Jing Wu

13 papers Journal 13
YearRankTypeTitle / Venue / Authors
2026 J jnl
SMENET: A Multi-View Semantic Model for Multi-Level Enzyme Function Prediction.
IEEE Trans. Comput. Biol. Bioinform.
Hanwen Zhou, Wei Zhang, Zhaohong Deng, Guanjin Wang, Zhisheng Wei, Lei Wang, Xiaoyong Pan, Hong-Bin Shen, Dong-Jun Yu, Jing Wu
2025 J jnl
Advancing Enzyme Optimal pH Prediction via Retrieved Embedding Data Augmentation.
J. Chem. Inf. Model.
Ziqi Zhang, Zhisheng Wei, Zhengqiang Qin, Lei Wang, Jinsong Gong, Jinsong Shi, Jing Wu, Zhaohong Deng
2025 J jnl
DMMAFS: Protein Function Prediction Based on Multi-Modal Multi-Attention Fusion Features.
IEEE Trans. Comput. Biol. Bioinform.
Liangwen He, Zhaohong Deng, Fuping Hu, Zhongyu Wang, Yun Zuo, Lin Zhu, Haoran Chen, Xiaoyong Pan, Zhisheng Wei, Lei Wang, Hong-Bin Shen, Dong-Jun Yu, Jing Wu
2025 J jnl
EMOCPD: Efficient Attention-Based Models for Computational Protein Design Using Amino Acid Microenvironment.
J. Chem. Inf. Model.
Xiaoqi Ling, Cheng Cai, Demin Kong, Zhisheng Wei, Jing Wu, Lei Wang, Zhaohong Deng
2025 J jnl
Modeling Enzyme Temperature Stability from Sequence Segment Perspective.
J. Chem. Inf. Model.
Ziqi Zhang, Shiheng Chen, Runze Yang, Zhisheng Wei, Wei Zhang, Lei Wang, Zhanzhi Liu, Fengshan Zhang, Jing Wu, Xiaoyong Pan, Hongbin Shen, Longbing Cao, Zhaohong Deng
2025 J jnl
Modeling enzyme temperature stability from sequence segment perspective.
CoRR
Ziqi Zhang, Shiheng Chen, Runze Yang, Zhisheng Wei, Wei Zhang, Lei Wang, Zhanzhi Liu, Fengshan Zhang, Jing Wu, Xiaoyong Pan, Hongbin Shen, Longbing Cao, Zhaohong Deng
2025 J jnl
SEFP: Structure-Based Enzyme Function Prediction.
IEEE Trans. Comput. Biol. Bioinform.
Ziqi Zhang, Guanqing Yu, Zhaohong Deng, Chenxi Luo, Cheng Cai, Wei Zhang, Fuping Hu, Kup-Sze Choi, Zhisheng Wei, Lei Wang, Jing Wu
2024 J jnl
EMOCPD: Efficient Attention-based Models for Computational Protein Design Using Amino Acid Microenvironment.
CoRR
Xiaoqi Ling, Cheng Cai, Demin Kong, Zhisheng Wei, Jing Wu, Lei Wang, Zhaohong Deng
2023 J jnl
Conformational Switch of the 250s Loop Enables the Efficient Transglycosylation in GH Family 77.
J. Chem. Inf. Model.
Zhiyong Guo, Lei Wang, Deming Rao, Weiqiong Liu, Miaomiao Xue, Qisheng Fu, Mengwei Lu, Lingqia Su, Sheng Chen, Binju Wang, Jing Wu
2023 J jnl
MMSMAPlus: a multi-view multi-scale multi-attention embedding model for protein function prediction.
Briefings Bioinform.
Zhongyu Wang, Zhaohong Deng, Wei Zhang, Qiongdan Lou, Kup-Sze Choi, Zhisheng Wei, Lei Wang, Jing Wu
2022 J jnl
MDGF-MCEC: a multi-view dual attention embedding model with cooperative ensemble learning for CircRNA-disease association prediction.
Briefings Bioinform.
Qunzhuo Wu, Zhaohong Deng, Xiaoyong Pan, Hong-Bin Shen, Kup-Sze Choi, Shitong Wang, Jing Wu, Dong-Jun Yu
2022 J jnl
circRNA-binding protein site prediction based on multi-view deep learning, subspace learning and multi-view classifier.
Briefings Bioinform.
Hui Li, Zhaohong Deng, Haitao Yang, Xiaoyong Pan, Zhisheng Wei, Hong-Bin Shen, Kup-Sze Choi, Lei Wang, Shitong Wang, Jing Wu
2021 J jnl
RNA-binding protein recognition based on multi-view deep feature and multi-label learning.
Briefings Bioinform.
Haitao Yang, Zhaohong Deng, Xiaoyong Pan, Hong-Bin Shen, Kup-Sze Choi, Lei Wang, Shitong Wang, Jing Wu