Jie Sun

14 papers Journal 14
YearRankTypeTitle / Venue / Authors
2025 J jnl
Leveraging pharmacovigilance data to predict population-scale toxicity profiles of checkpoint inhibitor immunotherapy.
Nat. Comput. Sci.
Dongxue Yan, Siqi Bao, Zicheng Zhang, Jie Sun, Meng Zhou
2025 J jnl
Multi-Omics Deep-Learning Prediction of Homologous Recombination Deficiency-Like Phenotype Improved Risk Stratification and Guided Therapeutic Decisions in Gynecological Cancers.
IEEE J. Biomed. Health Informatics
Yibo Zhang, Congcong Yan, Zijian Yang, Meng Zhou, Jie Sun
2024 J jnl
Inference of Developmental Hierarchy and Functional States of Exhausted T Cells from Epigenetic Profiles with Deep Learning.
J. Chem. Inf. Model.
Hongyan Chen, Dongxue Yan, Jie Sun, Meng Zhou
2023 J jnl
Automatic detection and differential diagnosis of age-related macular degeneration from color fundus photographs using deep learning with hierarchical vision transformer.
Comput. Biol. Medicine
Ke Xu, Shenghai Huang, Zijian Yang, Yibo Zhang, Ye Fang, Gongwei Zheng, Bin Lin, Meng Zhou, Jie Sun
2023 J jnl
DeepDrRVO: A GAN-auxiliary two-step masked transformer framework benefits early recognition and differential diagnosis of retinal vascular occlusion from color fundus photographs.
Comput. Biol. Medicine
Zijian Yang, Yibo Zhang, Ke Xu, Jie Sun, Yue Wu, Meng Zhou
2022 J jnl
Comprehensive characterization genetic regulation and chromatin landscape of enhancer-associated long non-coding RNAs and their implication in human cancer.
Briefings Bioinform.
Xin Li, Xu Pan, Hanxiao Zhou, Peng Wang, Yue Gao, Shipeng Shang, Shuang Guo, Jie Sun, Zhiying Xiong, Shangwei Ning, Hui Zhi, Xia Li
2021 J jnl
Computational principles and practice for decoding immune contexture in the tumor microenvironment.
Briefings Bioinform.
Zicheng Zhang, Siqi Bao, Congcong Yan, Ping Hou, Meng Zhou, Jie Sun
2021 J jnl
Computational recognition of lncRNA signature of tumor-infiltrating B lymphocytes with potential implications in prognosis and immunotherapy of bladder cancer.
Briefings Bioinform.
Meng Zhou, Zicheng Zhang, Siqi Bao, Ping Hou, Congcong Yan, Jianzhong Su, Jie Sun
2021 J jnl
LincSNP 3.0: an updated database for linking functional variants to human long non-coding RNAs, circular RNAs and their regulatory elements.
Nucleic Acids Res.
Yue Gao, Xin Li, Shipeng Shang, Shuang Guo, Peng Wang, Dailin Sun, Jing Gan, Jie Sun, Yakun Zhang, Junwei Wang, Xinyue Wang, Xia Li, Yunpeng Zhang, Shangwei Ning
2021 J jnl
Mechanistically derived patient-level framework for precision medicine identifies a personalized immune prognostic signature in high-grade serous ovarian cancer.
Briefings Bioinform.
Hengqiang Zhao, Shanshan Gu, Siqi Bao, Congcong Yan, Zicheng Zhang, Ping Hou, Meng Zhou, Jie Sun
2019 J jnl
Analysis of long noncoding RNAs highlights region-specific altered expression patterns and diagnostic roles in Alzheimer's disease.
Briefings Bioinform.
Meng Zhou, Hengqiang Zhao, Xinyu Wang, Jie Sun, Jianzhong Su
2019 J jnl
MetSigDis: a manually curated resource for the metabolic signatures of diseases.
Briefings Bioinform.
Liang Cheng, Haixiu Yang, Hengqiang Zhao, Xiaoya Pei, Hongbo Shi, Jie Sun, Yunpeng Zhang, Zhenzhen Wang, Meng Zhou
2018 J jnl
DincRNA: a comprehensive web-based bioinformatics toolkit for exploring disease associations and ncRNA function.
Bioinform.
Liang Cheng, Yang Hu, Jie Sun, Meng Zhou, Qinghua Jiang
2011 J jnl
A novel network-based method for measuring the functional relationship between gene sets.
Bioinform.
Qianghu Wang, Jie Sun, Meng Zhou, Haixiu Yang, Yan Li, Xiang Li, Sali Lv, Xia Li, Yixue Li