Jeffrey D. Parvin

13 papers Journal 6Unranked 7
YearRankTypeTitle / Venue / Authors
2015 — conf
MICA: MicroRNA integration for active module discovery.
BCB
Ayat Hatem, Kamer Kaya, Jeffrey D. Parvin, Kun Huang, Ümit V. Çatalyürek
2014 J jnl
MMAD: microarray microdissection with analysis of differences is a computational tool for deconvoluting cell type-specific contributions from tissue samples.
Bioinform.
David A. Liebner, Kun Huang, Jeffrey D. Parvin
2014 — conf
Mining massive SNP data for identifying associated SNPs and uncovering gene relationships.
BCB
Amy Webb, Aaron Albin, Zhan Ye, Majid Rastegar-Mojarad, Kun Huang, Jeffrey D. Parvin, Wolfgang Sadee, Lang Li, Simon M. Lin, Yang Xiang
2013 J jnl
Gene co-expression analysis predicts genetic aberration loci associated with colon cancer metastasis.
Int. J. Comput. Biol. Drug Des.
Jie Zhang, Shiwei Ni, Yang Xiang, Jeffrey D. Parvin, Yufeng Yang, Yongjian Zhou, Kun Huang
2012 J jnl
Weighted Frequent Gene Co-expression Network Mining to Identify Genes Involved in Genome Stability.
PLoS Comput. Biol.
Jie Zhang, Kewei Lu, Yang Xiang, Muhtadi Islam, Shweta Kotian, Zeina Kais, Cindy Lee, Mansi Arora, Hui-wen Liu, Jeffrey D. Parvin, Kun Huang
2011 J jnl
Comparing Multiple Chip-Sequencing Experiments.
J. Bioinform. Comput. Biol.
Hatice Gulcin Ozer, Yi-Wen Huang, Jiejun Wu, Jeffrey D. Parvin, Tim Hui-Ming Huang, Kun Huang
2011 — conf
Identifying smoking associated gene co-expression networks related to oral cancer initiation.
BIBM Workshops
Jie Zhang, Thomas Knobloch, Jeffrey D. Parvin, Christopher Weghorst, Kun Huang
2011 — conf
Predicting Parkinson's disease related genes using frequent gene co-expression analysis.
BIBM Workshops
Jie Zhang, Shiwei Ni, Jeffrey D. Parvin, Yufeng Yang, Kun Huang
2010 J jnl
Inference of hierarchical regulatory network of estrogen-dependent breast cancer through ChIP-based data.
BMC Syst. Biol.
Fei Gu, Hang-Kai Hsu, Pei-Yin Hsu, Jiejun Wu, Yilin Ma, Jeffrey D. Parvin, Tim Hui-Ming Huang, Victor X. Jin
2009 — conf
A Biclustering Method to Discover Co-regulated Genes Using Diverse Gene Expression Datasets.
BICoB
Doruk Bozdag, Jeffrey D. Parvin, Ümit V. Çatalyürek
2009 — conf
A Comprehensive Analysis Workflow for Genome-Wide Screening Data from ChIP-Sequencing Experiments.
BICoB
Hatice Gulcin Ozer, Doruk Bozdag, Terry Camerlengo, Jiejun Wu, Yi-Wen Huang, Timothy D. R. Hartley, Jeffrey D. Parvin, Tim Hui-Ming Huang, Ümit V. Çatalyürek, Kun Huang
2009 J jnl
Comparative study on ChIP-seq data: normalization and binding pattern characterization.
Bioinform.
Cenny Taslim, Jiejun Wu, Pearlly Yan, Greg Singer, Jeffrey D. Parvin, Tim Hui-Ming Huang, Shili Lin, Kun Huang
2009 — conf
Enabling Data Analysis on High-Throughput Data in Large Data Depository Using Web-Based Analysis Platform - A Case Study on Integrating QUEST with GenePattern in Epigenetics Research.
BIBM
Terry Camerlengo, Hatice Gulcin Ozer, Pearlly Yan, Jeffrey D. Parvin, Tim Hui-Ming Huang, Kun Huang, Mingxiang Teng, Lang Li, Yunlong Liu, Francisco Perez, Tahsin M. Kurç