Jianhan Chen - RankMe

19 papers Misc 2Journal 17

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Overcoming extrapolation challenges of deep learning by incorporating physics in protein sequence-function modeling. PLoS Comput. Biol. Shrishti Barethiya, Jian Huang, Clarice Stumpf, Xiao Liu, Hui Guan, Jianhan Chen
2024	J	`jnl`	Small Molecule NS11021 Promotes BK Channel Activation by Increasing Inner Pore Hydration. J. Chem. Inf. Model. Erik B. Nordquist, Zhiguang Jia, Jianhan Chen
2023	J	`jnl`	Incorporating physics to overcome data scarcity in predictive modeling of protein function: A case study of BK channels. PLoS Comput. Biol. Erik B. Nordquist, Guohui Zhang, Shrishti Barethiya, Nathan Ji, Kelli M. White, Lu Han, Zhiguang Jia, Jingyi Shi, Jianmin Cui, Jianhan Chen
2022	J	`jnl`	Toward Accurate Coarse-Grained Simulations of Disordered Proteins and Their Dynamic Interactions. J. Chem. Inf. Model. Yumeng Zhang, Xiaorong Liu, Jianhan Chen
2021	J	`jnl`	Accelerating atomistic simulations of proteins using multiscale enhanced sampling with independent tempering. J. Comput. Chem. Xiaorong Liu, Xiping Gong, Jianhan Chen
2021	J	`jnl`	Physics-based modeling provides predictive understanding of selectively promiscuous substrate binding by Hsp70 chaperones. PLoS Comput. Biol. Erik B. Nordquist, Charles A. English, Eugenia M. Clerico, Woody Sherman, Lila M. Gierasch, Jianhan Chen
2020	J	`jnl`	Accelerating the Generalized Born with Molecular Volume and Solvent Accessible Surface Area Implicit Solvent Model Using Graphics Processing Units. J. Comput. Chem. Xiping Gong, Mara Chiricotto, Xiaorong Liu, Erik B. Nordquist, Michael Feig, Charles L. Brooks III, Jianhan Chen
2020	Misc	`conf`	Modulation of p53 Transactivation Domain Conformations by Ligand Binding and Cancer-AssociatedMutations. PSB Xiaorong Liu, Jianhan Chen
2018	J	`jnl`	A New Fast-Response Current-Mode Buck Converter With Improved I IEEE Trans. Very Large Scale Integr. Syst. Jiann-Jong Chen, Yuh-Shyan Hwang, Jianhan Chen, Yi-Tsen Ku, Cheng-Chieh Yu
2017	J	`jnl`	Efficacy of independence sampling in replica exchange simulations of ordered and disordered proteins. J. Comput. Chem. Kuo-Hao Lee, Jianhan Chen
2017	J	`jnl`	Optimization of the GBMV2 implicit solvent force field for accurate simulation of protein conformational equilibria. J. Comput. Chem. Kuo-Hao Lee, Jianhan Chen
2016	J	`jnl`	Multiscale enhanced sampling of intrinsically disordered protein conformations. J. Comput. Chem. Kuo-Hao Lee, Jianhan Chen
2016	J	`jnl`	Necessity of high-resolution for coarse-grained modeling of flexible proteins. J. Comput. Chem. Zhiguang Jia, Jianhan Chen
2015	J	`jnl`	Modulation of the Disordered Conformational Ensembles of the p53 Transactivation Domain by Cancer-Associated Mutations. PLoS Comput. Biol. Debabani Ganguly, Jianhan Chen
2014	J	`jnl`	Replica exchange with guided annealing for accelerated sampling of disordered protein conformations. J. Comput. Chem. Weihong Zhang, Jianhan Chen
2013	J	`jnl`	Electrostatically Accelerated Encounter and Folding for Facile Recognition of Intrinsically Disordered Proteins. PLoS Comput. Biol. Debabani Ganguly, Weihong Zhang, Jianhan Chen
2012	J	`jnl`	Residual Structures, Conformational Fluctuations, and Electrostatic Interactions in the Synergistic Folding of Two Intrinsically Disordered Proteins. PLoS Comput. Biol. Weihong Zhang, Debabani Ganguly, Jianhan Chen
2012	Misc	`conf`	Session introduction. Pacific Symposium on Biocomputing Jianhan Chen, Jianlin Cheng, A. Keith Dunker
2005	J	`jnl`	Application of torsion angle molecular dynamics for efficient sampling of protein conformations. J. Comput. Chem. Jianhan Chen, Wonpil Im, Charles L. Brooks III