Jeffrey Shaman

28 papers Journal 28
YearRankTypeTitle / Venue / Authors
2025 J jnl
Estimation in Networks With Spatiotemporally Correlated Noise.
IEEE Trans. Autom. Control.
Sina Jahandari, Jeffrey Shaman
2024 J jnl
Challenges of COVID-19 Case Forecasting in the US, 2020-2021.
PLoS Comput. Biol.
Velma K. Lopez, Estee Y. Cramer, Robert Pagano, John M. Drake, Eamon B. O'Dea, Madeline Adee, Turgay Ayer, Jagpreet Chhatwal, Ozden O. Dalgic, Mary A. Ladd, Benjamin P. Linas, Peter P. Mueller, Jade Xiao, Johannes Bracher, Alvaro J. Castro Rivadeneira, Aaron Gerding, Tilmann Gneiting, Yuxin Huang, Dasuni Jayawardena, Abdul H. Kanji, Khoa Le, Anja Mühlemann, Jarad Niemi, Evan L. Ray, Ariane Stark, Yijin Wang, Nutcha Wattanachit, Martha W. Zorn, Sen Pei, Jeffrey Shaman, Teresa K. Yamana, Samuel R. Tarasewicz, Daniel J. Wilson, Sid Baccam, Heidi Gurung, Steve Stage, Brad Suchoski, Lei Gao, Zhiling Gu, Myungjin Kim, Xinyi Li, Guannan Wang, Lily Wang, Yueying Wang, Shan Yu, Lauren Gardner, Sonia Jindal, Maximilian Marshall, Kristen Nixon, Juan Dent, Alison L. Hill, Joshua Kaminsky, Elizabeth C. Lee, Joseph Chadi Lemaitre, Justin Lessler, Claire P. Smith, Shaun Truelove, Matt Kinsey, Luke C. Mullany, Kaitlin Rainwater-Lovett, Lauren Shin, Katharine Tallaksen, Shelby Wilson, Dean Karlen, Lauren A. Castro, Geoffrey Fairchild, Isaac Michaud, Dave Osthus, Jiang Bian, Wei Cao, Zhifeng Gao, Juan M. Lavista Ferres, Chaozhuo Li, Tie-Yan Liu, Xing Xie, Shun Zhang, Shun Zheng, Matteo Chinazzi, Jessica T. Davis, Kunpeng Mu, Ana L. Pastore y Piontti, Alessandro Vespignani, Xinyue Xiong, Robert Walraven, Jinghui Chen, Quanquan Gu, Lingxiao Wang, Pan Xu, Weitong Zhang, Difan Zou, Graham Casey Gibson, Daniel Sheldon, Ajitesh Srivastava, Aniruddha Adiga, Benjamin Hurt, Gursharn Kaur, Bryan Lewis, Madhav V. Marathe, Akhil Sai Peddireddy, Przemyslaw J. Porebski, Srinivasan Venkatramanan, Lijing Wang, Pragati V. Prasad, Jo W. Walker, Alexander E. Webber, Rachel B. Slayton, Matthew Biggerstaff, Nicholas G. Reich, Michael A. Johansson
2023 J jnl
Development of Accurate Long-lead COVID-19 Forecast.
PLoS Comput. Biol.
Wan Yang, Jeffrey Shaman
2023 J jnl
Hindcasts and forecasts of suicide mortality in US: A modeling study.
PLoS Comput. Biol.
Sasikiran Kandula, Mark Olfson, Madelyn S. Gould, Katherine M. Keyes, Jeffrey Shaman
2023 J jnl
Inference of transmission dynamics and retrospective forecast of invasive meningococcal disease.
PLoS Comput. Biol.
Jaime Cascante-Vega, Marta Galanti, Katharina Schley, Sen Pei, Jeffrey Shaman
2022 J jnl
Epidemic management and control through risk-dependent individual contact interventions.
PLoS Comput. Biol.
Tapio Schneider, Oliver R. A. Dunbar, Jinlong Wu, Lucas Böttcher, Dmitry Burov, Alfredo Garbuno-Inigo, Gregory LeClaire Wagner, Sen Pei, Chiara Daraio, Raffaele Ferrari, Jeffrey Shaman
2022 J jnl
Inference and dynamic simulation of malaria using a simple climate-driven entomological model of malaria transmission.
PLoS Comput. Biol.
Israel Ukawuba, Jeffrey Shaman
2021 J jnl
Epidemic Management and Control Through Risk-Dependent Individual Contact Interventions.
CoRR
Tapio Schneider, Oliver R. A. Dunbar, Jinlong Wu, Lucas Böttcher, Dmitry Burov, Alfredo Garbuno-Iñigo, Gregory LeClaire Wagner, Sen Pei, Chiara Daraio, Raffaele Ferrari, Jeffrey Shaman
2020 J jnl
Aggregating forecasts of multiple respiratory pathogens supports more accurate forecasting of influenza-like illness.
PLoS Comput. Biol.
Sen Pei, Jeffrey Shaman
2020 J jnl
Forecasting influenza in Europe using a metapopulation model incorporating cross-border commuting and air travel.
PLoS Comput. Biol.
Sarah C. Kramer, Sen Pei, Jeffrey Shaman
2020 J jnl
arcasHLA: high-resolution HLA typing from RNAseq.
Bioinform.
Rose Orenbuch, Ioan Filip, Devon Comito, Jeffrey Shaman, Itsik Pe'er, Raul Rabadan
2019 J jnl
Accuracy of real-time multi-model ensemble forecasts for seasonal influenza in the U.S.
PLoS Comput. Biol.
Nicholas G. Reich, Craig J. McGowan, Teresa K. Yamana, Abhinav Tushar, Evan L. Ray, Dave Osthus, Sasikiran Kandula, Logan C. Brooks, Willow Crawford-Crudell, Graham Casey Gibson, Evan Moore, Rebecca Silva, Matthew Biggerstaff, Michael A. Johansson, Roni Rosenfeld, Jeffrey Shaman
2019 J jnl
Characteristics of measles epidemics in China (1951-2004) and implications for elimination: A case study of three key locations.
PLoS Comput. Biol.
Wan Yang, Juan Li, Jeffrey Shaman
2019 J jnl
Correction: Geospatial characteristics of measles transmission in China during 2005-2014.
PLoS Comput. Biol.
Wan Yang, Liang Wen, Shen-Long Li, Kai Chen, Wen-Yi Zhang, Jeffrey Shaman
2019 J jnl
Development and validation of influenza forecasting for 64 temperate and tropical countries.
PLoS Comput. Biol.
Sarah C. Kramer, Jeffrey Shaman
2019 J jnl
Predictability in process-based ensemble forecast of influenza.
PLoS Comput. Biol.
Sen Pei, Mark A. Cane, Jeffrey Shaman
2019 J jnl
Reappraising the utility of Google Flu Trends.
PLoS Comput. Biol.
Sasikiran Kandula, Jeffrey Shaman
2018 J jnl
Use of temperature to improve West Nile virus forecasts.
PLoS Comput. Biol.
Nicholas B. DeFelice, Zachary D. Schneider, Eliza Little, Christopher Barker, Kevin A. Caillouët, Scott R. Campbell, Dan Damian, Patrick Irwin, Herff M. P. Jones, John Townsend, Jeffrey Shaman
2017 J jnl
Geospatial characteristics of measles transmission in China during 2005-2014.
PLoS Comput. Biol.
Wan Yang, Liang Wen, Shen-Long Li, Kai Chen, Wen-Yi Zhang, Jeffrey Shaman
2017 J jnl
Individual versus superensemble forecasts of seasonal influenza outbreaks in the United States.
PLoS Comput. Biol.
Teresa K. Yamana, Sasikiran Kandula, Jeffrey Shaman
2017 J jnl
The use of ambient humidity conditions to improve influenza forecast.
PLoS Comput. Biol.
Jeffrey Shaman, Sasikiran Kandula, Wan Yang, Alicia Karspeck
2016 J jnl
Collective influence maximization in threshold models of information cascading with first-order transitions.
CoRR
Sen Pei, Xian Teng, Jeffrey Shaman, Flaviano Morone, Hernán A. Makse
2016 J jnl
Forecasting Influenza Outbreaks in Boroughs and Neighborhoods of New York City.
PLoS Comput. Biol.
Wan Yang, Donald R. Olson, Jeffrey Shaman
2016 J jnl
Retrospective Parameter Estimation and Forecast of Respiratory Syncytial Virus in the United States.
PLoS Comput. Biol.
Julia Reis, Jeffrey Shaman
2015 J jnl
Forecasting Influenza Epidemics in Hong Kong.
PLoS Comput. Biol.
Wan Yang, Benjamin J. Cowling, Eric H. Y. Lau, Jeffrey Shaman
2015 J jnl
Impact of School Cycles and Environmental Forcing on the Timing of Pandemic Influenza Activity in Mexican States, May-December 2009.
PLoS Comput. Biol.
James Tamerius, Cécile Viboud, Jeffrey Shaman, Gerardo Chowell
2014 J jnl
Comparison of Filtering Methods for the Modeling and Retrospective Forecasting of Influenza Epidemics.
PLoS Comput. Biol.
Wan Yang, Alicia Karspeck, Jeffrey Shaman
2014 J jnl
Spatial Transmission of 2009 Pandemic Influenza in the US.
PLoS Comput. Biol.
Julia R. Gog, Sébastien Ballesteros, Cécile Viboud, Lone Simonsen, Ottar N. Bjørnstad, Jeffrey Shaman, Dennis L. Chao, Farid Khan, Bryan T. Grenfell