Jeffrey W. Godden

23 papers Journal 23
YearRankTypeTitle / Venue / Authors
2007 J jnl
Bayesian Interpretation of a Distance Function for Navigating High-Dimensional Descriptor Spaces.
J. Chem. Inf. Model.
Martin Vogt, Jeffrey W. Godden, Jürgen Bajorath
2006 J jnl
A Distance Function for Retrieval of Active Molecules from Complex Chemical Space Representations.
J. Chem. Inf. Model.
Jeffrey W. Godden, Jürgen Bajorath
2006 J jnl
Assessment of Molecular Similarity from the Analysis of Randomly Generated Structural Fragment Populations.
J. Chem. Inf. Model.
José Batista, Jeffrey W. Godden, Jürgen Bajorath
2005 J jnl
Anatomy of Fingerprint Search Calculations on Structurally Diverse Sets of Active Compounds.
J. Chem. Inf. Model.
Jeffrey W. Godden, Florence L. Stahura, Jürgen Bajorath
2004 J jnl
Molecular Similarity Analysis and Virtual Screening by Mapping of Consensus Positions in Binary-Transformed Chemical Descriptor Spaces with Variable Dimensionality.
J. Chem. Inf. Model.
Jeffrey W. Godden, John R. Furr, Ling Xue, Florence L. Stahura, Jürgen Bajorath
2004 J jnl
Similarity Search Profiles as a Diagnostic Tool for the Analysis of Virtual Screening Calculations.
J. Chem. Inf. Model.
Ling Xue, Jeffrey W. Godden, Florence L. Stahura, Jürgen Bajorath
2003 J jnl
Design and Evaluation of a Molecular Fingerprint Involving the Transformation of Property Descriptor Values into a Binary Classification Scheme.
J. Chem. Inf. Comput. Sci.
Ling Xue, Jeffrey W. Godden, Florence L. Stahura, Jürgen Bajorath
2003 J jnl
Profile Scaling Increases the Similarity Search Performance of Molecular Fingerprints Containing Numerical Descriptors and Structural Keys.
J. Chem. Inf. Comput. Sci.
Ling Xue, Jeffrey W. Godden, Florence L. Stahura, Jürgen Bajorath
2003 J jnl
Recursive Median Partitioning for Virtual Screening of Large Databases.
J. Chem. Inf. Comput. Sci.
Jeffrey W. Godden, John R. Furr, Jürgen Bajorath
2002 J jnl
Chemical Descriptors with Distinct Levels of Information Content and Varying Sensitivity to Differences between Selected Compound Databases Identified by SE-DSE Analysis.
J. Chem. Inf. Comput. Sci.
Jeffrey W. Godden, Jürgen Bajorath
2002 J jnl
Classification of Biologically Active Compounds by Median Partitioning.
J. Chem. Inf. Comput. Sci.
Jeffrey W. Godden, Ling Xue, Jürgen Bajorath
2002 J jnl
Differential Shannon Entropy Analysis Identifies Molecular Property Descriptors that Predict Aqueous Solubility of Synthetic Compounds with High Accuracy in Binary QSAR Calculations.
J. Chem. Inf. Comput. Sci.
Florence L. Stahura, Jeffrey W. Godden, Jürgen Bajorath
2002 J jnl
Median Partitioning: A Novel Method for the Selection of Representative Subsets from Large Compound Pools.
J. Chem. Inf. Comput. Sci.
Jeffrey W. Godden, Ling Xue, Douglas B. Kitchen, Florence L. Stahura, E. James Schermerhorn, Jürgen Bajorath
2001 J jnl
Differential Shannon Entropy as a Sensitive Measure of Differences in Database Variability of Molecular Descriptors.
J. Chem. Inf. Comput. Sci.
Jeffrey W. Godden, Jürgen Bajorath
2001 J jnl
Fingerprint Scaling Increases the Probability of Identifying Molecules with Similar Activity in Virtual Screening Calculations.
J. Chem. Inf. Comput. Sci.
Ling Xue, Florence L. Stahura, Jeffrey W. Godden, Jürgen Bajorath
2001 J jnl
Mini-fingerprints Detect Similar Activity of Receptor Ligands Previously Recognized Only by Three-Dimensional Pharmacophore-Based Methods.
J. Chem. Inf. Comput. Sci.
Ling Xue, Florence L. Stahura, Jeffrey W. Godden, Jürgen Bajorath
2000 J jnl
Combinatorial Preferences Affect Molecular Similarity/Diversity Calculations Using Binary Fingerprints and Tanimoto Coefficients.
J. Chem. Inf. Comput. Sci.
Jeffrey W. Godden, Ling Xue, Jürgen Bajorath
2000 J jnl
Distinguishing between Natural Products and Synthetic Molecules by Descriptor Shannon Entropy Analysis and Binary QSAR Calculations.
J. Chem. Inf. Comput. Sci.
Florence L. Stahura, Jeffrey W. Godden, Ling Xue, Jürgen Bajorath
2000 J jnl
Evaluation of Descriptors and Mini-Fingerprints for the Identification of Molecules with Similar Activity.
J. Chem. Inf. Comput. Sci.
Ling Xue, Jeffrey W. Godden, Jürgen Bajorath
2000 J jnl
Variability of Molecular Descriptors in Compound Databases Revealed by Shannon Entropy Calculations.
J. Chem. Inf. Comput. Sci.
Jeffrey W. Godden, Florence L. Stahura, Jürgen Bajorath
1999 J jnl
Database Searching for Compounds with Similar Biological Activity Using Short Binary Bit String Representations of Molecules.
J. Chem. Inf. Comput. Sci.
Ling Xue, Jeffrey W. Godden, Jürgen Bajorath
1999 J jnl
Identification of a Preferred Set of Molecular Descriptors for Compound Classification Based on Principal Component Analysis.
J. Chem. Inf. Comput. Sci.
Ling Xue, Jeffrey W. Godden, Hua Gao, Jürgen Bajorath
1999 J jnl
Statistical analysis of computational docking of large compound data bases to distinct protein binding sites.
J. Comput. Chem.
Jeffrey W. Godden, Florence L. Stahura, Jürgen Bajorath