Jinyan Li - RankMe

182 papers A* 10A 6B 23C 6Misc 3Journal 97Unranked 26

Year	Rank	Type	Title / Venue / Authors
2024	B	`conf`	An Ontology-based Three-Stage Approach to Medical Text classification with Feature Selection by Particle Swarm Optimisation. KES Mahdi Abdollahi, Xiaoying Gao, Yi Mei, Shameek Ghosh, Jinyan Li, Michael Narag
2024	J	`jnl`	Generating mutants of monotone affinity towards stronger protein complexes through adversarial learning. Nat. Mac. Intell. Tian Lan, Shuquan Su, Pengyao Ping, Gyorgy Hutvagner, Tao Liu, Yi Pan, Jinyan Li
2023	J	`jnl`	ARDE-N-BEATS: An Evolutionary Deep Learning Framework for Urban Traffic Flow Prediction. IEEE Internet Things J. Xiaocai Zhang, Zhixun Zhao, Jinyan Li
2022	J	`jnl`	Detection of spam reviews through a hierarchical attention architecture with N-gram CNN and Bi-LSTM. Inf. Syst. Yuxin Liu, Li Wang, Tengfei Shi, Jinyan Li
2021	J	`jnl`	Deep learning detection of anomalous patterns from bus trajectories for traffic insight analysis. Knowl. Based Syst. Xiaocai Zhang, Yi Zheng, Zhixun Zhao, Yuansheng Liu, Michael Blumenstein, Jinyan Li
2021	J	`jnl`	FUNMarker: Fusion Network-Based Method to Identify Prognostic and Heterogeneous Breast Cancer Biomarkers. IEEE ACM Trans. Comput. Biol. Bioinform. Xingyi Li, Ju Xiang, Jianxin Wang, Jinyan Li, Fang-Xiang Wu, Min Li
2021	J	`jnl`	Genetic source completeness of HIV-1 circulating recombinant forms (CRFs) predicted by multi-label learning. Bioinform. Runbin Tang, Zuguo Yu, Yuanlin Ma, Yaoqun Wu, Yi-Ping Phoebe Chen, Limsoon Wong, Jinyan Li
2021	J	`jnl`	Multigene editing: current approaches and beyond. Briefings Bioinform. Hui Peng, Yi Zheng, Zhixun Zhao, Jinyan Li
2021	J	`jnl`	Sequencing dropout-and-batch effect normalization for single-cell mRNA profiles: a survey and comparative analysis. Briefings Bioinform. Tian Lan, Gyorgy Hutvagner, Qing Lan, Tao Liu, Jinyan Li
2021	J	`jnl`	Single-cell multi-omics sequencing: application trends, COVID-19, data analysis issues and prospects. Briefings Bioinform. Lu Huo, Jiao Jiao Li, Ling Chen, Zuguo Yu, Gyorgy Hutvagner, Jinyan Li
2021	J	`jnl`	Substituting clinical features using synthetic medical phrases: Medical text data augmentation techniques. Artif. Intell. Medicine Mahdi Abdollahi, Xiaoying Gao, Yi Mei, Shameek Ghosh, Jinyan Li, Michael Narag
2021	J	`jnl`	Transformation of FASTA files into feature vectors for unsupervised compression of short reads databases. J. Bioinform. Comput. Biol. Tao Tang, Jinyan Li
2020	—	`conf`	A Dictionary-based Oversampling Approach to Clinical Document Classification on Small and Imbalanced Dataset. WI/IAT Mahdi Abdollahi, Xiaoying Gao, Yi Mei, Shameek Ghosh, Jinyan Li
2020	J	`jnl`	Allowing mutations in maximal matches boosts genome compression performance. Bioinform. Yuansheng Liu, Limsoon Wong, Jinyan Li
2020	J	`jnl`	Bi-Level Error Correction for PacBio Long Reads. IEEE ACM Trans. Comput. Biol. Bioinform. Yuansheng Liu, Chaowang Lan, Michael Blumenstein, Jinyan Li
2020	J	`jnl`	Guest Editorial for the 29th International Conference on Genome Informatics (GIW 2018). IEEE ACM Trans. Comput. Biol. Bioinform. Jie Zheng, Jinyan Li, Yun Zheng
2020	B	`conf`	Ontology-Guided Data Augmentation for Medical Document Classification. AIME Mahdi Abdollahi, Xiaoying Gao, Yi Mei, Shameek Ghosh, Jinyan Li
2020	J	`jnl`	Prediction of Taxi Destinations Using a Novel Data Embedding Method and Ensemble Learning. IEEE Trans. Intell. Transp. Syst. Xiaocai Zhang, Zhixun Zhao, Yi Zheng, Jinyan Li
2019	B	`conf`	An Ontology-based Two-Stage Approach to Medical Text Classification with Feature Selection by Particle Swarm Optimisation. CEC Mahdi Abdollahi, Xiaoying Gao, Yi Mei, Shameek Ghosh, Jinyan Li
2019	J	`jnl`	DDI-PULearn: a positive-unlabeled learning method for large-scale prediction of drug-drug interactions. BMC Bioinform. Yi Zheng, Hui Peng, Xiaocai Zhang, Zhixun Zhao, Xiaoying Gao, Jinyan Li
2019	—	`conf`	Detection of Anomalous Traffic Patterns and Insight Analysis from Bus Trajectory Data. PRICAI (3) Xiaocai Zhang, Xuan Zhang, Sunny Verma, Yuansheng Liu, Michael Blumenstein, Jinyan Li
2019	J	`jnl`	Fast detection of maximal exact matches via fixed sampling of query K-mers and Bloom filtering of index K-mers. Bioinform. Yuansheng Liu, Leo Yu Zhang, Jinyan Li
2019	J	`jnl`	Index suffix-prefix overlaps by (w, k)-minimizer to generate long contigs for reads compression. Bioinform. Yuansheng Liu, Zu-Guo Yu, Marcel E. Dinger, Jinyan Li
2019	J	`jnl`	Inverse similarity and reliable negative samples for drug side-effect prediction. BMC Bioinform. Yi Zheng, Hui Peng, Shameek Ghosh, Chaowang Lan, Jinyan Li
2019	J	`jnl`	Old drug repositioning and new drug discovery through similarity learning from drug-target joint feature spaces. BMC Bioinform. Yi Zheng, Hui Peng, Xiaocai Zhang, Zhixun Zhao, Xiaoying Gao, Jinyan Li
2019	J	`jnl`	Sequence-based prediction of protein-protein interaction sites by simplified long short-term memory network. Neurocomputing Buzhong Zhang, Jinyan Li, Lijun Quan, Yu Chen, Qiang Lü
2019	—	`conf`	Stratifying Risk of Coronary Artery Disease Using Discriminative Knowledge-Guided Medical Concept Pairings from Clinical Notes. PRICAI (3) Mahdi Abdollahi, Xiaoying Gao, Yi Mei, Shameek Ghosh, Jinyan Li
2018	—	`ch.`	Applications of Emerging Patterns for Microarray Gene Expression Data Analysis. Encyclopedia of Database Systems (2nd ed.) Guozhu Dong, Jinyan Li
2018	J	`jnl`	CRISPR/Cas9 cleavage efficiency regression through boosting algorithms and Markov sequence profiling. Bioinform. Hui Peng, Yi Zheng, Michael Blumenstein, Dacheng Tao, Jinyan Li
2018	B	`conf`	Connectivity Based Method for Clustering Microbial Communities from Metagenomics Data of Water and Soil Samples. IJCNN Jessica S. Rahman, Jinyan Li, Juanying Xie, Shoshana Fogelman, Michael Blumenstein
2018	J	`jnl`	Discovering pan-correlation patterns from time course data sets by efficient mining algorithms. Computing Qian Liu, Shameek Ghosh, Jinyan Li, Limsoon Wong, Kotagiri Ramamohanarao
2018	—	`conf`	Distinction Between Ships and Icebergs in SAR Images Using Ensemble Loss Trained Convolutional Neural Networks. Australasian Conference on Artificial Intelligence Xiaocai Zhang, Yuansheng Liu, Yi Zheng, Zhixun Zhao, Jinyan Li, Yang Liu
2018	—	`ch.`	Emerging Pattern Based Classification. Encyclopedia of Database Systems (2nd ed.) Guozhu Dong, Jinyan Li
2018	—	`ch.`	Emerging Patterns. Encyclopedia of Database Systems (2nd ed.) Guozhu Dong, Jinyan Li
2018	J	`jnl`	Hot spot prediction in protein-protein interactions by an ensemble system. BMC Syst. Biol. Quanya Liu, Peng Chen, Bing Wang, Jun Zhang, Jinyan Li
2018	J	`jnl`	Identification of pre-microRNAs by characterizing their sequence order evolution information and secondary structure graphs. BMC Bioinform. Yuanlin Ma, Zu-Guo Yu, Guo-Sheng Han, Jinyan Li, Vo Anh
2018	J	`jnl`	Introduction to Selected Papers from GIW2018. J. Bioinform. Comput. Biol. Jinyan Li, Kenta Nakai, Yun Zheng, Kengo Sato, Limsoon Wong
2018	J	`jnl`	Novel overlapping subgraph clustering for the detection of antigen epitopes. Bioinform. Liang Zhao, Shaogui Wu, Jiawen Jiang, Wencui Li, Jie Luo, Jinyan Li
2018	B	`conf`	Predicting Drug Targets from Heterogeneous Spaces using Anchor Graph Hashing and Ensemble Learning. IJCNN Yi Zheng, Hui Peng, Xiaocai Zhang, Xiaoying Gao, Jinyan Li
2018	J	`jnl`	Predicting adverse drug reactions of combined medication from heterogeneous pharmacologic databases. BMC Bioinform. Yi Zheng, Hui Peng, Xiaocai Zhang, Zhixun Zhao, Jie Yin, Jinyan Li
2018	J	`jnl`	Prediction of 8-state protein secondary structures by a novel deep learning architecture. BMC Bioinform. Buzhong Zhang, Jinyan Li, Qiang Lü
2018	J	`jnl`	Recognition of CRISPR/Cas9 off-target sites through ensemble learning of uneven mismatch distributions. Bioinform. Hui Peng, Yi Zheng, Zhixun Zhao, Tao Liu, Jinyan Li
2018	—	`conf`	Uncovering Discriminative Knowledge-Guided Medical Concepts for Classifying Coronary Artery Disease Notes. Australasian Conference on Artificial Intelligence Mahdi Abdollahi, Xiaoying Gao, Yi Mei, Shameek Ghosh, Jinyan Li
2018	B	`conf`	Version Space Completeness for Novel Hypothesis Induction in Biomedical Applications. IJCNN Jinyan Li
2018	J	`jnl`	dbMPIKT: a database of kinetic and thermodynamic mutant protein interactions. BMC Bioinform. Quanya Liu, Peng Chen, Bing Wang, Jun Zhang, Jinyan Li
2017	—	`conf`	An Optimized Drug Similarity Framework for Side-effect Prediction. CinC Yi Zheng, Shameek Ghosh, Jinyan Li
2017	J	`jnl`	Cross disease analysis of co-functional microRNA pairs on a reconstructed network of disease-gene-microRNA tripartite. BMC Bioinform. Hui Peng, Chaowang Lan, Yi Zheng, Gyorgy Hutvagner, Dacheng Tao, Jinyan Li
2017	J	`jnl`	Exploring Consensus RNA Substructural Patterns Using Subgraph Mining. IEEE ACM Trans. Comput. Biol. Bioinform. Qingfeng Chen, Chaowang Lan, Baoshan Chen, Lusheng Wang, Jinyan Li, Chengqi Zhang
2017	J	`jnl`	High-speed and high-ratio referential genome compression. Bioinform. Yuansheng Liu, Hui Peng, Limsoon Wong, Jinyan Li
2017	J	`jnl`	MapReduce for accurate error correction of next-generation sequencing data. Bioinform. Liang Zhao, Qingfeng Chen, Wencui Li, Peng Jiang, Limsoon Wong, Jinyan Li
2017	J	`jnl`	Septic shock prediction for ICU patients via coupled HMM walking on sequential contrast patterns. J. Biomed. Informatics Shameek Ghosh, Jinyan Li, Longbing Cao, Kotagiri Ramamohanarao
2017	J	`jnl`	Staged heterogeneity learning to identify conformational B-cell epitopes from antigen sequences. BMC Genom. Jing Ren, Jiangning Song, John T. Ellis, Jinyan Li
2017	B	`conf`	Structure embedding for knowledge base completion and analytics. IJCNN Zili Zhou, Guandong Xu, Wenhao Zhu, Jinyan Li, Wu Zhang
2017	J	`jnl`	Using propensity scores to predict the kinases of unannotated phosphopeptides. Knowl. Based Syst. Qingfeng Chen, Yiqi Wang, Baoshan Chen, Chengqi Zhang, Lusheng Wang, Jinyan Li
2016	J	`jnl`	A Sequence-Based Dynamic Ensemble Learning System for Protein Ligand-Binding Site Prediction. IEEE ACM Trans. Comput. Biol. Bioinform. Peng Chen, Shanshan Hu, Jun Zhang, Xin Gao, Jinyan Li, Junfeng Xia, Bing Wang
2016	—	`conf`	Coordinating Discernibility and Independence Scores of Variables in a 2D Space for Efficient and Accurate Feature Selection. ICIC (3) Juanying Xie, Mingzhao Wang, Ying Zhou, Jinyan Li
2016	—	`conf`	Depth-First Search Encoding of RNA Substructures. ICIC (1) Qingfeng Chen, Chaowang Lan, Jinyan Li, Baoshan Chen, Lusheng Wang, Chengqi Zhang
2016	C	`conf`	Deriving Public Sector Workforce Insights: A Case Study Using Australian Public Sector Employment Profiles. ADMA Shameek Ghosh, Yi Zheng, Thorsten Lammers, Ying-Ying Chen, Carolyn Fitzmaurice, Scott Johnston, Jinyan Li
2016	C	`conf`	Efficient Mining of Pan-Correlation Patterns from Time Course Data. ADMA Qian Liu, Jinyan Li, Limsoon Wong, Kotagiri Ramamohanarao
2016	J	`jnl`	Estimation of NON-WSSUS Channel for OFDM System: Exploiting Support Correlations through a Novel Adaptive Weighted Predict-Re-Estimate L1 Minimization. J. Commun. Chen Wang, Yong Fang, Jinyan Li
2016	J	`jnl`	Grouping miRNAs of similar functions via weighted information content of gene ontology. BMC Bioinform. Chaowang Lan, Qingfeng Chen, Jinyan Li
2016	J	`jnl`	Hypotension Risk Prediction via Sequential Contrast Patterns of ICU Blood Pressure. IEEE J. Biomed. Health Informatics Shameek Ghosh, Mengling Feng, Hung T. Nguyen, Jinyan Li
2016	—	`conf`	Predicting short-term ICU outcomes using a sequential contrast motif based classification framework. EMBC Shameek Ghosh, Hung T. Nguyen, Jinyan Li
2016	—	`ed.`	Trends and Applications in Knowledge Discovery and Data Mining - PAKDD 2016 Workshops, BDM, MLSDA, PACC, WDMBF Auckland, New Zealand, April 19, 2016, Revised Selected Papers PAKDD Workshops Huiping Cao, Jinyan Li, Ruili Wang
2016	—	`conf`	Using constrained information entropy to detect rare adverse drug reactions from medical forums. EMBC Yi Zheng, Chaowang Lan, Hui Peng, Jinyan Li
2015	J	`jnl`	Automatic classification for field crop insects via multiple-task sparse representation and multiple-kernel learning. Comput. Electron. Agric. Chengjun Xie, Jie Zhang, Rui Li, Jinyan Li, Peilin Hong, Junfeng Xia, Peng Chen
2015	J	`jnl`	Burial Level Change Defines a High Energetic Relevance for Protein Binding Interfaces. IEEE ACM Trans. Comput. Biol. Bioinform. Zhenhua Li, Ying He, Limsoon Wong, Jinyan Li
2015	J	`jnl`	Connecting rules from paired miRNA and mRNA expression data sets of HCV patients to detect both inverse and positive regulatory relationships. BMC Genom. Renhua Song, Qian Liu, Tao Liu, Jinyan Li
2015	J	`jnl`	Laplacian normalization and random walk on heterogeneous networks for disease-gene prioritization. Comput. Biol. Chem. Zhi-Qin Zhao, Guo-Sheng Han, Zu-Guo Yu, Jinyan Li
2014	J	`jnl`	Bird Flu Outbreak Prediction via Satellite Tracking. IEEE Intell. Syst. Yuanchun Zhou, Mingjie Tang, Weike Pan, Jinyan Li, Weihang Wang, Jing Shao, Liang Wu, Jianhui Li, Qiang Yang, Baoping Yan
2014	J	`jnl`	Coupling Graphs, Efficient Algorithmsand B-Cell Epitope Prediction. IEEE ACM Trans. Comput. Biol. Bioinform. Liang Zhao, Steven C. H. Hoi, Zhenhua Li, Limsoon Wong, Hung T. Nguyen, Jinyan Li
2014	—	`conf`	Geodesic Voronoi Diagrams with Polyline Generators. SGP Posters Chunxu Xu, Yong-Jin Liu, Qian Sun, Jinyan Li, Ying He
2014	J	`jnl`	Influenza A HA's conserved epitopes and broadly neutralizing antibodies: A prediction method. J. Bioinform. Comput. Biol. Jing Ren, John T. Ellis, Jinyan Li
2014	J	`jnl`	Integrating water exclusion theory into βcontacts to predict binding free energy changes and binding hot spots. BMC Bioinform. Qian Liu, Steven C. H. Hoi, Chee Keong Kwoh, Limsoon Wong, Jinyan Li
2014	A	`conf`	Modeling Asymmetry and Tail Dependence among Multiple Variables by Using Partial Regular Vine. SDM Wei Wei, Junfu Yin, Jinyan Li, Longbing Cao
2014	J	`jnl`	PPI-IRO: a two-stage method for protein-protein interaction extraction based on interaction relation ontology. Int. J. Data Min. Bioinform. Chuanxi Li, Peng Chen, Rujing Wang, Xiu-Jie Wang, Yaru Su, Jinyan Li
2014	J	`jnl`	Polyline-sourced Geodesic Voronoi Diagrams on Triangle Meshes. Comput. Graph. Forum Chunxu Xu, Yong-Jin Liu, Qian Sun, Jinyan Li, Ying He
2014	—	`conf`	Predicting Heart Beats using Co-occurring Constrained Sequential Patterns. CinC Shameek Ghosh, Mengling Feng, Hung T. Nguyen, Jinyan Li
2014	Misc	`conf`	Risk Prediction for Acute Hypotensive Patients by Using Gap Constrained Sequential Contrast Patterns. AMIA Shameek Ghosh, Mengling Feng, Hung T. Nguyen, Jinyan Li
2014	J	`jnl`	Tertiary structure-based prediction of conformational B-cell epitopes through B factors. Bioinform. Jing Ren, Qian Liu, John T. Ellis, Jinyan Li
2014	J	`jnl`	Use B-factor related features for accurate classification between protein binding interfaces and crystal packing contacts. BMC Bioinform. Qian Liu, Zhenhua Li, Jinyan Li
2013	—	`conf`	A seven-core photonic crystal fiber with high beam quality. OFC/NFOEC Huifeng Wei, Gelin Zhang, Peiguang Yan, Jiang Li, Xinben Zhang, Weijun Tong, Jie Luo, Jinyan Li, Kangkang Chen
2013	J	`jnl`	Binding Affinity Prediction for Protein-Ligand Complexes Based on J. Chem. Inf. Model. Qian Liu, Chee Keong Kwoh, Jinyan Li
2013	—	`ch.`	Emerging Pattern Based Rules Characterizing Subtypes of Leukemia. Contrast Data Mining Jinyan Li, Limsoon Wong
2013	—	`conf`	Optimal Allocation of High Dimensional Assets through Canonical Vines. PAKDD (1) Wei Wei, Jinyan Li, Longbing Cao, Jingguang Sun, Chunming Liu, Mu Li
2013	J	`jnl`	Structural analysis on mutation residues and interfacial water molecules for human TIM disease understanding. BMC Bioinform. Zhenhua Li, Ying He, Qian Liu, Liang Zhao, Limsoon Wong, Chee Keong Kwoh, Hung T. Nguyen, Jinyan Li
2012	J	`jnl`	B-cell epitope prediction through a graph model. BMC Bioinform. Liang Zhao, Limsoon Wong, Lanyuan Lu, Steven C. H. Hoi, Jinyan Li
2012	J	`jnl`	Conservation of water molecules in protein binding interfaces. Int. J. Bioinform. Res. Appl. Zhenhua Li, Ying He, Longbing Cao, Limsoon Wong, Jinyan Li
2012	J	`jnl`	Detection of Outlier Residues for Improving Interface Prediction in Protein Heterocomplexes. IEEE ACM Trans. Comput. Biol. Bioinform. Peng Chen, Limsoon Wong, Jinyan Li
2012	A	`conf`	Model the complex dependence structures of financial variables by using canonical vine. CIKM Wei Wei, Xuhui Fan, Jinyan Li, Longbing Cao
2012	J	`jnl`	Progressive dry-core-wet-rim hydration trend in a nested-ring topology of protein binding interfaces. BMC Bioinform. Zhenhua Li, Ying He, Limsoon Wong, Jinyan Li
2011	J	`jnl`	A case study on financial ratios via cross-graph quasi-bicliques. Inf. Sci. Kelvin Sim, Guimei Liu, Vivekanand Gopalkrishnan, Jinyan Li
2011	J	`jnl`	Antibody-Specified B-Cell Epitope Prediction in Line with the Principle of Context-Awareness. IEEE ACM Trans. Comput. Biol. Bioinform. Liang Zhao, Limsoon Wong, Jinyan Li
2011	J	`jnl`	DBAC: A simple prediction method for protein binding hot spots based on burial levels and deeply buried atomic contacts. BMC Syst. Biol. Zhenhua Li, Limsoon Wong, Jinyan Li
2011	J	`jnl`	Exploring the wild birds' migration data for the disease spread study of H5N1: a clustering and association approach. Knowl. Inf. Syst. Mingjie Tang, Yuanchun Zhou, Jinyan Li, Weihang Wang, Peng Cui, YuanSheng Hou, Ze Luo, Jianhui Li, Fuming Lei, Baoping Yan
2011	J	`jnl`	Mining Iterative Generators and Representative Rules for Software Specification Discovery. IEEE Trans. Knowl. Data Eng. David Lo, Jinyan Li, Limsoon Wong, Siau-Cheng Khoo
2011	J	`jnl`	Structural analysis of the hot spots in the binding between H1N1 HA and the 2D1 antibody: do mutations of H1N1 from 1918 to 2009 affect much on this binding? Bioinform. Qian Liu, Steven C. H. Hoi, Chinh T. T. Su, Zhenhua Li, Chee Keong Kwoh, Limsoon Wong, Jinyan Li
2010	—	`conf`	Birds Bring Flues? Mining Frequent and High Weighted Cliques from Birds Migration Networks. DASFAA (2) Mingjie Tang, Weihang Wang, Yexi Jiang, Yuanchun Zhou, Jinyan Li, Peng Cui, Ying Liu, Baoping Yan
2010	J	`jnl`	Discovering conditional co-regulated protein complexes by integrating diverse data sources. BMC Syst. Biol. Fei Luo, Juan Liu, Jinyan Li
2010	J	`jnl`	Insights into Bacterial Genome Composition through Variable Target GC Content Profiling. J. Comput. Biol. Scott Mann, Jinyan Li, Yi-Ping Phoebe Chen
2010	J	`jnl`	Modeling Protein Interacting Groups by Quasi-Bicliques: Complexity, Algorithm, and Application. IEEE ACM Trans. Comput. Biol. Bioinform. Xiaowen Liu, Jinyan Li, Lusheng Wang
2010	A*	`conf`	Negative correlations in collaboration: concepts and algorithms. KDD Jinyan Li, Qian Liu, Tao Zeng
2010	J	`jnl`	Pattern Space Maintenance for Data Updates and Interactive Mining. Comput. Intell. Mengling Feng, Guozhu Dong, Jinyan Li, Yap-Peng Tan, Limsoon Wong
2010	J	`jnl`	Protein binding hot spots and the residue-residue pairing preference: a water exclusion perspective. BMC Bioinform. Qian Liu, Jinyan Li
2010	J	`jnl`	Sequence-based identification of interface residues by an integrative profile combining hydrophobic and evolutionary information. BMC Bioinform. Peng Chen, Jinyan Li
2009	J	`jnl`	'Double water exclusion': a hypothesis refining the O-ring theory for the hot spots at protein interfaces. Bioinform. Jinyan Li, Qian Liu
2009	—	`ch.`	Applications of Emerging Patterns for Microarray Gene Expression Data Analysis. Encyclopedia of Database Systems Guozhu Dong, Jinyan Li
2009	C	`conf`	Discovery of Migration Habitats and Routes of Wild Bird Species by Clustering and Association Analysis. ADMA Mingjie Tang, Yuanchun Zhou, Peng Cui, Weihang Wang, Jinyan Li, Haiting Zhang, YuanSheng Hou, Baoping Yan
2009	—	`ch.`	Discovery of Protein Interaction Sites. Encyclopedia of Data Warehousing and Mining Haiquan Li, Jinyan Li, Xuechun Zhao
2009	J	`jnl`	Efficient mining of distance-based subspace clusters. Stat. Anal. Data Min. Guimei Liu, Kelvin Sim, Jinyan Li, Limsoon Wong
2009	—	`ch.`	Emerging Pattern Based Classification. Encyclopedia of Database Systems Guozhu Dong, Jinyan Li
2009	—	`ch.`	Emerging Patterns. Encyclopedia of Database Systems Guozhu Dong, Jinyan Li
2009	—	`conf`	High Functional Coherence in k-Partite Protein Cliques of Protein Interaction Networks. BIBM Qian Liu, Yi-Ping Phoebe Chen, Jinyan Li
2009	J	`jnl`	Mining maximal quasi-bicliques: Novel algorithm and applications in the stock market and protein networks. Stat. Anal. Data Min. Kelvin Sim, Jinyan Li, Vivekanand Gopalkrishnan, Guimei Liu
2009	J	`jnl`	PADS: a simple yet effective pattern-aware dynamic search method for fast maximal frequent pattern mining. Knowl. Inf. Syst. Xinghuo Zeng, Jian Pei, Ke Wang, Jinyan Li
2008	J	`jnl`	A new concise representation of frequent itemsets using generators and a positive border. Knowl. Inf. Syst. Guimei Liu, Jinyan Li, Limsoon Wong
2008	B	`conf`	Interacting Amino Acid Preferences of 3D Pattern Pairs at the Binding Sites of Transient and Obligate Protein Complexes. APBC Suryani Lukman, Kelvin Sim, Jinyan Li, Yi-Ping Phoebe Chen
2008	A	`conf`	Maximal Quasi-Bicliques with Balanced Noise Tolerance: Concepts and Co-clustering Applications. SDM Jinyan Li, Kelvin Sim, Guimei Liu, Limsoon Wong
2008	A	`conf`	Mining and Ranking Generators of Sequential Patterns. SDM David Lo, Siau-Cheng Khoo, Jinyan Li
2008	C	`conf`	Negative Generator Border for Effective Pattern Maintenance. ADMA Mengling Feng, Jinyan Li, Limsoon Wong, Yap-Peng Tan
2008	Misc	`conf`	Quasi-bicliques: Complexity and Binding Pairs. COCOON Xiaowen Liu, Jinyan Li, Lusheng Wang
2007	—	`conf`	Discovering Patterns of DNA Methylation: Rule Mining with Rough Sets and Decision Trees, and Comethylation Analysis. PReMI Ben Niu, Qiang Yang, Jinyan Li, Shiu Chi-keung, Sankar K. Pal
2007	A*	`conf`	Distance Based Subspace Clustering with Flexible Dimension Partitioning. ICDE Guimei Liu, Jinyan Li, Kelvin Sim, Limsoon Wong
2007	—	`ed.`	Emerging Technologies in Knowledge Discovery and Data Mining, PAKDD 2007, International Workshops, Nanjing, China, May 22-25, 2007, Revised Selected Papers PAKDD Workshops Takashi Washio, Zhi-Hua Zhou, Joshua Zhexue Huang, Xiaohua Hu, Jinyan Li, Chao Xie, Jieyue He, Deqing Zou, Kuan-Ching Li, Mário M. Freire
2007	B	`conf`	Evolution and Maintenance of Frequent Pattern Space When Transactions Are Removed. PAKDD Mengling Feng, Guozhu Dong, Jinyan Li, Yap-Peng Tan, Limsoon Wong
2007	J	`jnl`	Maximal Biclique Subgraphs and Closed Pattern Pairs of the Adjacency Matrix: A One-to-One Correspondence and Mining Algorithms. IEEE Trans. Knowl. Data Eng. Jinyan Li, Guimei Liu, Haiquan Li, Limsoon Wong
2007	A*	`conf`	Mining statistically important equivalence classes and delta-discriminative emerging patterns. KDD Jinyan Li, Guimei Liu, Limsoon Wong
2007	B	`conf`	Multidimensional Decision Support Indicator (mDSI) for Time Series Stock Trend Prediction. PAKDD Kuralmani Vellaisamy, Jinyan Li
2007	J	`jnl`	Strong Compound-Risk Factors: Efficient Discovery Through Emerging Patterns and Contrast Sets. IEEE Trans. Inf. Technol. Biomed. Jinyan Li, Qiang Yang
2007	—	`conf`	Workshop BioDM'07 - An Overview. PAKDD Workshops Jinyan Li, Xiaohua Hu
2006	B	`conf`	Bayesian Approaches to Ranking Sequential Patterns Interestingness. PRICAI Kuralmani Vellaisamy, Jinyan Li
2006	B	`conf`	COWES: Clustering Web Users Based on Historical Web Sessions. DASFAA Ling Chen, Sourav S. Bhowmick, Jinyan Li
2006	—	`ed.`	Data Mining for Biomedical Applications, PAKDD 2006 Workshop, BioDM 2006, Singapore, April 9, 2006, Proceedings BioDM Jinyan Li, Qiang Yang, Ah-Hwee Tan
2006	J	`jnl`	Discovering motif pairs at interaction sites from protein sequences on a proteome-wide scale. Bioinform. Haiquan Li, Jinyan Li, Limsoon Wong
2006	B	`conf`	Efficient Mining of Large Maximal Bicliques. DaWaK Guimei Liu, Kelvin Sim, Jinyan Li
2006	A*	`conf`	Minimum Description Length Principle: Generators Are Preferable to Closed Patterns. AAAI Jinyan Li, Haiquan Li, Limsoon Wong, Jian Pei, Guozhu Dong
2006	A*	`conf`	Mining Maximal Quasi-Bicliques to Co-Cluster Stocks and Financial Ratios for Value Investment. ICDM Kelvin Sim, Jinyan Li, Vivekanand Gopalkrishnan, Guimei Liu
2006	B	`conf`	Mining Temporal Indirect Associations. PAKDD Ling Chen, Sourav S. Bhowmick, Jinyan Li
2006	A	`conf`	Positive Borders or Negative Borders: How to Make Lossless Generator Based Representations Concise. SDM Guimei Liu, Jinyan Li, Limsoon Wong, Wynne Hsu
2005	—	`conf`	A Correspondence Between Maximal Complete Bipartite Subgraphs and Closed Patterns. PKDD Jinyan Li, Haiquan Li, Donny Soh, Limsoon Wong
2005	J	`jnl`	DNAFSMiner: a web-based software toolbox to recognize two types of functional sites in DNA sequences. Bioinform. Huiqing Liu, Hao Han, Jinyan Li, Limsoon Wong
2005	C	`conf`	Diagnostic Rules Induced by an Ensemble Method for Childhood Leukemia. BIBE Jinyan Li, Huiqing Liu, Ling Li
2005	J	`jnl`	Discovery of stable and significant binding motif pairs from PDB complexes and protein interaction datasets. Bioinform. Haiquan Li, Jinyan Li
2005	J	`jnl`	Efficient selection of discriminative genes from microarray gene expression data for cancer diagnosis. IEEE Trans. Circuits Syst. I Regul. Pap. Di Huang, Tommy W. S. Chow, Eden W. M. Ma, Jinyan Li
2005	J	`jnl`	Guest Editors' Introduction: Data Mining in Bioinformatics. IEEE Intell. Syst. Jinyan Li, Limsoon Wong, Qiang Yang
2005	B	`conf`	Mining Succinct Systems of Minimal Generators of Formal Concepts. DASFAA Guozhu Dong, Chunyu Jiang, Jian Pei, Jinyan Li, Limsoon Wong
2005	J	`jnl`	Mining border descriptions of emerging patterns from dataset pairs. Knowl. Inf. Syst. Guozhu Dong, Jinyan Li
2005	A*	`conf`	Relative risk and odds ratio: a data mining perspective. PODS Haiquan Li, Jinyan Li, Limsoon Wong, Mengling Feng, Yap-Peng Tan
2005	J	`jnl`	Structural geography of the space of emerging patterns. Intell. Data Anal. Jinyan Li, Limsoon Wong
2005	J	`jnl`	Use of extreme patient samples for outcome prediction from gene expression data. Bioinform. Huiqing Liu, Jinyan Li, Limsoon Wong
2005	J	`jnl`	Using Fixed Point Theorems to Model the Binding in Protein-Protein Interactions. IEEE Trans. Knowl. Data Eng. Jinyan Li, Haiquan Li
2004	B	`conf`	A Tree-Based Approach to the Discovery of Diagnostic Biomarkers for Ovarian Cancer. PAKDD Jinyan Li, Kotagiri Ramamohanarao
2004	J	`jnl`	DeEPs: A New Instance-Based Lazy Discovery and Classification System. Mach. Learn. Jinyan Li, Guozhu Dong, Kotagiri Ramamohanarao, Limsoon Wong
2004	Misc	`conf`	Discovery of Binding Motif Pairs from Protein Complex Structural Data and Protein Interaction Sequence Data. Pacific Symposium on Biocomputing Haiquan Li, Jinyan Li, Soon-Heng Tan, See-Kiong Ng
2004	J	`jnl`	Feature Space Transformation for Better Understanding Biological and Medical Classifications. J. Res. Pract. Inf. Technol. Jinyan Li, Hwee-Leng Ong
2004	J	`jnl`	Incremental Maintenance on the Border of the Space of Emerging Patterns. Data Min. Knowl. Discov. Jinyan Li, Thomas Manoukian, Guozhu Dong, Kotagiri Ramamohanarao
2004	—	`conf`	Selection of Patient Samples and Genes for Outcome Prediction. CSB Huiqing Liu, Jinyan Li, Limsoon Wong
2004	J	`jnl`	Twelve C2H2 zinc-finger genes on human chromosome 19 can be each translated into the same type of protein after frameshifts. Bioinform. Shao-Wu Meng, Zhuo Zhang, Jinyan Li
2004	B	`conf`	Use of Built-in Features in the Interpretation of High-dimensional Cancer Diagnosis Data.. APBC Jinyan Li, Huiqing Liu, Limsoon Wong
2004	J	`jnl`	Using amino acid patterns to accurately predict translation initiation sites. Silico Biol. Huiqing Liu, Hao Han, Jinyan Li, Limsoon Wong
2003	A	`conf`	Bioinformatics Adventures in Database Research. ICDT Jinyan Li, See-Kiong Ng, Limsoon Wong
2003	C	`conf`	Discovery of significant rules for classifying cancer diagnosis data. ECCB Jinyan Li, Huiqing Liu, See-Kiong Ng, Limsoon Wong
2003	A*	`conf`	Ensembles of Cascading Trees. ICDM Jinyan Li, Huiqing Liu
2003	B	`conf`	Feature Space Transformation and Decision Results Interpretation. APBC Jinyan Li, Hwee-Leng Ong
2003	B	`conf`	From Informatics to Bioinformatics. APBC Vladimir B. Bajic, Vladimir Brusic, Jinyan Li, See-Kiong Ng, Limsoon Wong
2003	—	`conf`	Mean-entropy discretized features are effective for classifying high-dimensional biomedical data. BIOKDD Jinyan Li, Huiqing Liu, Limsoon Wong
2003	J	`jnl`	Simple rules underlying gene expression profiles of more than six subtypes of acute lymphoblastic leukemia (ALL) patients. Bioinform. Jinyan Li, Huiqing Liu, James R. Downing, Allen Eng-Juh Yeoh, Limsoon Wong
2003	—	`conf`	Using Rules to Analyse Bio-medical Data: A Comparison between C4.5 and PCL. WAIM Jinyan Li, Limsoon Wong
2002	—	`conf`	Geography of Differences between Two Classes of Data. PKDD Jinyan Li, Limsoon Wong
2002	J	`jnl`	Identifying good diagnostic gene groups from gene expression profiles using the concept of emerging patterns . Bioinform. Jinyan Li, Limsoon Wong
2002	J	`jnl`	Identifying good diagnostic gene groups from gene expression profiles using the concept of emerging patterns. Bioinform. Jinyan Li, Limsoon Wong
2002	A*	`conf`	Solving the Fragmentation Problem of Decision Trees by Discovering Boundary Emerging Patterns. ICDM Jinyan Li, Limsoon Wong
2001	B	`conf`	Combining the Strength of Pattern Frequency and Distance for Classification. PAKDD Jinyan Li, Kotagiri Ramamohanarao, Guozhu Dong
2001	J	`jnl`	Making Use of the Most Expressive Jumping Emerging Patterns for Classification. Knowl. Inf. Syst. Jinyan Li, Guozhu Dong, Kotagiri Ramamohanarao
2000	—	`conf`	Emerging Patterns and Classification. ASIAN Jinyan Li, Kotagiri Ramamohanarao, Guozhu Dong
2000	—	`conf`	Instance-Based Classification by Emerging Patterns. PKDD Jinyan Li, Guozhu Dong, Kotagiri Ramamohanarao
2000	B	`conf`	Making Use of the Most Expressive Jumping Emerging Patterns for Classification. PAKDD Jinyan Li, Guozhu Dong, Kotagiri Ramamohanarao
2000	A*	`conf`	The Space of Jumping Emerging Patterns and Its Incremental Maintenance Algorithms. ICML Jinyan Li, Kotagiri Ramamohanarao, Guozhu Dong
1999	B	`conf`	CAEP: Classification by Aggregating Emerging Patterns. Discovery Science Guozhu Dong, Xiuzhen Zhang, Limsoon Wong, Jinyan Li
1999	A*	`conf`	Efficient Mining of Emerging Patterns: Discovering Trends and Differences. KDD Guozhu Dong, Jinyan Li
1999	—	`conf`	Efficient Mining of High Confidience Association Rules without Support Thresholds. PKDD Jinyan Li, Xiuzhen Zhang, Guozhu Dong, Kotagiri Ramamohanarao, Qun Sun
1998	B	`conf`	Interestingness of Discovered Association Rules in Terms of Neighborhood-Based Unexpectedness. PAKDD Guozhu Dong, Jinyan Li