Jintao Meng

41 papers A 5B 4C 3Journal 21Unranked 8
YearRankTypeTitle / Venue / Authors
2025 J jnl
A Comparative Study of Sequence Clustering Algorithms.
Big Data Min. Anal.
Zhen Ju, Huiling Zhang, Jingjing Zhang, Wenhui Xi, Dian Huang, Shengzhong Feng, Jintao Meng, Yanjie Wei
2025 A conf
A Sample-Free Compilation Framework for Efficient Dynamic Tensor Computation.
SC
Yangjie Zhou, Honglin Zhu, Qian Qiu, Weihao Cui, Zihan Liu, Peng Chen, Mohamed Wahib, Cong Guo, Siyuan Feng, Jintao Meng, Haidong Lan, Jingwen Leng, Yun Lin, Jin Song Dong, Wenxi Zhu, Minwen Deng
2025 — conf
An Efficient Parallel List Ranking Algorithm for Graph Concatenation on BSP Graph System.
ISBRA (2)
Maocheng Cao, Zhelang Deng, Qiucheng Miao, Jintao Meng, Yanjie Wei, Jiefeng Cheng
2025 J jnl
Attention-Guided Residual U-Net with SE Connection and ASPP for Watershed-Based Cell Segmentation in Microscopy Images.
J. Comput. Biol.
Jovial Niyogisubizo, Keliang Zhao, Jintao Meng, Yi Pan, Didi Rosiyadi, Yanjie Wei
2025 J jnl
CircRNA Profiles Analysis of Neuroblastoma for Identification of Drug Targets.
IEEE Trans. Comput. Biol. Bioinform.
Jingjing Zhang, Zhen Ju, Huiling Zhang, Haiping Zhang, Rui Zhou, Godfrey Chi-Fung Chan, Jintao Meng, Wenhui Xi, Yanjie Wei
2025 A conf
NM-SpMM: Accelerating Matrix Multiplication Using N: M Sparsity with GPGPU.
IPDPS
Cong Ma, Du Wu, Zhelang Deng, Jiang Chen, Xiaowen Huang, Jintao Meng, Wenxi Zhu, Bingqiang Wang, Amelie Chi Zhou, Peng Chen, Minwen Deng, Yanjie Wei, Shengzhong Feng, Yi Pan
2025 J jnl
NM-SpMM: Accelerating Matrix Multiplication Using N:M Sparsity with GPGPU.
CoRR
Cong Ma, Du Wu, Zhelang Deng, Jiang Chen, Xiaowen Huang, Jintao Meng, Wenxi Zhu, Bingqiang Wang, Amelie Chi Zhou, Peng Chen, Minwen Deng, Yanjie Wei, Shengzhong Feng, Yi Pan
2025 — conf
ParaCoder: Parallel Code Generation with Large Language Model.
FCPC@PPOPP
Xiaowen Huang, Xu Zhang, Lvfang Tao, Renjie Mao, Nan Zhou, Wenxi Zhu, Minwen Deng, Jintao Meng, Yanjie Wei, Amelie Chi Zhou, Bingqiang Wang, Shengzhong Feng
2025 — conf
Task-Adaptive Refined Reinforcement Learning with Granular Reward Shaping for Biomedical Information Extraction.
BIBM
Qiucheng Miao, Rui Zhou, Jintao Meng, Yanjie Wei
2024 — conf
An In-Depth Assessment of Sequence Clustering Software in Bioinformatics.
ISBRA (1)
Zhen Ju, Mingyu Wang, Xuelei Li, Jintao Meng, Wenhui Xi, Yanjie Wei
2024 J jnl
Autism Spectrum Disorder Classification with Interpretability in Children Based on Structural MRI Features Extracted Using Contrastive Variational Autoencoder.
Big Data Min. Anal.
Ruimin Ma, Ruitao Xie, Yanlin Wang, Jintao Meng, Yanjie Wei, Yunpeng Cai, Wenhui Xi, Yi Pan
2024 J jnl
Distributed Heterogeneous Spiking Neural Network Simulator Using Sunway Accelerators.
Big Data Min. Anal.
Xuelei Li, Zhichao Wang, Yi Pan, Jintao Meng, Shengzhong Feng, Yanjie Wei
2024 J jnl
OpenDock: a pytorch-based open-source framework for protein-ligand docking and modelling.
Bioinform.
Qiuyue Hu, Zechen Wang, Jintao Meng, Weifeng Li, Jingjing Guo, Yuguang Mu, Sheng Wang, Liangzhen Zheng, Yanjie Wei
2024 — conf
REXIO: Indexing for Low Write Amplification by Reducing Extra I/Os in Key-Value Store Under Mixed Read/Write Workloads.
WISE (1)
Zizhao Wang, Qiang Qu, Nan Han, Zhelang Deng, Yizhuo Ma, Xiaowen Huang, Jintao Meng
2024 J jnl
SeedHit: A GPU Friendly Pre-Align Filtering Algorithm.
IEEE ACM Trans. Comput. Biol. Bioinform.
Zhen Ju, Jingjing Zhang, Xuelei Li, Jintao Meng, Yanjie Wei
2024 J jnl
Vortex: Efficient Sample-Free Dynamic Tensor Program Optimization via Hardware-aware Strategy Space Hierarchization.
CoRR
Yangjie Zhou, Honglin Zhu, Qian Qiu, Weihao Cui, Zihan Liu, Cong Guo, Siyuan Feng, Jintao Meng, Haidong Lan, Jingwen Leng, Wenxi Zhu, Minwen Deng
2024 A conf
autoGEMM: Pushing the Limits of Irregular Matrix Multiplication on Arm Architectures.
SC
Du Wu, Jintao Meng, Wenxi Zhu, Minwen Deng, Xiao Wang, Tao Luo, Mohamed Wahib, Yanjie Wei
2023 J jnl
Autism Spectrum Disorder Classification in Children based on Structural MRI Features Extracted using Contrastive Variational Autoencoder.
CoRR
Ruimin Ma, Ruitao Xie, Yanlin Wang, Jintao Meng, Yanjie Wei, Wenhui Xi, Yi Pan
2023 — conf
Exploiting Scratchpad Memory for Deep Temporal Blocking: A case study for 2D Jacobian 5-point iterative stencil kernel (j2d5pt).
GPGPU@PPoPP
Lingqi Zhang, Mohamed Wahib, Peng Chen, Jintao Meng, Xiao Wang, Toshio Endo, Satoshi Matsuoka
2023 J jnl
Exploiting Scratchpad Memory for Deep Temporal Blocking: A case study for 2D Jacobian 5-point iterative stencil kernel (j2d5pt).
CoRR
Lingqi Zhang, Mohamed Wahib, Peng Chen, Jintao Meng, Xiao Wang, Toshio Endo, Satoshi Matsuoka
2023 A conf
PERKS: a Locality-Optimized Execution Model for Iterative Memory-bound GPU Applications.
ICS
Lingqi Zhang, Mohamed Wahib, Peng Chen, Jintao Meng, Xiao Wang, Toshio Endo, Satoshi Matsuoka
2023 A conf
Revisiting Temporal Blocking Stencil Optimizations.
ICS
Lingqi Zhang, Mohamed Wahib, Peng Chen, Jintao Meng, Xiao Wang, Toshio Endo, Satoshi Matsuoka
2023 J jnl
Revisiting Temporal Blocking Stencil Optimizations.
CoRR
Lingqi Zhang, Mohamed Wahib, Peng Chen, Jintao Meng, Xiao Wang, Toshio Endo, Satoshi Matsuoka
2023 J jnl
SWsnn: A Novel Simulator for Spiking Neural Networks.
J. Comput. Biol.
Zhichao Wang, Xuelei Li, Jianping Fan, Jintao Meng, Zhenli Lin, Yi Pan, Yanjie Wei
2023 J jnl
Simeuro: A Hybrid CPU-GPU Parallel Simulator for Neuromorphic Computing Chips.
IEEE Trans. Parallel Distributed Syst.
Huaipeng Zhang, Nhut-Minh Ho, Dogukan Yigit Polat, Peng Chen, Mohamed Wahib, Truong Thao Nguyen, Jintao Meng, Rick Siow Mong Goh, Satoshi Matsuoka, Tao Luo, Weng-Fai Wong
2022 J jnl
Automatic Generation of High-Performance Convolution Kernels on ARM CPUs for Deep Learning.
IEEE Trans. Parallel Distributed Syst.
Jintao Meng, Chen Zhuang, Peng Chen, Mohamed Wahib, Bertil Schmidt, Xiao Wang, Haidong Lan, Dou Wu, Minwen Deng, Yanjie Wei, Shengzhong Feng
2022 B conf
Efficient Phase-Functioned Real-time Character Control in Mobile Games: A TVM Enabled Approach.
ICPP
Haidong Lan, Wenxi Zhu, Du Wu, Qian Qiu, Honglin Zhu, Jingjing Zhao, Xinghui Fu, Liu Wei, Jintao Meng, Minwen Deng
2022 J jnl
Improving protein-ligand docking and screening accuracies by incorporating a scoring function correction term.
Briefings Bioinform.
Liangzhen Zheng, Jintao Meng, Kai Jiang, Haidong Lan, Zechen Wang, Mingzhi Lin, Weifeng Li, Hongwei Guo, Yanjie Wei, Yuguang Mu
2022 J jnl
Persistent Kernels for Iterative Memory-bound GPU Applications.
CoRR
Lingqi Zhang, Mohamed Wahib, Peng Chen, Jintao Meng, Xiao Wang, Satoshi Matsuoka
2022 — conf
Simulating Spiking Neural Networks Based on SW26010pro.
ISBRA
Zhichao Wang, Xuelei Li, Jintao Meng, Yi Pan, Yanjie Wei
2022 J jnl
nGIA: A novel Greedy Incremental Alignment based algorithm for gene sequence clustering.
Future Gener. Comput. Syst.
Zhen Ju, Huiling Zhang, Jintao Meng, Jingjing Zhang, Jianping Fan, Yi Pan, Weiguo Liu, Xuelei Li, Yanjie Wei
2020 J jnl
FeatherCNN: Fast Inference Computation with TensorGEMM on ARM Architectures.
IEEE Trans. Parallel Distributed Syst.
Haidong Lan, Jintao Meng, Christian Hundt, Bertil Schmidt, Minwen Deng, Xiaoning Wang, Weiguo Liu, Yu Qiao, Shengzhong Feng
2018 — conf
K-mer Counting for Genomic Big Data.
BigData Congress
Jianqiu Ge, Ning Guo, Jintao Meng, Bingqiang Wang, Pavan Balaji, Shengzhong Feng, Jiaxiu Zhou, Yanjie Wei
2017 B conf
Scalable Assembly for Massive Genomic Graphs.
CCGrid
Jintao Meng, Ning Guo, Jianqiu Ge, Yanjie Wei, Pavan Balaji, Bingqiang Wang
2016 B conf
SWAP-Assembler 2: Optimization of De Novo Genome Assembler at Extreme Scale.
ICPP
Jintao Meng, Sangmin Seo, Pavan Balaji, Yanjie Wei, Bingqiang Wang, Shengzhong Feng
2015 B conf
SWAP-Assembler 2: Scalable Genome Assembler towards Millions of Cores - Practice and Experience.
CCGRID
Jintao Meng, Yanjie Wei, Sangmin Seo, Pavan Balaji
2014 J jnl
SWAP-Assembler: scalable and efficient genome assembly towards thousands of cores.
BMC Bioinform.
Jintao Meng, Bingqiang Wang, Yanjie Wei, Shengzhong Feng, Pavan Balaji
2013 J jnl
An Energy Efficient Clustering Scheme for Data Aggregation in Wireless Sensor Networks.
J. Comput. Sci. Technol.
Jintao Meng, Jian-Rui Yuan, Shengzhong Feng, Yanjie Wei
2013 C conf
Improved Parallel Processing of Massive De Bruijn Graph for Genome Assembly.
APWeb
Li Zeng, Jiefeng Cheng, Jintao Meng, Bingqiang Wang, Shengzhong Feng
2012 C conf
DGraph: Algorithms for Shortgun Reads Assembly Using De Bruijn Graph.
NPC
Jintao Meng, Jianrui Yuan, Jiefeng Cheng, Yanjie Wei, Shengzhong Feng
2012 C conf
Small World Asynchronous Parallel Model for Genome Assembly.
NPC
Jintao Meng, Jianrui Yuan, Jiefeng Cheng, Yanjie Wei, Shengzhong Feng