Jeremy K. Nicholson

11 papers Journal 11
YearRankTypeTitle / Venue / Authors
2021 J jnl
Strategy for improved characterization of human metabolic phenotypes using a COmbined Multi-block Principal components Analysis with Statistical Spectroscopy (COMPASS).
Bioinform.
Ruey Leng Loo, Queenie Chan, Henrik Antti, Jia V. Li, Hutan Ashrafian, Paul Elliott, Jeremiah Stamler, Jeremy K. Nicholson, Elaine Holmes, Julien Wist
2019 J jnl
Metabolomics in the Cloud: Scaling Computational Tools to Big Data.
CoRR
Jianliang Gao, Noureddin Sadawi, Ibrahim Karaman, Jake T. M. Pearce, Pablo A. Moreno, Anders Larsson, Marco Capuccini, Paul Elliott, Jeremy K. Nicholson, Timothy M. D. Ebbels, Robert C. Glen
2019 J jnl
SPUTNIK: an R package for filtering of spatially related peaks in mass spectrometry imaging data.
Bioinform.
Paolo Inglese, Gonçalo D. S. Correia, Zoltan Takats, Jeremy K. Nicholson, Robert C. Glen
2019 J jnl
The nPYc-Toolbox, a Python module for the pre-processing, quality-control and analysis of metabolic profiling datasets.
Bioinform.
Caroline J. Sands, Arnaud M. Wolfer, Gonçalo D. S. Correia, Noureddin Sadawi, Arfan Ahmed, Beatriz Jiménez, Matthew R. Lewis, Robert C. Glen, Jeremy K. Nicholson, Jake T. M. Pearce
2019 J jnl
pJRES Binning Algorithm (JBA): a new method to facilitate the recovery of metabolic information from pJRES 1H NMR spectra.
Bioinform.
Andrea Rodriguez-Martinez, Rafael Ayala, Joram M. Posma, Nikita Harvey, Beatriz Jiménez, Kazuhiro Sonomura, Taka-Aki Sato, Fumihiko Matsuda, Pierre A. Zalloua, Dominique Gauguier, Jeremy K. Nicholson, Marc-Emmanuel Dumas
2018 J jnl
MWASTools: an R/bioconductor package for metabolome-wide association studies.
Bioinform.
Andrea Rodriguez-Martinez, Joram M. Posma, Rafael Ayala, Ana Luísa Neves, Maryam Anwar, Enrico Petretto, Costanza Emanueli, Dominique Gauguier, Jeremy K. Nicholson, Marc-Emmanuel Dumas
2017 J jnl
MetaboSignal: a network-based approach for topological analysis of metabotype regulation via metabolic and signaling pathways.
Bioinform.
Andrea Rodriguez-Martinez, Rafael Ayala, Joram M. Posma, Ana Luísa Neves, Dominique Gauguier, Jeremy K. Nicholson, Marc-Emmanuel Dumas
2014 J jnl
MetaboNetworks, an interactive Matlab-based toolbox for creating, customizing and exploring sub-networks from KEGG.
Bioinform.
Joram M. Posma, Steven L. Robinette, Elaine Holmes, Jeremy K. Nicholson
2009 J jnl
Genetic algorithms for simultaneous variable and sample selection in metabonomics.
Bioinform.
Rachel Cavill, Hector C. Keun, Elaine Holmes, John C. Lindon, Jeremy K. Nicholson, Timothy M. D. Ebbels
2008 J jnl
K-OPLS package: Kernel-based orthogonal projections to latent structures for prediction and interpretation in feature space.
BMC Bioinform.
Max Bylesjö, Mattias Rantalainen, Jeremy K. Nicholson, Elaine Holmes, Johan Trygg
2008 J jnl
Piecewise multivariate modelling of sequential metabolic profiling data.
BMC Bioinform.
Mattias Rantalainen, Olivier Cloarec, Timothy M. D. Ebbels, Torbjörn Lundstedt, Jeremy K. Nicholson, Elaine Holmes, Johan Trygg