Jian Li

15 papers Journal 14Unranked 1
YearRankTypeTitle / Venue / Authors
2024 J jnl
PmxPred: A data-driven approach for the identification of active polymyxin analogues against gram-negative bacteria.
Comput. Biol. Medicine
Xiaoyu Wang, Nitin Patil, Fuyi Li, Zhikang Wang, Haolan Zhan, Daniel Schmidt, Philip Thompson, Yuming Guo, Cornelia B. Landersdorfer, Hsin-Hui Shen, Anton Y. Peleg, Jian Li, Jiangning Song
2023 J jnl
Multi-modality data-driven analysis of diagnosis and treatment of psoriatic arthritis.
npj Digit. Medicine
Jing Xu, Jiarui Ou, Chen Li, Zheng Zhu, Jian Li, Hailun Zhang, Junchen Chen, Bin Yi, Wu Zhu, Weiru Zhang, Guanxiong Zhang, Qian Gao, Yehong Kuang, Jiangning Song, Xiang Chen, Hong Liu
2023 J jnl
iAMPCN: a deep-learning approach for identifying antimicrobial peptides and their functional activities.
Briefings Bioinform.
Jing Xu, Fuyi Li, Chen Li, Xudong Guo, Cornelia B. Landersdorfer, Hsin-Hui Shen, Anton Y. Peleg, Jian Li, Seiya Imoto, Jianhua Yao, Tatsuya Akutsu, Jiangning Song
2022 J jnl
ASPIRER: a new computational approach for identifying non-classical secreted proteins based on deep learning.
Briefings Bioinform.
Xiaoyu Wang, Fuyi Li, Jing Xu, Jia Rong, Geoffrey I. Webb, Zongyuan Ge, Jian Li, Jiangning Song
2022 J jnl
Towards a hybrid user interface for the visual exploration of large biomolecular networks using virtual reality.
J. Integr. Bioinform.
Michael Aichem, Karsten Klein, Tobias Czauderna, Dimitar Garkov, Jinxin Zhao, Jian Li, Falk Schreiber
2021 J jnl
A Deep Learning-Based Method for Identification of Bacteriophage-Host Interaction.
IEEE ACM Trans. Comput. Biol. Bioinform.
Menglu Li, Yanan Wang, Fuyi Li, Yun Zhao, Mengya Liu, Sijia Zhang, Yannan Bin, Alexander Ian Smith, Geoffrey I. Webb, Jian Li, Jiangning Song, Junfeng Xia
2021 J jnl
Comprehensive assessment of machine learning-based methods for predicting antimicrobial peptides.
Briefings Bioinform.
Jing Xu, Fuyi Li, André Leier, Dongxu Xiang, Hsin-Hui Shen, Tatiana T. Marquez-Lago, Jian Li, Dong-Jun Yu, Jiangning Song
2021 J jnl
DeepBL: a deep learning-based approach for
Briefings Bioinform.
Yanan Wang, Fuyi Li, Manasa Bharathwaj, Natalia C. Rosas, André Leier, Tatsuya Akutsu, Geoffrey I. Webb, Tatiana T. Marquez-Lago, Jian Li, Trevor Lithgow, Jiangning Song
2021 J jnl
Visual exploration of large metabolic models.
Bioinform.
Michael Aichem, Tobias Czauderna, Yan Zhu, Jinxin Zhao, Matthias Klapperstück, Karsten Klein, Jian Li, Falk Schreiber
2020 J jnl
A comprehensive review and performance evaluation of bioinformatics tools for HLA class I peptide-binding prediction.
Briefings Bioinform.
Shutao Mei, Fuyi Li, André Leier, Tatiana T. Marquez-Lago, Kailin Giam, Nathan P. Croft, Tatsuya Akutsu, Alexander Ian Smith, Jian Li, Jamie Rossjohn, Anthony W. Purcell, Jiangning Song
2020 J jnl
PRISMOID: a comprehensive 3D structure database for post-translational modifications and mutations with functional impact.
Briefings Bioinform.
Fuyi Li, Cunshuo Fan, Tatiana T. Marquez-Lago, André Leier, Jerico Nico De Leon Revote, Cangzhi Jia, Yan Zhu, Alexander Ian Smith, Geoffrey I. Webb, Quanzhong Liu, Leyi Wei, Jian Li, Jiangning Song
2020 J jnl
Procleave: Predicting Protease-specific Substrate Cleavage Sites by Combining Sequence and Structural Information.
Genom. Proteom. Bioinform.
Fuyi Li, André Leier, Quanzhong Liu, Yanan Wang, Dongxu Xiang, Tatsuya Akutsu, Geoffrey I. Webb, Alexander Ian Smith, Tatiana T. Marquez-Lago, Jian Li, Jiangning Song
2020 J jnl
iLearn : an integrated platform and meta-learner for feature engineering, machine-learning analysis and modeling of DNA, RNA and protein sequence data.
Briefings Bioinform.
Zhen Chen, Pei Zhao, Fuyi Li, Tatiana T. Marquez-Lago, André Leier, Jerico Nico De Leon Revote, Yan Zhu, David R. Powell, Tatsuya Akutsu, Geoffrey I. Webb, Kuo-Chen Chou, Alexander Ian Smith, Roger J. Daly, Jian Li, Jiangning Song
2017 — conf
3D-Stereoscopic Immersive Analytics Projects at Monash University and University of Konstanz.
SD&A
Björn Sommer, David G. Barnes, Sarah E. Boyd, Tom Chandler, Maxime Cordeil, Tobias Czauderna, Matthias Klapperstück, Karsten Klein, Toàn D. Nguyên, Hieu T. Nim, Kingsley Stephens, Dany Vohl, Stephen Jia Wang, Elliott Wilson, Yan Zhu, Jian Li, Jon McCormack, Kim Marriott, Falk Schreiber
2017 J jnl
Design and Evaluation of Novel Polymyxin Fluorescent Probes.
Sensors
Bo Yun, Kade D. Roberts, Philip E. Thompson, Roger L. Nation, Tony Velkov, Jian Li