Joanna Polanska

72 papers C 3Misc 10Journal 26Unranked 33

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Manifold Integration of Lung Emphysema Signatures (MILES): A Radiomic-Based Study. Mach. Learn. Knowl. Extr. Marek Socha, Agata Durawa, Malgorzata Jelito, Katarzyna Dziadziuszko, Witold Rzyman, Edyta Szurowska, Joanna Polanska
2026	J	`jnl`	dpGMM: A new R package for efficient and robust Gaussian mixture modeling of 1D and 2D data. J. Comput. Sci. Joanna Zyla, Kamila Szumala, Andrzej Polanski, Joanna Polanska, Michal Marczyk
2025	—	`conf`	Post-Processing of Thresholding or Deep Learning Methods for Enhanced Tissue Segmentation of Whole-Slide Histopathological Images. BIOSTEC (1) Michal Marczyk, Agata Wróbel, Julia Merta, Joanna Polanska
2024	J	`jnl`	A mapping-free natural language processing-based technique for sequence search in nanopore long-reads. BMC Bioinform. Tomasz Strzoda, Lourdes Cruz-Garcia, Mustafa Najim, Christophe Badie, Joanna Polanska
2024	J	`jnl`	DALSA: Domain Adaptation for Supervised Learning From Sparsely Annotated MR Images. CoRR Michael Götz, Christian Weber, Franciszek Binczyk, Joanna Polanska, Rafal Tarnawski, Barbara Bobek-Billewicz, Ullrich Köthe, Jens Kleesiek, Bram Stieltjes, Klaus H. Maier-Hein
2023	J	`jnl`	Activation maps of convolutional neural networks as a tool for brain degeneration tracking in early diagnosis of dementia in Parkinson's disease based on magnetic resonance imaging. Signal Image Video Process. Aleksandra Suwalska, Joanna Siuda, Szymon Kocot, Weronika Zmuda, Monika Rudzinska-Bar, Joanna Polanska
2023	J	`jnl`	BRONCO: Automated modelling of the bronchovascular bundle using the Computed Tomography Images. CoRR Wojciech Prazuch, Marek Socha, Anna Mrukwa, Aleksandra Suwalska, Agata Durawa, Malgorzata Jelitto-Górska, Katarzyna Dziadziuszko, Edyta Szurowska, Pawel Bozek, Michal Marczyk, Witold Rzyman, Joanna Polanska
2023	J	`jnl`	Combining low-dose CT-based radiomics and metabolomics for early lung cancer screening support. CoRR Joanna Zyla, Michal Marczyk, Wojciech Prazuch, Marek Socha, Aleksandra Suwalska, Agata Durawa, Malgorzata Jelitto-Górska, Katarzyna Dziadziuszko, Edyta Szurowska, Witold Rzyman, Piotr Widlak, Joanna Polanska
2023	Misc	`conf`	Feature Selection Methods Comparison: Logistic Regression-Based Algorithm and Neural Network Tools. PACBB Katarzyna Sieradzka, Joanna Polanska
2023	J	`jnl`	Isotopic envelope identification by analysis of the spatial distribution of components in MALDI-MSI data. CoRR Anna Glodek, Joanna Polanska, Marta Gawin
2023	J	`jnl`	Pathological changes or technical artefacts? The problem of the heterogenous databases in COVID-19 CXR image analysis. Comput. Methods Programs Biomed. Marek Socha, Wojciech Prazuch, Aleksandra Suwalska, Pawel Foszner, Joanna Tobiasz, Jerzy Jaroszewicz, Katarzyna Gruszczynska, Magdalena Sliwinska, Mateusz Nowak, Barbara Gizycka, Gabriela Zapolska, Tadeusz Popiela, Grzegorz Przybylski, Piotr Fiedor, Malgorzata Pawlowska, Robert Flisiak, Krzysztof Simon, Jerzy Walecki, Andrzej Cieszanowski, Edyta Szurowska, Michal Marczyk, Joanna Polanska
2023	—	`conf`	Unsupervised Investigation of Information Captured in Pathway Activity Score in scRNA-Seq Analysis. IWBBIO (2) Kamila Szumala, Joanna Polanska, Joanna Zyla
2022	J	`jnl`	CIRCA: comprehensible online system in support of chest X-rays-based COVID-19 diagnosis. CoRR Wojciech Prazuch, Aleksandra Suwalska, Marek Socha, Joanna Tobiasz, Pawel Foszner, Jerzy Jaroszewicz, Katarzyna Gruszczynska, Magdalena Sliwinska, Jerzy Walecki, Tadeusz Popiela, Grzegorz Przybylski, Andrzej Cieszanowski, Mateusz Nowak, Malgorzata Pawlowska, Robert Flisiak, Krzysztof Simon, Gabriela Zapolska, Barbara Gizycka, Edyta Szurowska, Michal Marczyk, Joanna Polanska
2022	J	`jnl`	CMB-HUNT: Automatic detection of cerebral microbleeds using a deep neural network. Comput. Biol. Medicine Aleksandra Suwalska, Yingzhe Wang, Ziyu Yuan, Yanfeng Jiang, Dongliang Zhu, Jinhua Chen, Mei Cui, Xingdong Chen, Chen Suo, Joanna Polanska
2022	—	`conf`	Can We Detect T Cell Receptors from Long-Read RNA-Seq Data? IWBBIO (2) Justyna Mika, Serge M. Candéias, Christophe Badie, Joanna Polanska
2022	—	`conf`	Comparison of Batch Effect Removal Methods for High Dimensional Mass Cytometry Data. IWBBIO (2) Aleksandra Suwalska, Nelita du Plessis-Burger, Gian van der Spuy, Joanna Polanska
2022	J	`jnl`	DiviK: divisive intelligent K-means for hands-free unsupervised clustering in big biological data. BMC Bioinform. Grzegorz Mrukwa, Joanna Polanska
2022	—	`conf`	How to Compare Various Clustering Outcomes? Metrices to Investigate Breast Cancer Patient Subpopulations Based on Proteomic Profiles. IWBBIO (2) Joanna Tobiasz, Joanna Polanska
2022	J	`jnl`	POLCOVID: a multicenter multiclass chest X-ray database (Poland, 2020-2021). CoRR Aleksandra Suwalska, Joanna Tobiasz, Wojciech Prazuch, Marek Socha, Pawel Foszner, Jerzy Jaroszewicz, Katarzyna Gruszczynska, Magdalena Sliwinska, Jerzy Walecki, Tadeusz Popiela, Grzegorz Przybylski, Mateusz Nowak, Piotr Fiedor, Malgorzata Pawlowska, Robert Flisiak, Krzysztof Simon, Gabriela Zapolska, Barbara Gizycka, Edyta Szurowska, Michal Marczyk, Andrzej Cieszanowski, Joanna Polanska
2022	—	`conf`	Radiomic-Based Lung Nodule Classification in Low-Dose Computed Tomography. IWBBIO (1) Wojciech Prazuch, Malgorzata Jelitto-Górska, Agata Durawa, Katarzyna Dziadziuszko, Joanna Polanska
2021	Misc	`conf`	May Gender Have an Impact on Methylation Profile and Survival Prognosis in Acute Myeloid Leukemia? PACBB Agnieszka Cecotka, Lukasz Krol, Grainne O'Brien, Christophe Badie, Joanna Polanska
2021	C	`conf`	Preliminary study for a fully automated pre-gating method for high-dimensional mass cytometry data. BIBE Aleksandra Suwalska, Joanna Polanska
2020	J	`jnl`	Classification supporting COVID-19 diagnostics based on patient survey data. CoRR Joanna Henzel, Joanna Tobiasz, Michal Kozielski, Malgorzata Bach, Pawel Foszner, Aleksandra Gruca, Mateusz Kania, Justyna Mika, Anna Papiez, Aleksandra Werner, Joanna Zyla, Jerzy Jaroszewicz, Joanna Polanska, Marek Sikora
2020	J	`jnl`	GaMRed - Adaptive Filtering of High-Throughput Biological Data. IEEE ACM Trans. Comput. Biol. Bioinform. Michal Marczyk, Roman Jaksik, Andrzej Polanski, Joanna Polanska
2020	Misc	`conf`	Robustness of Pathway Enrichment Analysis to Transcriptome-Wide Gene Expression Platform. PACBB Joanna Zyla, Kinga Leszczorz, Joanna Polanska
2019	J	`jnl`	BatchI: Batch effect Identification in high-throughput screening data using a dynamic programming algorithm. Bioinform. Anna Papiez, Michal Marczyk, Joanna Polanska, Andrzej Polanski
2019	C	`conf`	Breast Cancer Heterogeneity Investigation: Multiple k-Means Clustering Approach. BIBE Joanna Tobiasz, Christos Hatzis, Joanna Polanska
2019	J	`jnl`	Gene set enrichment for reproducible science: comparison of CERNO and eight other algorithms. Bioinform. Joanna Zyla, Michal Marczyk, Teresa Domaszewska, Stefan H. E. Kaufmann, Joanna Polanska, January 3rd Weiner
2019	J	`jnl`	Machine learning techniques combined with dose profiles indicate radiation response biomarkers. Int. J. Appl. Math. Comput. Sci. Anna Papiez, Christophe Badie, Joanna Polanska
2019	C	`conf`	Mathematical Modelling and Effect Size Analysis in Support of Searching for the Proteomic Signature of Radiotherapy Toxicity. BIBE Kinga Leszczorz, Omid Azimzadeh, Soile Tapio, Michael Atkinson, Joanna Polanska
2018	—	`conf`	Are Radiosensitive and Regular Response Cells Homogeneous in Their Correlations Between Copy Number State and Surviving Fraction After Irradiation? IWBBIO (1) Joanna Tobiasz, Najla Al-Harbi, Sara Bin Judia, Salma Majid, Ghazi Alsbeih, Joanna Polanska
2018	Misc	`conf`	Can an Integrative SNP Approach Substitute Standard Identification in Comprehensive Case/Control Analyses? PACBB Anna Papiez, Marcin Skrzypski, Amelia Szymanowska-Narloch, Ewa Jassem, Agnieszka Maciejewska, Ryszard Pawlowski, Rafal Dziadziuszko, Jacek Jassem, Witold Rzyman, Joanna Polanska
2017	—	`conf`	Comparative Analysis of MicroRNA-Target Gene Interaction Prediction Algorithms Based on Integrated P-Value Calculation. ICMMI Anna Krawczyk, Joanna Polanska
2017	—	`conf`	Improving peak detection by Gaussian mixture modeling of mass spectral signal. ICFSP Michal Marczyk, Joanna Polanska, Andrzej Polanski
2017	J	`jnl`	MiMSeg - an algorithm for automated detection of tumor tissue on NMR apparent diffusion coefficient maps. Inf. Sci. Franciszek Binczyk, Bram Stjelties, Christian Weber, Michael Götz, Klaus H. Maier-Hein, Hans-Peter Meinzer, Barbara Bobek-Billewicz, Rafal Tarnawski, Joanna Polanska
2017	Misc	`conf`	Multidimensional Feature Selection and Interaction Mining with Decision Tree Based Ensemble Methods. PACBB Lukasz Krol, Joanna Polanska
2017	Misc	`conf`	Novel Method of Identifying DNA Methylation Fingerprint of Acute Myeloid Leukaemia. PACBB Agnieszka Cecotka, Joanna Polanska
2017	J	`jnl`	Ranking metrics in gene set enrichment analysis: do they matter? BMC Bioinform. Joanna Zyla, Michal Marczyk, January 3rd Weiner, Joanna Polanska
2017	Misc	`conf`	Reproducibility of Finding Enriched Gene Sets in Biological Data Analysis. PACBB Joanna Zyla, Michal Marczyk, Joanna Polanska
2016	—	`conf`	A Novel Divisive iK-Means Algorithm with Region-Driven Feature Selection as a Tool for Automated Detection of Tumour Heterogeneity in MALDI IMS Experiments. IWBBIO Grzegorz Mrukwa, Grzegorz Drazek, Monika Pietrowska, Piotr Widlak, Joanna Polanska
2016	—	`conf`	Comparative Analysis of microRNA-Target Gene Interaction Prediction Algorithms - The Attempt to Compare the Results of Three Algorithms. IWBBIO Anna Krawczyk, Joanna Polanska
2016	J	`jnl`	DALSA: Domain Adaptation for Supervised Learning From Sparsely Annotated MR Images. IEEE Trans. Medical Imaging Michael Götz, Christian Weber, Franciszek Binczyk, Joanna Polanska, Rafal Tarnawski, Barbara Bobek-Billewicz, Ullrich Köthe, Jens Kleesiek, Bram Stieltjes, Klaus H. Maier-Hein
2016	Misc	`conf`	Deep Data Analysis of a Large Microarray Collection for Leukemia Biomarker Identification. PACBB Wojciech Labaj, Anna Papiez, Joanna Polanska, Andrzej Polanski
2016	—	`conf`	Multigene P-value Integration Based on SNPs Investigation for Seeking Radiosensitivity Signatures. IWBBIO Joanna Zyla, Christophe Badie, Ghazi Alsbeih, Joanna Polanska
2016	Misc	`conf`	Sensitivity, Specificity and Prioritization of Gene Set Analysis When Applying Different Ranking Metrics. PACBB Joanna Zyla, Michal Marczyk, Joanna Polanska
2015	—	`conf`	Automatische Tumorsegmentierung mit spärlich annotierter Lernbasis. Bildverarbeitung für die Medizin Michael Götz, Christian Weber, Franciszek Binczyk, Joanna Polanska, Rafal Tarnawski, Barbara Bobek-Billewicz, Hans-Peter Meinzer, Bram Stieltjes, Klaus H. Maier-Hein
2015	—	`conf`	Comparison of Black Box Implementations of Two Algorithms of Processing of NMR Spectra, Gaussian Mixture Model and Singular Value Decomposition. BIOSIGNALS Michal Staniszewski, Franciszek Binczyk, Agnieszka Skorupa, Lukasz Boguszewicz, Maria Sokol, Joanna Polanska, Andrzej Polanski
2015	—	`conf`	Is the Identification of SNP-miRNA Interactions Supporting the Prediction of Human Lymphocyte Transcriptional Radiation Responses?. BIOINFORMATICS Marzena Dolbniak, Joanna Zyla, Sylwia Kabacik, Grainne Manning, Christophe Badie, Ghazi Alsbeih, Joanna Polanska
2015	—	`conf`	Mixture Model Based Efficient Method for Magnetic Resonance Spectra Quantification. IWBBIO (2) Franciszek Binczyk, Michal Marczyk, Joanna Polanska
2015	Misc	`conf`	Modeling of Imaging Mass Spectrometry Data and Testing by Permutation for Biomarkers Discovery in Tissues. ICCS Michal Marczyk, Grzegorz Drazek, Monika Pietrowska, Piotr Widlak, Joanna Polanska, Andrzej Polanski
2015	—	`conf`	Statistical Integration of p-values for Enhancing Discovery of Radiotoxicity Gene Signatures. IWBBIO (1) Anna Papiez, Sylwia Kabacik, Christophe Badie, Simon Bouffler, Joanna Polanska
2015	—	`conf`	Überwachtes Lernen zur Prädiktion von Tumorwachstum. Bildverarbeitung für die Medizin Christian Weber, Michael Götz, Franciszek Binczyk, Joanna Polanska, Rafal Tarnawski, Barbara Bobek-Billewicz, Hans-Peter Meinzer, Bram Stieltjes, Klaus H. Maier-Hein
2014	J	`jnl`	An Efficient Algorithm for Microarray Probes Re-annotation. Trans. Comput. Collect. Intell. Pawel Foszner, Aleksandra Gruca, Andrzej Polanski, Michal Marczyk, Roman Jaksik, Joanna Polanska
2014	—	`conf`	Automatic detection of outlying microarrays using multi-array quality metrics. IWBBIO Michal Marczyk, Lukasz Krol, Joanna Polanska
2014	—	`conf`	Impact of missing genotype imputation on the power of Genome Wide Association Studies. IWBBIO Lukasz Krol, Ghazi Alsbeih, Christophe Badie, Joanna Polanska
2014	—	`conf`	Improvement in the accuracy of Nuclear Magnetic Resonance spectrum analysis by automatic tuning of phase correction algorithms. IWBBIO Franciszek Binczyk, Rafal Tarnawski, Joanna Polanska
2014	—	`conf`	Integrating Expression Data from Different Microarray Platforms in Search of Biomarkers of Radiosensitivity. IWBBIO Anna Papiez, Paul Finnon, Christophe Badie, Simon Bouffler, Joanna Polanska
2014	—	`conf`	Methods for Quality Control of Low-resolution MALDI-ToF Spectra. BIOINFORMATICS Michal Marczyk, Joanna Polanska
2014	—	`conf`	Modelling of Genetic Interactions in GWAS Reveals More Complex Relations between Genotype and Phenotype. BIOINFORMATICS Joanna Zyla, Christophe Badie, Ghazi Alsbeih, Joanna Polanska
2014	J	`jnl`	Sources of High Variance between Probe Signals in Affymetrix Short Oligonucleotide Microarrays. Sensors Roman Jaksik, Michal Marczyk, Joanna Polanska, Joanna Rzeszowska-Wolny
2013	J	`jnl`	Adaptive filtering of microarray gene expression data based on Gaussian mixture decomposition. BMC Bioinform. Michal Marczyk, Roman Jaksik, Andrzej Polanski, Joanna Polanska
2013	—	`conf`	Comparative analysis of the annotation systems of Mus musculus high density expression microarray. IWBBIO Anna Cichonska, Roman Jaksik, Joanna Polanska, Wieslawa Widlak
2013	—	`conf`	Comparison of Algorithms for Profile-Based Alignment of Low Resolution MALDI-ToF Spectra. ICMMI Michal Marczyk, Joanna Polanska, Andrzej Polanski
2013	—	`conf`	Gaussian mixture model based analysis of apparent diffusion coefficient maps for differentiation between malignant and benign brain tumours - preliminary results. IWBBIO Joanna Polanska, Franciszek Binczyk, Anna Hebda, Barbara Bobek-Billewicz
2013	—	`conf`	Investigation for Genetic Signature of Radiosensitivity - Data Analysis. ICMMI Joanna Zyla, Paul Finnon, Robert Bulman, Simon Bouffler, Christophe Badie, Joanna Polanska
2013	—	`conf`	Seeking for Genetic Signature of Radiosensitivity - Methods for Data Analysis. IWBBIO Joanna Zyla, Joanna Polanska, Paul Finnon, Robert Bulman, Simon Bouffler, Christophe Badie
2012	J	`jnl`	Gaussian mixture decomposition in the analysis of MALDI-TOF spectra. Expert Syst. J. Knowl. Eng. Joanna Polanska, Malgorzata Plechawska, Monika Pietrowska, Lukasz Marczak
2011	—	`conf`	Efficient Algorithm for Microarray Probes Re-annotation. ICCCI (2) Pawel Foszner, Aleksandra Gruca, Andrzej Polanski, Michal Marczyk, Roman Jaksik, Joanna Polanska
2010	—	`conf`	Distant Analysis of the GENEPI-ENTB Databank - System Overview. CN Pawel Foszner, Aleksandra Gruca, Joanna Polanska
2009	—	`conf`	Analyze of Maldi-TOF Proteomic Spectra with Usage of Mixture of Gaussian Distributions. ICMMI Malgorzata Plechawska, Joanna Polanska, Andrzej Polanski, Monika Pietrowska, Rafal Tarnawski, Piotr Widlak, Maciej Stobiecki, Lukasz Marczak
2009	—	`conf`	Simulation of the Usage of Gaussian Mixture Models for the Purpose of Modelling Virtual Mass Spectrometry Data. MIE Malgorzata Plechawska, Joanna Polanska
2004	J	`jnl`	Estimating Regions of Absolute Stability with the Use of Piecewise Linear Lyapunov Functions. Eur. J. Control Zbigniew Starosolski, Joanna Polanska, Mark Groen, Andrzej Polanski