Jiahua He

15 papers A 4Journal 8Unranked 2
YearRankTypeTitle / Venue / Authors
2025 J jnl
Deciphering Protein Secondary Structures and Nucleic Acids in Cryo-EM Maps Using Deep Learning.
J. Chem. Inf. Model.
Hong Cao, Jiahua He, Tao Li, Sheng-You Huang
2022 J jnl
TRScore: a 3D RepVGG-based scoring method for ranking protein docking models.
Bioinform.
Linyuan Guo, Jiahua He, Peicong Lin, Sheng-You Huang, Jianxin Wang
2021 J jnl
EMNUSS: a deep learning framework for secondary structure annotation in cryo-EM maps.
Briefings Bioinform.
Jiahua He, Sheng-You Huang
2021 J jnl
Full-length de novo protein structure determination from cryo-EM maps using deep learning.
Bioinform.
Jiahua He, Sheng-You Huang
2020 J jnl
Topology-independent and global protein structure alignment through an FFT-based algorithm.
Bioinform.
Zeyu Wen, Jiahua He, Sheng-You Huang
2019 J jnl
HNADOCK: a nucleic acid docking server for modeling RNA/DNA-RNA/DNA 3D complex structures.
Nucleic Acids Res.
Jiahua He, Jun Wang, Huanyu Tao, Yi Xiao, Sheng-You Huang
2019 J jnl
PepBDB: a comprehensive structural database of biological peptide-protein interactions.
Bioinform.
Zeyu Wen, Jiahua He, Huanyu Tao, Sheng-You Huang
2019 J jnl
Protein-ensemble-RNA docking by efficient consideration of protein flexibility through homology models.
Bioinform.
Jiahua He, Huanyu Tao, Sheng-You Huang
2011 A conf
Automatic Recognition of Performance Idioms in Scientific Applications.
IPDPS
Jiahua He, Allan Snavely, Rob F. Van der Wijngaart, Michael A. Frumkin
2011 — —
PMap : unlocking the performance genes of HPC applications.
Jiahua He
2010 — conf
DASH-IO: an empirical study of flash-based IO for HPC.
TG
Jiahua He, Jeffrey Bennett, Allan Snavely
2010 A conf
DASH: a Recipe for a Flash-based Data Intensive Supercomputer.
SC
Jiahua He, Arun Jagatheesan, Sandeep K. S. Gupta, Jeffrey Bennett, Allan Snavely
2010 A conf
Understanding the Impact of Emerging Non-Volatile Memories on High-Performance, IO-Intensive Computing.
SC
Adrian M. Caulfield, Joel Coburn, Todor I. Mollov, Arup De, Ameen Akel, Jiahua He, Arun Jagatheesan, Rajesh K. Gupta, Allan Snavely, Steven Swanson
2008 A conf
Code coverage, performance approximation and automatic recognition of idioms in scientific applications.
HPDC
Jiahua He, Allan Snavely, Rob F. Van der Wijngaart, Michael A. Frumkin
2006 — conf
Measuring the Performance and Reliability of Production Computational Grids.
GRID
Omid Khalili, Jiahua He, Catherine Olschanowsky, Allan Snavely, Henri Casanova