Jiarui Ding

17 papers C 2Journal 11Unranked 4
YearRankTypeTitle / Venue / Authors
2025 J jnl
TxPert: Leveraging Biochemical Relationships for Out-of-Distribution Transcriptomic Perturbation Prediction.
CoRR
Frederik Wenkel, Wilson Tu, Cassandra Masschelein, Hamed Shirzad, Cian Eastwood, Shawn Whitfield, Ihab Bendidi, Craig Russell, Liam Hodgson, Yassir El Mesbahi, Jiarui Ding, Marta M. Fay, Berton Earnshaw, Emmanuel Noutahi, Alisandra Kaye Denton
2023 J jnl
Latent Space Inference For Spatial Transcriptomics.
CoRR
Jiarui Ding, Sayem Nazmuz Zaman, P. Y. Chen, David Wang
2023 J jnl
Role of Structural and Conformational Diversity for Machine Learning Potentials.
CoRR
Nikhil Shenoy, Prudencio Tossou, Emmanuel Noutahi, Hadrien Mary, Dominique Beaini, Jiarui Ding
2016 J jnl
densityCut: an efficient and versatile topological approach for automatic clustering of biological data.
Bioinform.
Jiarui Ding, Sohrab P. Shah, Anne Condon
2013 J jnl
A robust hidden semi-Markov model with application to aCGH data processing.
Int. J. Data Min. Bioinform.
Jiarui Ding, Sohrab P. Shah
2013 — conf
Base station power model and application for energy efficient LTE.
ICCT
Kai Liu, Jinwei He, Jiarui Ding, Yuanchao Zhu, Zhimin Liu
2012 J jnl
Feature-based classifiers for somatic mutation detection in tumour-normal paired sequencing data.
Bioinform.
Jiarui Ding, Ali Bashashati, Andrew Roth, Arusha Oloumi, Kane Tse, Thomas Zeng, Gholamreza Haffari, Martin Hirst, Marco A. Marra, Anne Condon, Sam Aparicio, Sohrab P. Shah
2012 J jnl
JointSNVMix: a probabilistic model for accurate detection of somatic mutations in normal/tumour paired next-generation sequencing data.
Bioinform.
Andrew Roth, Jiarui Ding, Ryan D. Morin, Anamaria Crisan, Gavin Ha, Ryan Giuliany, Ali Bashashati, Martin Hirst, Gulisa Turashvili, Arusha Oloumi, Marco A. Marra, Sam Aparicio, Sohrab P. Shah
2011 J jnl
SVM-RFE based feature selection for tandem mass spectrum quality assessment.
Int. J. Data Min. Bioinform.
Jiarui Ding, Jin-Hong Shi, Fang-Xiang Wu
2010 — conf
An adaptive approach to denoising tandem mass spectra.
BIBM Workshops
Wenjun Chris Lin, Fang-Xiang Wu, Jinhon Shi, Jiarui Ding, Wenjun Zhang
2010 J jnl
Charge state determination of peptide tandem mass spectra using support vector machine (SVM).
IEEE Trans. Inf. Technol. Biomed.
An-Min Zou, Jin-Hong Shi, Jiarui Ding, Fang-Xiang Wu
2010 — conf
Robust hidden semi-Markov modeling of array CGH data.
BIBM
Jiarui Ding, Sohrab P. Shah
2009 J jnl
Quality assessment of tandem mass spectra using support vector machine (SVM).
BMC Bioinform.
An-Min Zou, Fang-Xiang Wu, Jiarui Ding, Guy G. Poirier
2008 J jnl
An approach to assessing peptide mass spectral quality without prior information.
Int. J. Funct. Informatics Pers. Medicine
Fang-Xiang Wu, Jiarui Ding, Guy G. Poirier
2008 C conf
Charge state determination of peptide tandem mass spectra using support vector machine (SVM).
BIBE
An-Min Zou, Jiarui Ding, Jin-Hong Shi, Fang-Xiang Wu
2008 — conf
Feature Selection for Tandem Mass Spectrum Quality Assessment.
BIBM
Jiarui Ding, Jin-Hong Shi, An-Min Zou, Fang-Xiang Wu
2007 C conf
A Framework for Mass Spectral Quality Assessment without Prior Information.
BIBE
Fang-Xiang Wu, Jiarui Ding, Guy G. Poirier