Jingshan Huang

62 papers A 1C 2Journal 13Unranked 45

Year	Rank	Type	Title / Venue / Authors
2025	—	`conf`	Active Learning for Meibomian Gland Segmentation in Infrared Meibography Images. BIBM Kunfeng Lai, Dongqi Li, Ryan Benton, Glen M. Borchert, Li Li, Jiawen Lin, Jingshan Huang
2025	—	`conf`	Regional Adipose Tissues Differentially Regulate Autophagy in Pancreatic β-Cells via the IL-8/CXCR2 Axis. BIBM Tianhang Ma, Yi Zheng, Yaxin Guan, Juan Zhao, Fan Zuo, Xin Nian, Wenjiao Wang, Lijuan Zhang, Kunhou Zhou, Dongqi Li, Glen M. Borchert, Jingshan Huang, Bin Wu
2025	—	`conf`	Structure-Aware Unsupervised Enhancement of Low-Light Fundus Images. BIBM Jiaqi Zheng, Dongqi Li, Glen M. Borchert, Jiawen Lin, Jingshan Huang
2024	—	`conf`	Artificial intelligence assisted recognition and diagnosis of Magnetically controlled capsule gastroscopy. BIBM Susu Chen, Chuyu Wei, Dongqi Li, Glen M. Borchert, Zhong Yu, Jiawen Lin, Jingshan Huang
2024	—	`conf`	Differential Expression of Adipocyte Transcripts in SAT and VAT between Normal Weight and Obese/Overweight Individuals. BIBM Chuanmin Bai, Rong Huang, Juan Zhao, Glen M. Borchert, Jingshan Huang, Bin Wu
2024	—	`conf`	Relationship of body adipose tissue distribution with vitamin D and bone metabolism indices in patients with type 2 diabetes mellitus. BIBM Juan Zhao, Yaxin Guan, Fan Zuo, Xin Nian, Dongqi Li, Glen M. Borchert, Jingshan Huang, Bin Wu
2023	C	`conf`	Evaluating the Use of Large Language Model to Identify Top Research Priorities in Hematology. HealthCom Huiqin Chen, Fangwan Huang, Xuanyun Liu, Yinli Tan, Dihua Zhang, Dongqi Li, Glen M. Borchert, Ming Tan, Jingshan Huang
2023	—	`conf`	Semi-supervised meibomian gland segmentation via mutual consistency constraints and uncertainty rectification. BIBM Jiawen Lin, Feng Lu, Li Li, Lingjie Lin, Dongqi Li, Glen M. Borchert, Jingshan Huang
2021	—	`conf`	A New Classification Algorithm and a New Oversampling Method of Mapping Common Data Elements to the BRIDG Model. BIBM Shengyu Li, Yulong Huang, Mohan Vamsi Kasukurthi, Jiajie Yang, Dongqi Li, Guanhuan Yang, Jingwei Lin, Shaobo Tan, David Bourrie, Bin Ma, Glen M. Borchert, Jingshan Huang
2021	—	`conf`	SURFR: A Real-Time Platform for Non-Coding RNA Fragmentation Analysis Using Wavelets. BIBM Mohan Vamsi Kasukurthi, Dominika Houserova, Yulong Huang, Shengyu Li, Dongqi Li, Jingwei Lin, Guanhuan Yang, Shaobo Tan, David Bourrie, Bin Ma, Glen M. Borchert, Jingshan Huang
2020	J	`jnl`	A partial encryption algorithm for medical images based on quick response code and reversible data hiding technology. BMC Medical Informatics Decis. Mak. Jian Li, Zelin Zhang, Shengyu Li, Ryan Benton, Yulong Huang, Mohan Vamsi Kasukurthi, Dongqi Li, Jingwei Lin, Glen M. Borchert, Shaobo Tan, Gang Li, Bin Ma, Meihong Yang, Jingshan Huang
2020	J	`jnl`	Development of a support vector machine learning and smart phone Internet of Things-based architecture for real-time sleep apnea diagnosis. BMC Medical Informatics Decis. Mak. Bin Ma, Zhaolong Wu, Shengyu Li, Ryan Benton, Dongqi Li, Yulong Huang, Mohan Vamsi Kasukurthi, Jingwei Lin, Glen M. Borchert, Shaobo Tan, Gang Li, Meihong Yang, Jingshan Huang
2019	—	`conf`	A SVM-Based Algorithm to Diagnose Sleep Apnea. BIBM Bin Ma, Shaobo Tan, Meihong Yang, Jingshan Huang, Zhaolong Wu, Shengyu Li, Ryan Benton, Dongqi Li, Yulong Huang, Mohan Vamsi Kasukurthi, Jingwei Lin, Glen M. Borchert
2019	—	`conf`	An Open Source Map Optimization Platform for Efficient Navigation. CSE/EUC Liangming Cai, Rituparna Datta, Yurong Li, Jingshan Huang, Chunqiang Chen, Xiaoling Wang, Shurui Lin, Kai Cheng, Jiefeng Huang, Jinping Jiang, Minchen Zhu, Min Du
2019	J	`jnl`	ECG Arrhythmia Classification Using STFT-Based Spectrogram and Convolutional Neural Network. IEEE Access Jingshan Huang, Binqiang Chen, Bin Yao, Wangpeng He
2019	J	`jnl`	Exploring Observability of Attractor Cycles in Boolean Networks for Biomarker Detection. IEEE Access Yushan Qiu, Yulong Huang, Shaobo Tan, Dongqi Li, Ada Chaeli van der Zijp-Tan, Glen M. Borchert, Hao Jiang, Jingshan Huang
2019	—	`conf`	FGF21 mediates corticosteroid-related bone mass loss through PPAR-$\gamma$. BIBM Yaxin Guan, Jingwei Lin, Glen M. Borchert, Bin Wu, Jingshan Huang, Shengting Huang, Mohan Vamsi Kasukurthi, Yulong Huang, Dongqi Li, Shaobo Tan, Sida Wang, Xin Nian
2019	J	`jnl`	Muscle fatigue detection and treatment system driven by internet of things. BMC Medical Informatics Decis. Mak. Bin Ma, Chunxiao Li, Zhaolong Wu, Yulong Huang, Ada Chaeli van der Zijp-Tan, Shaobo Tan, Dongqi Li, Ada Fong, Chandan Basetty, Glen M. Borchert, Ryan Benton, Bin Wu, Jingshan Huang
2019	—	`conf`	Reversible Data Hiding Based Key Region Protection Method in Medical Images. BIBM Jian Li, Shaobo Tan, Bin Ma, Meihong Yang, Jingshan Huang, Zelin Zhang, Shengyu Li, Ryan Benton, Yulong Huang, Mohan Vamsi Kasukurthi, Dongqi Li, Jingwei Lin, Glen M. Borchert
2019	—	`conf`	SURFr: Algorithm for identification and analysis of ncRNA-derived RNAs. BIBM Mohan Vamsi Kasukurthi, Shengyu Li, Glen M. Borchert, Jingshan Huang, Dihua Zhang, Mika Housevera, Yulong Huang, Shaobo Tan, Bin Ma, Dongqi Li, Ryan Benton, Jingwei Lin
2019	—	`conf`	Sleep Disorder Classification Method based on Logistic Regression with Apnea-ECG Dataset. AIAM (ACM) Liangming Cai, Chunqiang Chen, Xiaoling Wang, Xiong Yang, Shurui Lin, Jiefeng Huang, Jinping Jiang, Rituparna Datta, Min Du, Haiyan Jiang, Minchen Zhu, Jingshan Huang
2019	—	`conf`	Sleep Disorder Data Stream Classification Based on Classifiers Ensemble and Active Learning. BIBM Liangming Cai, Rituparna Datta, Jingshan Huang, Shuai Dong, Min Du
2019	—	`conf`	Use CPET data to predict the intervention effect of aerobic exercise on young hypertensive patients. BIBM Guanyi Yang, Ryan Benton, Glen M. Borchert, Bin Ma, Jingshan Huang, Xiuyu Leng, Fangwan Huang, Mohan Vamsi Kasukurthi, Yulong Huang, Dongqi Li, Jingwei Lin, Shaobo Tan, Guiying Lu
2019	J	`jnl`	Using an artificial neural network to map cancer common data elements to the biomedical research integrated domain group model in a semi-automated manner. BMC Medical Informatics Decis. Mak. Robinette Renner, Shengyu Li, Yulong Huang, Ada Chaeli van der Zijp-Tan, Shaobo Tan, Dongqi Li, Mohan Vamsi Kasukurthi, Ryan Benton, Glen M. Borchert, Jingshan Huang, Guoqian Jiang
2018	—	`conf`	A PWM-Based Muscle Fatigue Detection and Recovery System. BIBM Bin Ma, Chunxiao Li, Zhaolong Wu, Yulong Huang, Ada Chaeli van der Zijp-Tan, Shaobo Tan, Dongqi Li, Ada Fong, Chandan Basetty, Glen M. Borchert, Jingshan Huang
2018	J	`jnl`	A semantics-oriented computational approach to investigate microRNA regulation on glucocorticoid resistance in pediatric acute lymphoblastic leukemia. BMC Medical Informatics Decis. Mak. Huiqin Chen, Dihua Zhang, Guoping Zhang, Xiaofeng Li, Ying Liang, Mohan Vamsi Kasukurthi, Shengyu Li, Glen M. Borchert, Jingshan Huang
2018	—	`conf`	Body Composition and Biochemical Characteristics of Normal Weight Obesity in Japanese Young Women with Different Physical Activities. BIBM Jingshan Huang, Keisuke Fukuo, Gen Yoshino, Tsutomu Kazumi, Chandan Basetty, Yulong Huang, Shaobo Tan, Dongqi Li, Ada Chaeli van der Zijp-Tan, Ada Fong, Glen M. Borchert, Bin Wu
2018	J	`jnl`	Guest Editorial for Special Section on BIBM 2015. IEEE ACM Trans. Comput. Biol. Bioinform. Tianhai Tian, Jingshan Huang
2018	J	`jnl`	Introduction: selected extended articles from the 2nd International Workshop on Semantics-Powered Data Analytics (SEPDA 2017). BMC Medical Informatics Decis. Mak. Zhe He, Cui Tao, Jiang Bian, Rui Zhang, Jingshan Huang
2018	—	`conf`	Mapping Common Data Elements to a Domain Model Using an Artificial Neural Network. BIBM Robinette Renner, Shengyu Li, Yulong Huang, Shaobo Tan, Dongqi Li, Ada Chaeli van der Zijp-Tan, Ryan Benton, Glen M. Borchert, Jingshan Huang, Guoqian Jiang
2018	—	`conf`	Novel Method for Singleton and Cyclic Attractor Observability in Boolean Networks. BIBM Yushan Qiu, Yulong Huang, Shaobo Tan, Dongqi Li, Ada Chaeli van der Zijp-Tan, Ada Fong, Glen M. Borchert, Jingshan Huang
2017	—	`conf`	Combine biological experiments, statistical analysis, and semantic search to discover association among high-sensitive C-reactive protein, body fat mass distribution, and other cardiometabolic risk factors in young healthy women. BIBM Bin Wu, Jingshan Huang, Mohan Vamsi Kasukurthi, Fangwan Huang, Jiang Bian, Keisuke Fukuo, Kazuhisa Suzuki, Gen Yoshino, Tsutomu Kazumi
2017	—	`conf`	Computational analysis to discover microRNA biomarkers in glioblastoma. BIBM Huawei Jin, Zhenhua Yu, Xiaodan Wang, Weian Chen, Shaolei Guo, Mohan Vamsi Kasukurthi, Glen M. Borchert, Jingshan Huang
2017	—	`conf`	Discovering Inconsistencies in PubMed Abstracts through Ontology-Based Information Extraction. BCB Nisansa de Silva, Dejing Dou, Jingshan Huang
2017	—	`conf`	MeSH term-based semantic analysis of microRNA regulation on glucocorticoid resistance in pediatric acute lymphoblastic leukemia. BIBM Huiqin Chen, Dihua Zhang, Guoping Zhang, Xiaofeng Li, Ying Liang, Mohan Vamsi Kasukurthi, Glen M. Borchert, Jingshan Huang
2017	—	`conf`	Semantics-oriented data science and computational life sciences: Innovative application of semantic technologies in microRNA and lncRNA research. ICCABS Jingshan Huang, Dejing Dou, Ming Tan, Glen M. Borchert, Karen Eilbeck, Alan Ruttenberg, Ping Yang
2016	—	`conf`	A comprehensive (biological and computational) investigation on the role of microRNA: : mRNA regulations performed in chronic obstructive pulmonary disease and lung cancer. BIBM Jingshan Huang, Dejing Dou, Jun She, Andrew H. Limper, Yanan Yang, Ping Yang
2016	—	`conf`	Innovative microRNA-lncRNA-mRNA co-expression analysis to understand the pathogenesis and progression of diabetic kidney disease. BIBM Lihua Zhang, Rong Li, Qiuping Yang, Yanan Wu, Jingshan Huang, Bin Wu
2016	J	`jnl`	OmniSearch: a semantic search system based on the Ontology for MIcroRNA Target (OMIT) for microRNA-target gene interaction data. J. Biomed. Semant. Jingshan Huang, Fernando Gutierrez, Harrison J. Strachan, Dejing Dou, Weili Huang, Barry Smith, Judith A. Blake, Karen Eilbeck, Darren A. Natale, Yu Lin, Bin Wu, Nisansa de Silva, Xiaowei Wang, Zixing Liu, Glen M. Borchert, Ming Tan, Alan Ruttenberg
2016	J	`jnl`	The Non-Coding RNA Ontology (NCRO): a comprehensive resource for the unification of non-coding RNA biology. J. Biomed. Semant. Jingshan Huang, Karen Eilbeck, Barry Smith, Judith A. Blake, Dejing Dou, Weili Huang, Darren A. Natale, Alan Ruttenberg, Jun Huan, Michael T. Zimmermann, Guoqian Jiang, Yu Lin, Bin Wu, Harrison J. Strachan, Yongqun He, Shaojie Zhang, Xiaowei Wang, Zixing Liu, Glen M. Borchert, Ming Tan
2016	J	`jnl`	The development of non-coding RNA ontology. Int. J. Data Min. Bioinform. Jingshan Huang, Karen Eilbeck, Barry Smith, Judith A. Blake, Dejing Dou, Weili Huang, Darren A. Natale, Alan Ruttenberg, Jun Huan, Michael T. Zimmermann, Guoqian Jiang, Yu Lin, Bin Wu, Harrison J. Strachan, Nisansa de Silva, Mohan Vamsi Kasukurthi, Vikash Kumar Jha, Yongqun He, Shaojie Zhang, Xiaowei Wang, Zixing Liu, Glen M. Borchert, Ming Tan
2016	—	`conf`	The utilization of the OmniSearch semantic search tool to explore various microRNA regulation mechanisms in osteoarthritis. BIBM Jingshan Huang, Bi Liu, Yang Liu, Ji Chen
2015	—	`conf`	A domain ontology for the Non-Coding RNA field. BIBM Jingshan Huang, Karen Eilbeck, Judith A. Blake, Dejing Dou, Darren A. Natale, Alan Ruttenberg, Barry Smith, Michael T. Zimmermann, Guoqian Jiang, Yu Lin, Bin Wu, Yongqun He, Shaojie Zhang, Xiaowei Wang, He Zhang, Zixing Liu, Ming Tan
2015	—	`conf`	A semantic approach for knowledge capture of MIcroRNA-Target gene interactions. BIBM Jingshan Huang, Fernando Gutierrez, Dejing Dou, Judith A. Blake, Karen Eilbeck, Darren A. Natale, Barry Smith, Yu Lin, Xiaowei Wang, Zixing Liu, Ming Tan, Alan Ruttenberg
2013	—	`conf`	Intrinsically resilient energy control systems. CSIIRW Frederick T. Sheldon, Daniel Fetzer, David O. Manz, Jingshan Huang, Stuart Goose, Thomas H. Morris, Jiangbo Dang, Jonathan Kirsch, Dong Wei
2013	—	`conf`	Semantics-driven frequent data pattern mining on electronic health records for effective adverse drug event monitoring. BIBM Jingshan Huang, Jun Huan, Alexander Tropsha, Jiangbo Dang, He Zhang, Min Xiong
2013	—	`conf`	Semi-automated microRNA ontology development based on artificial neural networks. BIBM Jingshan Huang, Jiangbo Dang, Xingyu Lu, Min Xiong, William T. Gerthoffer, Ming Tan
2012	—	`conf`	An ontology-based MicroRNA knowledge sharing and acquisition framework. BIBM Workshops Jingshan Huang, Xingyu Lu, Dejing Dou, William T. Gerthoffer, Jiangbo Dang, Judith A. Blake, Ming Tan
2012	—	`conf`	Intrinsically Resilient Energy Control Systems. STIDS Frederick T. Sheldon, Jingshan Huang, Jiangbo Dang, Daniel Fetzer, Stuart Goose, Jonathan Kirsch, David O. Manz, Thomas H. Morris, Dong Wei
2010	—	`conf`	Knowledge Sharing and Reuse in Digital Forensics. SADFE Jingshan Huang, Alec Yasinsac, Patrick J. Hayes
2010	—	`conf`	NeuMORE: Ontology in stroke recovery. BIBM Workshops Christopher Townsend, Jingshan Huang, Dejing Dou, Haishan Liu, Lei He, Patrick J. Hayes, Robert Rudnick, Hardik Shah, Dennis Fell, Wei Liu
2010	—	`conf`	OMIT: Domain Ontology and Knowledge Acquisition in MicroRNA Target Prediction - (Short Paper). OTM Conferences (2) Christopher Townsend, Jingshan Huang, Dejing Dou, Shivraj Dalvi, Patrick J. Hayes, Lei He, Wen-Chang Lin, Haishan Liu, Robert Rudnick, Hardik Shah
2010	—	`conf`	Ontology for MicroRNA Target prediction in human cancer. BCB Jingshan Huang, Ming Tan, Dejing Dou, Lei He, Christopher Townsend, Patrick J. Hayes
2010	—	`conf`	Ontology-based knowledge acquisition for neuromotor functional recovery in stroke. BIBM Workshops Christopher Townsend, Jingshan Huang, Dejing Dou, Haishan Liu, Lei He, Patrick J. Hayes, Robert Rudnick, Hardik Shah, Dennis Fell, Wei Liu
2010	—	`conf`	Ontology-based knowledge discovery and sharing in bioinformatics and medical informatics: A brief survey. FSKD Jingshan Huang, Dejing Dou, Lei He, Patrick J. Hayes, Jiangbo Dang
2007	J	`jnl`	Ontology alignment as a basis for mobile service integration and invocation. Int. J. Pervasive Comput. Commun. Jingshan Huang, Jiangbo Dang, Michael N. Huhns, Yongzhen Shao
2007	—	`ed.`	Service-Oriented Computing: Agents, Semantics, and Engineering, AAMAS 2007 International Workshop, SOCASE 2007, Honolulu, HI, USA, May 14, 2007, Proceedings SOCASE Jingshan Huang, Ryszard Kowalczyk, Zakaria Maamar, David L. Martin, Ingo Müller, Suzette Stoutenburg, Katia P. Sycara
2007	A	`conf`	Workflow coordination for service-oriented multiagent systems. AAMAS Jiangbo Dang, Jingshan Huang, Michael N. Huhns
2006	—	`conf`	Ontology Reconciliation for Service-Oriented Computing. IEEE SCC Jingshan Huang, Jiangbo Dang, Michael N. Huhns
2005	—	`conf`	OmniSeer: A Cognitive Framework for User Modeling, Reuse of Prior and Tacit Knowledge, and Collaborative Knowledge Services. HICSS John Cheng, Ray Emami, Larry Kerschberg, Eugene Santos Jr., Qunhua Zhao, Hien Nguyen, Hua Wang, Michael N. Huhns, Marco Valtorta, Jiangbo Dang, Hrishikesh J. Goradia, Jingshan Huang, Sharon Xi
2005	—	`conf`	Reconciling Agent Ontologies for Web Service Applications. MATES Jingshan Huang, Rosa Laura Zavala Gutierrez, Benito Mendoza García, Michael N. Huhns
2005	C	`conf`	Sharing Ontology Schema Information for Web Service Integration. CIT Jingshan Huang, Rosa Laura Zavala Gutierrez, Benito Mendoza García, Michael N. Huhns