo Pedruzzi, Catherine Rivoire, Cecilia N. Arighi, Qinghua Wang, Chuming Chen, Hongzhan Huang, John S. Garavelli, C. R. Vinayaka, Lai-Su Yeh, Darren A. Natale, Kati Laiho, Maria Jesus Martin, Alexandre Renaux, Klemens Pichler, UniProt Consortium
2019	J	`jnl`	PIRSitePredict for protein functional site prediction using position-specific rules. Database J. Biol. Databases Curation Chuming Chen, Qinghua Wang, Hongzhan Huang, Cholanayakanahalli R. Vinayaka, John S. Garavelli, Cecilia N. Arighi, Darren A. Natale, Cathy H. Wu
2007	J	`jnl`	"Good Annotation Practice" for Chemical Data in Biology. Silico Biol. Kirill Degtyarenko, Marcus Ennis, John S. Garavelli
2004	J	`jnl`	ProSight PTM: an integrated environment for protein identification and characterization by top-down mass spectrometry. Nucleic Acids Res. Richard D. LeDuc, Gregory K. Taylor, Yong-Bin Kim, Thomas E. Januszyk, Lee H. Bynum, Joseph V. Sola, John S. Garavelli, Neil L. Kelleher
2003	J	`jnl`	The RESID Database of Protein Modifications: 2003 developments. Nucleic Acids Res. John S. Garavelli
2001	J	`jnl`	Protein Information Resource: a community resource for expert annotation of protein data. Nucleic Acids Res. Winona C. Barker, John S. Garavelli, Zhenglin Hou, Hongzhan Huang, Robert S. Ledley, Peter B. McGarvey, Hans-Werner Mewes, Bruce C. Orcutt, Friedhelm Pfeiffer, Akira Tsugita, Cholanayakanahalli R. Vinayaka, Chunlin Xiao, Lai-Su L. Yeh, Cathy H. Wu
2001	J	`jnl`	The RESID Database of protein structure modifications and the NRL-3D Sequence-Structure Database. Nucleic Acids Res. John S. Garavelli, Zhenglin Hou, Nagarajan Pattabiraman, Robert M. Stephens
2000	J	`jnl`	PIR: a new resource for bioinformatics. Bioinform. Peter B. McGarvey, Hongzhan Huang, Winona C. Barker, Bruce C. Orcutt, John S. Garavelli, Geetha Y. Srinivasarao, Lai-Su L. Yeh, Chunlin Xiao, Cathy H. Wu
2000	J	`jnl`	The Protein Information Resource (PIR). Nucleic Acids Res. Winona C. Barker, John S. Garavelli, Hongzhan Huang, Peter B. McGarvey, Bruce C. Orcutt, Geetha Y. Srinivasarao, Chunlin Xiao, Lai-Su L. Yeh, Robert S. Ledley, Joseph F. Janda, Friedhelm Pfeiffer, Hans-Werner Mewes, Akira Tsugita, Cathy H. Wu
2000	J	`jnl`	The RESID Database of protein structure modifications: 2000 update. Nucleic Acids Res. John S. Garavelli
1999	J	`jnl`	The PIR-International Protein Sequence Database. Nucleic Acids Res. Winona C. Barker, John S. Garavelli, Peter B. McGarvey, Christopher R. Marzec, Bruce C. Orcutt, Geetha Y. Srinivasarao, Lai-Su L. Yeh, Robert S. Ledley, Hans-Werner Mewes, Friedhelm Pfeiffer, Akira Tsugita, Cathy H. Wu
1999	J	`jnl`	The RESID Database of protein structure modifications. Nucleic Acids Res. John S. Garavelli
1998	J	`jnl`	The PIR-International Protein Sequence Database. Nucleic Acids Res. Winona C. Barker, John S. Garavelli, Daniel H. Haft, Lois T. Hunt, Christopher R. Marzec, Bruce C. Orcutt, Geetha Y. Srinivasarao, Lai-Su L. Yeh, Robert S. Ledley, Hans-Werner Mewes, Friedhelm Pfeiffer, Akira Tsugita
1997	J	`jnl`	The Protein Information Resource (PIR) and the PIR-International Protein Sequence Database. Nucleic Acids Res. David G. George, Robert J. Dodson, John S. Garavelli, Daniel H. Haft, Lois T. Hunt, Christopher R. Marzec, Bruce C. Orcutt, Kathryn E. Sidman, Geetha Y. Srinivasarao, Lai-Su L. Yeh, Leslie Arminski, Robert S. Ledley, Akira Tsugita, Winona C. Barker
1992	J	`jnl`	GBPARSE: a parser for the GenBank flat-file format with the new feature table format. Comput. Appl. Biosci. R. L. Read, D. Davison, J. E. Chappelear, John S. Garavelli
1988	J	`jnl`	An algorithm for the multiplication of symmetric polynomials. ACM Trans. Math. Softw. John S. Garavelli
1986	J	`jnl`	Comments on papers concerning computer enumeration of permutation isomers. Comput. Chem. Hans Dolhaine, John S. Garavelli, Jack E. Leonard
1985	J	`jnl`	Improvements in the computer enumeration of permutation isomers. Comput. Chem. John S. Garavelli, Jack E. Leonard