Joachim Selbig

56 papers A* 1B 2C 2Journal 39Unranked 10
YearRankTypeTitle / Venue / Authors
2016 J jnl
Phenomic prediction of maize hybrids.
Biosyst.
Christian Edlich-Muth, Moses Muraya, Thomas Altmann, Joachim Selbig
2015 J jnl
Refined elasticity sampling for Monte Carlo-based identification of stabilizing network patterns.
Bioinform.
Dorothee Childs, Sergio Grimbs, Joachim Selbig
2015 — conf
Towards a Graph-Theoretic Approach to Hybrid Performance Prediction from Large-Scale Phenotypic Data.
IPCAT
Alberto Castellini, Christian Edlich-Muth, Moses Muraya, Christian Klukas, Thomas Altmann, Joachim Selbig
2014 J jnl
Biological Cluster Evaluation for Gene Function Prediction.
J. Comput. Biol.
Sebastian Klie, Zoran Nikoloski, Joachim Selbig
2013 J jnl
Analysis of phylogenetic signal in protostomial intron patterns using Mutual Information.
Theory Biosci.
Natascha Hill, Alexander Leow, Christoph Bleidorn, Detlef Groth, Ralph Tiedemann, Joachim Selbig, Stefanie Hartmann
2012 J jnl
A MATLAB toolbox for structural kinetic modeling.
Bioinform.
Dorothee Girbig, Joachim Selbig, Sergio Grimbs
2012 J jnl
A distinct metabolic signature predicts development of fasting plasma glucose.
J. Clin. Bioinform.
Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinský, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas F. H. Pfeiffer, Lothar Willmitzer, Joachim Selbig, Joachim Spranger
2012 J jnl
F2C2: a fast tool for the computation of flux coupling in genome-scale metabolic networks.
BMC Bioinform.
Abdelhalim Larhlimi, László Dávid, Joachim Selbig, Alexander Bockmayr
2012 J jnl
Stoichiometric capacitance reveals the theoretical capabilities of metabolic networks.
Bioinform.
Abdelhalim Larhlimi, Georg Basler, Sergio Grimbs, Joachim Selbig, Zoran Nikoloski
2012 — conf
Tailored Strategies for the Analysis of Metabolomic Data.
IPCAT
Kristen Feher, Kathrin Jürchott, Joachim Selbig
2011 J jnl
Comparison of metabolite profiles in U87 glioma cells and mesenchymal stem cells.
Biosyst.
Kathrin Jürchott, Ke-Tai Guo, Gareth Catchpole, Kristen Feher, Lothar Willmitzer, Christian Schichor, Joachim Selbig
2011 J jnl
Complexity of automated gene annotation.
Biosyst.
Zoran Nikoloski, Sergio Grimbs, Sebastian Klie, Joachim Selbig
2011 J jnl
Mass-balanced randomization of metabolic networks.
Bioinform.
Georg Basler, Oliver Ebenhöh, Joachim Selbig, Zoran Nikoloski
2011 J jnl
Robustness of metabolic networks: A review of existing definitions.
Biosyst.
Abdelhalim Larhlimi, Sylvain Blachon, Joachim Selbig, Zoran Nikoloski
2011 J jnl
Spatiotemporal dynamics of the Calvin cycle: Multistationarity and symmetry breaking instabilities.
Biosyst.
Sergio Grimbs, Anne Arnold, Aneta Koseska, Jürgen Kurths, Joachim Selbig, Zoran Nikoloski
2010 J jnl
Biomarker discovery in heterogeneous tissue samples -taking the in-silico deconfounding approach.
BMC Bioinform.
Dirk Repsilber, Sabine Kern, Anna Telaar, Gerhard Walzl, Gillian F. Black, Joachim Selbig, Shreemanta K. Parida, Stefan H. E. Kaufmann, Marc Jacobsen
2010 J jnl
ExPlanes: Exploring Planes in Triplet Data.
J. Integr. Bioinform.
Bruno B. Schwenk, Joachim Selbig, Yehuda Ben-Zion, Matthias Holschneider
2009 J jnl
Detection and characterization of 3D-signature phosphorylation site motifs and their contribution towards improved phosphorylation site prediction in proteins.
BMC Bioinform.
Pawel Durek, Christian Schudoma, Wolfram Weckwerth, Joachim Selbig, Dirk Walther
2009 — conf
HIV-1 Drug Resistance Prediction and Therapy Optimization: A Case Study for the Application of Classification and Clustering Methods.
Similarity-Based Clustering
Michal Rosen-Zvi, Ehud Aharoni, Joachim Selbig
2009 J jnl
Network Structure and Biological Function: Reconstruction, Modeling, and Statistical Approaches.
EURASIP J. Bioinform. Syst. Biol.
Joachim Selbig, Matthias Steinfath, Dirk Repsilber
2008 C conf
Hardness and Approximability of the Inverse Scope Problem.
WABI
Zoran Nikoloski, Sergio Grimbs, Joachim Selbig, Oliver Ebenhöh
2008 J jnl
Modeling Biological Networks by Action Languages via Answer Set Programming.
Constraints An Int. J.
Steve Dworschak, Susanne Grell, Victoria J. Nikiforova, Torsten Schaub, Joachim Selbig
2007 J jnl
From structure to dynamics of metabolic pathways: application to the plant mitochondrial TCA cycle.
Bioinform.
Ralf Steuer, Adriano Nunes Nesi, Alisdair R. Fernie, Thilo Gross, Bernd Blasius, Joachim Selbig
2007 J jnl
ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites.
BMC Bioinform.
Jan Hummel, Michaela Niemann, Stefanie Wienkoop, Waltraud X. Schulze, Dirk Steinhauser, Joachim Selbig, Dirk Walther, Wolfram Weckwerth
2007 — ed.
Proceedings of the German Conference on Bioinformatics, GCB 2007, September 26-28, 2007, Potsdam, Germany.
German Conference on Bioinformatics
Claudia Falter, Alexander Schliep, Joachim Selbig, Martin Vingron, Dirk Walther
2007 J jnl
Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana.
BMC Bioinform.
Henning Redestig, Daniel Weicht, Joachim Selbig, Matthew A. Hannah
2007 J jnl
pcaMethods - a bioconductor package providing PCA methods for incomplete data.
Bioinform.
Wolfram Stacklies, Henning Redestig, Matthias Scholz, Dirk Walther, Joachim Selbig
2006 — conf
Arevir: A Secure Platform for Designing Personalized Antiretroviral Therapies Against HIV.
DILS
Kirsten Roomp, Niko Beerenwinkel, Tobias Sing, Eugen Schülter, Joachim Büch, Saleta Sierra-Aragon, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig
2006 J jnl
Metabolite profiles as a reflection of physiological status -- a methodological validation.
J. Integr. Bioinform.
Matthias Steinfath, Dirk Repsilber, Manuela Hische, Nicolas Schauer, Alisdair R. Fernie, Joachim Selbig
2006 B conf
Modelling Biological Networks by Action Languages Via Answer Set Programming.
ICLP
Susanne Grell, Torsten Schaub, Joachim Selbig
2006 — conf
Unsupervised Decision Trees Structured by Gene Ontology (GO-UDTs) for the Interpretation of Microarray Data.
GfKl
Henning Redestig, Florian Sohler, Ralf Zimmer, Joachim Selbig
2006 J jnl
Validation and functional annotation of expression-based clusters based on gene ontology.
BMC Bioinform.
Ralf Steuer, Peter Humburg, Joachim Selbig
2005 J jnl
Computational methods for the design of effective therapies against drug resistant HIV strains.
Bioinform.
Niko Beerenwinkel, Tobias Sing, Thomas Lengauer, Jörg Rahnenführer, Kirsten Roomp, Igor Savenkov, Roman Fischer, Daniel Hoffmann, Joachim Selbig, Klaus Korn, Hauke Walter, Thomas Berg, Patrick Braun, Gerd Fätkenheuer, Mark Oette, Jürgen K. Rockstroh, Bernd Kupfer, Rolf Kaiser, Martin Däumer
2005 J jnl
Learning Multiple Evolutionary Pathways from Cross-Sectional Data.
J. Comput. Biol.
Niko Beerenwinkel, Jörg Rahnenführer, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer
2005 J jnl
Mtreemix: a software package for learning and using mixture models of mutagenetic trees.
Bioinform.
Niko Beerenwinkel, Jörg Rahnenführer, Rolf Kaiser, Daniel Hoffmann, Joachim Selbig, Thomas Lengauer
2005 J jnl
Non-linear PCA: a missing data approach.
Bioinform.
Matthias Scholz, Fatma Kaplan, Charles L. Guy, Joachim Kopka, Joachim Selbig
2005 J jnl
Species-specific analysis of protein sequence motifs using mutual information.
BMC Bioinform.
Jan Hummel, Nima Keshvari, Wolfram Weckwerth, Joachim Selbig
2004 J jnl
Estimating mutual information using B-spline functions - an improved similarity measure for analysing gene expression data.
BMC Bioinform.
Carsten O. Daub, Ralf Steuer, Joachim Selbig, Sebastian Kloska
2004 J jnl
Hypothesis-driven approach to predict transcriptional units from gene expression data.
Bioinform.
Dirk Steinhauser, Björn H. Junker, Alexander Lüdemann, Joachim Selbig, Joachim Kopka
2004 — conf
Independent components analysis of starch deficient
German Conference on Bioinformatics
Matthias Scholz, Yves Gibon, Mark Stitt, Joachim Selbig
2004 B conf
Learning multiple evolutionary pathways from cross-sectional data.
RECOMB
Niko Beerenwinkel, Jörg Rahnenführer, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer
2004 J jnl
Metabolite fingerprinting: detecting biological features by independent component analysis.
Bioinform.
Matthias Scholz, S. Gatzek, Alisdair R. Sterling, Oliver Fiehn, Joachim Selbig
2004 J jnl
PaVESy: Pathway Visualization and Editing System.
Bioinform.
Alexander Lüdemann, Daniel Weicht, Joachim Selbig, Joachim Kopka
2004 J jnl
Threshold extraction in metabolite concentration data.
Bioinform.
André Flöter, Jacques Nicolas, Torsten Schaub, Joachim Selbig
2003 J jnl
Geno2pheno: estimating phenotypic drug resistance from HIV-1 genotypes.
Nucleic Acids Res.
Niko Beerenwinkel, Martin Däumer, Mark Oette, Klaus Korn, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig, Hauke Walter
2003 J jnl
MetaGeneAlyse: analysis of integrated transcriptional and metabolite data.
Bioinform.
Carsten O. Daub, Sebastian Kloska, Joachim Selbig
2003 — conf
Methods for optimizing antiviral combination therapies.
ISMB (Supplement of Bioinformatics)
Niko Beerenwinkel, Thomas Lengauer, Martin Däumer, Rolf Kaiser, Hauke Walter, Klaus Korn, Daniel Hoffmann, Joachim Selbig
2003 — conf
Threshold extraction in metabolite concentration data.
German Conference on Bioinformatics
André Flöter, Jacques Nicolas, Torsten Schaub, Joachim Selbig
2002 J jnl
Diversity and complexity of HIV-1 drug resistance: A bioinformatics approach to predicting phenotype from genotype.
Proc. Natl. Acad. Sci. USA
Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig
2002 C conf
The mutual information: Detecting and evaluating dependencies between variables.
ECCB
Ralph E. Steuer, Jürgen Kurths, Carsten O. Daub, Janko Weise, Joachim Selbig
2001 J jnl
Geno2pheno: Interpreting Genotypic HIV Drug Resistance Tests.
IEEE Intell. Syst.
Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig
2001 — conf
Identifying drug resistance-associated patterns in HIV genotypes.
German Conference on Bioinformatics
Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig
1999 J jnl
Decision tree-based formation of consensus protein secondary structure prediction.
Bioinform.
Joachim Selbig, Heinz-Theodor Mevissen, Thomas Lengauer
1988 — —
Zum automatischen Erlernen von Beschreibungen für Klassen von Veränderungen strukturierter Objekte aus Beispielen.
Joachim Selbig
1986 — conf
Knowledge Acquisition by Inductive Learning from Examples.
AII
Joachim Selbig
1981 A* conf
Concept Learning by Structured Examples - An Algebraic Approach.
IJCAI
Fritz Wysotzki, Werner Kolbe, Joachim Selbig