Jie Pan

15 papers Journal 12Unranked 3
YearRankTypeTitle / Venue / Authors
2026 J jnl
CM-PHI: combining multi-hop attention graph neural network with sequence semantic analysis to predict phage-host interaction.
Expert Syst. Appl.
Jie Pan, Rui Wang, Weiping Ding, Yuechao Li, Zhuhong You, Qinghua Huang, Dawei Wei, Shiwei Wang, Yanmei Sun
2025 J jnl
Graph Structure Learning for Tumor Microenvironment with Cell Type Annotation from non-spatial scRNA-seq data.
CoRR
Yu-An Huang, Yue-Chao Li, Hai-Ru You, Jie Pan, Xiyue Cao, Xinyuan Li, Zhi-An Huang, Zhu-Hong You
2025 J jnl
Machine learning for modelling unstructured grid data in computational physics: A review.
Inf. Fusion
Sibo Cheng, Marc Bocquet, Weiping Ding, Tobias Sebastian Finn, Rui Fu, Jinlong Fu, Yike Guo, Eleda Johnson, Siyi Li, Che Liu, Eric Newton Moro, Jie Pan, Matthew D. Piggott, César Quilodrán Casas, Prakhar Sharma, Kun Wang, Dunhui Xiao, Xiao Xue, Yong Zeng, Mingrui Zhang, Hao Zhou, Kewei Zhu, Rossella Arcucci
2025 J jnl
Machine learning for modelling unstructured grid data in computational physics: a review.
CoRR
Sibo Cheng, Marc Bocquet, Weiping Ding, Tobias Sebastian Finn, Rui Fu, Jinlong Fu, Yike Guo, Eleda Johnson, Siyi Li, Che Liu, Eric Newton Moro, Jie Pan, Matthew D. Piggott, César Quilodrán Casas, Prakhar Sharma, Kun Wang, Dunhui Xiao, Xiao Xue, Yong Zeng, Mingrui Zhang, Hao Zhou, Kewei Zhu, Rossella Arcucci
2024 J jnl
A microbial knowledge graph-based deep learning model for predicting candidate microbes for target hosts.
Briefings Bioinform.
Jie Pan, Zhen Zhang, Ying Li, Jiaoyang Yu, Zhuhong You, Chenyu Li, Shixu Wang, Minghui Zhu, Fengzhi Ren, Xuexia Zhang, Yanmei Sun, Shiwei Wang
2024 J jnl
MHIPM: Accurate Prediction of Microbe-Host Interactions Using Multiview Features from a Heterogeneous Microbial Network.
J. Chem. Inf. Model.
Jie Pan, Guangming Zhang, Yong Yang, Wenli Yang, Ning Mao, Zhuhong You, Jie Feng, Shiwei Wang, Yanmei Sun
2023 J jnl
PTBGRP: predicting phage-bacteria interactions with graph representation learning on microbial heterogeneous information network.
Briefings Bioinform.
Jie Pan, Zhuhong You, Wencai You, Tian Zhao, Chenlu Feng, Xuexia Zhang, Fengzhi Ren, Sanxing Ma, Fan Wu, Shiwei Wang, Yanmei Sun
2022 J jnl
A biomedical knowledge graph-based method for drug-drug interactions prediction through combining local and global features with deep neural networks.
Briefings Bioinform.
Zhong-Hao Ren, Zhu-Hong You, Changqing Yu, Li-Ping Li, Yongjian Guan, Lu-Xiang Guo, Jie Pan
2022 J jnl
A novel circRNA-miRNA association prediction model based on structural deep neural network embedding.
Briefings Bioinform.
Lu-Xiang Guo, Zhu-Hong You, Lei Wang, Changqing Yu, Bo-Wei Zhao, Zhong-Hao Ren, Jie Pan
2021 J jnl
A Sparse Feature Extraction Method with Elastic Net for Drug-Target Interaction Identification.
Sci. Program.
Zheng-Yang Zhao, Wenzhun Huang, Jie Pan, Yu-An Huang, Shanwen Zhang, Changqing Yu
2021 — conf
Computational Prediction of Protein-Protein Interactions in Plants Using Only Sequence Information.
ICIC (1)
Jie Pan, Changqing Yu, Liping Li, Zhuhong You, Zhong-Hao Ren, Yao Chen, Yongjian Guan
2021 J jnl
FWHT-RF: A Novel Computational Approach to Predict Plant Protein-Protein Interactions via an Ensemble Learning Method.
Sci. Program.
Jie Pan, Li-Ping Li, Changqing Yu, Zhu-Hong You, Zhong-Hao Ren, Jing-Yu Tang
2020 — conf
Predicting Protein-Protein Interactions from Protein Sequence Information Using Dual-Tree Complex Wavelet Transform.
ICIC (2)
Jie Pan, Zhuhong You, Changqing Yu, Li-Ping Li, Xinke Zhan
2020 — conf
Predicting Protein-Protein Interactions from Protein Sequence Using Locality Preserving Projections and Rotation Forest.
ICIC (2)
Xinke Zhan, Zhuhong You, Changqing Yu, Jie Pan, Ruiyang Li
2020 J jnl
Prediction of Drug-Target Interactions by Ensemble Learning Method From Protein Sequence and Drug Fingerprint.
IEEE Access
Xinke Zhan, Zhu-Hong You, Jinfan Cai, Liping Li, Changqing Yu, Jie Pan, Jiangkun Kong