John K. Salmon

31 papers A* 3A 15C 1Misc 2Journal 4Unranked 6

Year	Rank	Type	Title / Venue / Authors
2021	A	`conf`	Anton 3: twenty microseconds of molecular dynamics simulation before lunch. SC David E. Shaw, Peter J. Adams, Asaph Azaria, Joseph A. Bank, Brannon Batson, Alistair Bell, Michael Bergdorf, Jhanvi Bhatt, J. Adam Butts, Timothy Correia, Robert M. Dirks, Ron O. Dror, Michael P. Eastwood, Bruce Edwards, Amos Even, Peter Feldmann, Michael Fenn, Christopher H. Fenton, Anthony Forte, Joseph Gagliardo, Gennette Gill, Maria Gorlatova, Brian Greskamp, J. P. Grossman, Justin Gullingsrud, Anissa Harper, William Hasenplaugh, Mark Heily, Benjamin Colin Heshmat, Jeremy Hunt, Douglas J. Ierardi, Lev Iserovich, Bryan L. Jackson, Nick P. Johnson, Mollie M. Kirk, John L. Klepeis, Jeffrey S. Kuskin, Kenneth M. Mackenzie, Roy J. Mader, Richard McGowen, Adam McLaughlin, Mark A. Moraes, Mohamed H. Nasr, Lawrence J. Nociolo, Lief O'Donnell, Andrew Parker, Jon L. Peticolas, Goran Pocina, Cristian Predescu, Terry Quan, John K. Salmon, Carl Schwink, Keun Sup Shim, Naseer Siddique, Jochen Spengler, Tamas Szalay, Raymond Tabladillo, Reinhard Tartler, Andrew G. Taube, Michael Theobald, Brian Towles, William Vick, Stanley C. Wang, Michael Wazlowski, Madeleine J. Weingarten, John M. Williams, Kevin A. Yuh
2014	A	`conf`	Anton 2: Raising the Bar for Performance and Programmability in a Special-Purpose Molecular Dynamics Supercomputer. SC David E. Shaw, J. P. Grossman, Joseph A. Bank, Brannon Batson, J. Adam Butts, Jack C. Chao, Martin M. Deneroff, Ron O. Dror, Amos Even, Christopher H. Fenton, Anthony Forte, Joseph Gagliardo, Gennette Gill, Brian Greskamp, C. Richard Ho, Douglas J. Ierardi, Lev Iserovich, Jeffrey Kuskin, Richard H. Larson, Timothy Layman, Li-Siang Lee, Adam K. Lerer, Chester Li, Daniel Killebrew, Kenneth M. Mackenzie, Shark Yeuk-Hai Mok, Mark A. Moraes, Rolf Mueller, Lawrence J. Nociolo, Jon L. Peticolas, Terry Quan, Daniel Ramot, John K. Salmon, Daniele Paolo Scarpazza, U. Ben Schafer, Naseer Siddique, Christopher W. Snyder, Jochen Spengler, Ping Tak Peter Tang, Michael Theobald, Horia Toma, Brian Towles, Benjamin Vitale, Stanley C. Wang, Cliff Young
2013	A	`conf`	Extending the Generality of Molecular Dynamics Simulations on a Special-Purpose Machine. IPDPS Daniele Paolo Scarpazza, Douglas J. Ierardi, Adam K. Lerer, Kenneth M. Mackenzie, Albert C. Pan, Joseph A. Bank, Edmond Chow, Ron O. Dror, J. P. Grossman, Daniel Killebrew, Mark A. Moraes, Cristian Predescu, John K. Salmon, David E. Shaw
2011	J	`jnl`	Overcoming Communication Latency Barriers in Massively Parallel Scientific Computation. IEEE Micro Ron O. Dror, J. P. Grossman, Kenneth M. Mackenzie, Brian Towles, Edmond Chow, John K. Salmon, Cliff Young, Joseph A. Bank, Brannon Batson, Martin M. Deneroff, Jeffrey Kuskin, Richard H. Larson, Mark A. Moraes, David E. Shaw
2011	A	`conf`	Parallel random numbers: as easy as 1, 2, 3. SC John K. Salmon, Mark A. Moraes, Ron O. Dror, David E. Shaw
2010	A	`conf`	Exploiting 162-Nanosecond End-to-End Communication Latency on Anton. SC Ron O. Dror, J. P. Grossman, Kenneth M. Mackenzie, Brian Towles, Edmond Chow, John K. Salmon, Cliff Young, Joseph A. Bank, Brannon Batson, Martin M. Deneroff, Jeffrey Kuskin, Richard H. Larson, Mark A. Moraes, David E. Shaw
2009	A	`conf`	A 32x32x32, spatially distributed 3D FFT in four microseconds on Anton. SC Cliff Young, Joseph A. Bank, Ron O. Dror, J. P. Grossman, John K. Salmon, David E. Shaw
2009	A	`conf`	Millisecond-scale molecular dynamics simulations on Anton. SC David E. Shaw, Ron O. Dror, John K. Salmon, J. P. Grossman, Kenneth M. Mackenzie, Joseph A. Bank, Cliff Young, Martin M. Deneroff, Brannon Batson, Kevin J. Bowers, Edmond Chow, Michael P. Eastwood, Doug Ierardi, John L. Klepeis, Jeffrey Kuskin, Richard H. Larson, Kresten Lindorff-Larsen, Paul Maragakis, Mark A. Moraes, Stefano Piana, Yibing Shan, Brian Towles
2009	A	`conf`	Millisecond-scale molecular dynamics simulations on Anton. SC David E. Shaw, Ron O. Dror, John K. Salmon, J. P. Grossman, Kenneth M. Mackenzie, Joseph A. Bank, Cliff Young, Martin M. Deneroff, Brannon Batson, Kevin J. Bowers, Edmond Chow, Michael P. Eastwood, Doug Ierardi, John L. Klepeis, Jeffrey Kuskin, Richard H. Larson, Kresten Lindorff-Larsen, Paul Maragakis, Mark A. Moraes, Stefano Piana, Yibing Shan, Brian Towles
2008	J	`jnl`	Anton, a special-purpose machine for molecular dynamics simulation. Commun. ACM David E. Shaw, Martin M. Deneroff, Ron O. Dror, Jeffrey Kuskin, Richard H. Larson, John K. Salmon, Cliff Young, Brannon Batson, Kevin J. Bowers, Jack C. Chao, Michael P. Eastwood, Joseph Gagliardo, J. P. Grossman, C. Richard Ho, Doug Ierardi, István Kolossváry, John L. Klepeis, Timothy Layman, Christine McLeavey, Mark A. Moraes, Rolf Mueller, Edward C. Priest, Yibing Shan, Jochen Spengler, Michael Theobald, Brian Towles, Stanley C. Wang
2008	C	`conf`	Hierarchical simulation-based verification of Anton, a special-purpose parallel machine. ICCD J. P. Grossman, John K. Salmon, C. Richard Ho, Doug Ierardi, Brian Towles, Brannon Batson, Jochen Spengler, Stanley C. Wang, Rolf Mueller, Michael Theobald, Cliff Young, Joseph Gagliardo, Martin M. Deneroff, Ron O. Dror, David E. Shaw
2008	A*	`conf`	High-throughput pairwise point interactions in Anton, a specialized machine for molecular dynamics simulation. HPCA Richard H. Larson, John K. Salmon, Ron O. Dror, Martin M. Deneroff, Cliff Young, J. P. Grossman, Yibing Shan, John L. Klepeis, David E. Shaw
2008	Misc	`conf`	Simulation and embedded software development for Anton, a parallel machine with heterogeneous multicore ASICs. CODES+ISSS J. P. Grossman, Cliff Young, Joseph A. Bank, Kenneth M. Mackenzie, Doug Ierardi, John K. Salmon, Ron O. Dror, David E. Shaw
2007	A*	`conf`	Anton, a special-purpose machine for molecular dynamics simulation. ISCA David E. Shaw, Martin M. Deneroff, Ron O. Dror, Jeffrey Kuskin, Richard H. Larson, John K. Salmon, Cliff Young, Brannon Batson, Kevin J. Bowers, Jack C. Chao, Michael P. Eastwood, Joseph Gagliardo, J. P. Grossman, C. Richard Ho, Doug Ierardi, István Kolossváry, John L. Klepeis, Timothy Layman, Christine McLeavey, Mark A. Moraes, Rolf Mueller, Edward C. Priest, Yibing Shan, Jochen Spengler, Michael Theobald, Brian Towles, Stanley C. Wang
2006	A	`conf`	Molecular dynamics - Scalable algorithms for molecular dynamics simulations on commodity clusters. SC Kevin J. Bowers, Edmond Chow, Huafeng Xu, Ron O. Dror, Michael P. Eastwood, Brent A. Gregersen, John L. Klepeis, István Kolossváry, Mark A. Moraes, Federico D. Sacerdoti, John K. Salmon, Yibing Shan, David E. Shaw
1998	A	`conf`	Scaling of Beowulf-Class Distributed Systems. HPDC John K. Salmon, Thomas L. Sterling, Rajesh Bordawekar, Christopher Stein
1998	A	`conf`	Scaling of Beowulf-class Distributed Systems. SC John K. Salmon, Christopher Stein, Thomas L. Sterling
1997	J	`jnl`	Halo World: Tools for Parallel Cluster Finding in Astrophysical N-body Simulations. Data Min. Knowl. Discov. David W. Pfitzner, John K. Salmon, Thomas L. Sterling
1997	Misc	`conf`	Parallel Supercomputing with Commodity Components. PDPTA Michael S. Warren, Donald J. Becker, M. Patrick Goda, John K. Salmon, Thomas L. Sterling
1997	—	`conf`	Parallel, Out-of-Core Methods for N-body Simulation. PP John K. Salmon, Michael S. Warren
1997	A	`conf`	Pentium Pro Inside: I. A Treecode at 430 Gigaflops on ASCI Red, II. Price/Performance of $50/Mflop on Loki and Hyglac. SC Michael S. Warren, John K. Salmon, Donald J. Becker, M. Patrick Goda, Thomas L. Sterling, W. Winckelmans
1996	A*	`conf`	Parallel Halo Finding in N-Body Cosmology Simulations. KDD David W. Pfitzner, John K. Salmon
1995	—	`conf`	A Parallel, Portable and Versatile Treecode. PP Michael S. Warren, John K. Salmon
1995	—	`conf`	The Fast Solution of Three-Dimensional Fluid Dynamical N-Body Problems Using Parallel Tree Codes: Vortex Element Method and Boundary Element Method. PP G. S. Winckelmans, John K. Salmon, Michael S. Warren, A. Leonard
1994	J	`jnl`	Fast Parallel Tree Codes for Gravitational and Fluid Dynamical N-Body Problems. Int. J. High Perform. Comput. Appl. John K. Salmon, Michael S. Warren
1993	A	`conf`	A parallel hashed Oct-Tree N-body algorithm. SC Michael S. Warren, John K. Salmon
1992	A	`conf`	Astrophysical N-body Simulations Using Hierarchical Tree Data Structures. SC Michael S. Warren, John K. Salmon
1989	A	`conf`	Practical parallel supercomputing: examples from chemistry and physics. SC Geoffrey Charles Fox, Paul G. Hipes, John K. Salmon
1988	—	`conf`	A mathematical analysis of the scattered decomposition. C³P John K. Salmon
1988	—	`conf`	An O(NlogN) hypercube N-body integrator. C³P Michael S. Warren, John K. Salmon
1988	—	`conf`	Moose: a multi-tasking operating system of hypercubes. C³P John K. Salmon, S. Callahan, Jon Flower, Adam Kolawa