Jean-Marc Schwartz

29 papers A 1Journal 20Unranked 7
YearRankTypeTitle / Venue / Authors
2024 J jnl
HIHISIV: a database of gene expression in HIV and SIV host immune response.
BMC Bioinform.
Raquel Lopes Costa, Luiz M. R. Gadelha Jr., Mirela D'arc, Marcelo Ribeiro-Alves, David L. Robertson, Jean-Marc Schwartz, Marcelo A. Soares, Fábio Porto
2022 J jnl
SubcellulaRVis: a web-based tool to simplify and visualise subcellular compartment enrichment.
Nucleic Acids Res.
Joanne Watson, Michael Smith, Chiara Francavilla, Jean-Marc Schwartz
2021 J jnl
Combinatorial mathematical modelling approaches to interrogate rear retraction dynamics in 3D cell migration.
PLoS Comput. Biol.
Joseph H. R. Hetmanski, Matthew C. Jones, Fatima Chunara, Jean-Marc Schwartz, Patrick T. Caswell
2019 — ch.
Metabolic Models.
Encyclopedia of Bioinformatics and Computational Biology (2)
Jean-Marc Schwartz, Zita Soons
2019 J jnl
Modelling the role of dual specificity phosphatases in herceptin resistant breast cancer cell lines.
Comput. Biol. Chem.
Petronela Buiga, Ari Elson, Lydia Tabernero, Jean-Marc Schwartz
2019 J jnl
SkeletalVis: an exploration and meta-analysis data portal of cross-species skeletal transcriptomics data.
Bioinform.
Jamie Soul, Tim E. Hardingham, Ray P. Boot-Handford, Jean-Marc Schwartz
2018 — conf
A meta-analysis portal for human breast cancer transcriptomics data: BreastCancerVis.
BIBM
Petronela Buiga, Jamie Soul, Jean-Marc Schwartz
2018 J jnl
Regulation of dual specificity phosphatases in breast cancer during initial treatment with Herceptin: a Boolean model analysis.
BMC Syst. Biol.
Petronela Buiga, Ari Elson, Lydia Tabernero, Jean-Marc Schwartz
2018 J jnl
Using set theory to reduce redundancy in pathway sets.
BMC Bioinform.
Ruth Alexandra Stoney, Jean-Marc Schwartz, David L. Robertson, Goran Nenadic
2017 J jnl
Cyclic decomposition explains a photosynthetic down regulation for Chlamydomonas reinhardtii.
Biosyst.
Stephen P. Chapman, Marcelo Trindade dos Santos, Giles N. Johnson, Maurício Vieira Kritz, Jean-Marc Schwartz
2017 J jnl
Insight into glucocorticoid receptor signalling through interactome model analysis.
PLoS Comput. Biol.
Emyr Bakker, Kun Tian, Luciano Mutti, Constantinos Demonacos, Jean-Marc Schwartz, Marija Krstic-Demonacos
2016 J jnl
A MAPK-Driven Feedback Loop Suppresses Rac Activity to Promote RhoA-Driven Cancer Cell Invasion.
PLoS Comput. Biol.
Joseph H. R. Hetmanski, Egor Zindy, Jean-Marc Schwartz, Patrick T. Caswell
2016 J jnl
PhenomeScape: a cytoscape app to identify differentially regulated sub-networks using known disease associations.
Bioinform.
Jamie Soul, Sara L. Dunn, Tim E. Hardingham, Ray P. Boot-Handford, Jean-Marc Schwartz
2015 J jnl
A logical model of HIV-1 interactions with the T-cell activation signalling pathway.
Bioinform.
Oyebode J. Oyeyemi, Oluwafemi Davies, David L. Robertson, Jean-Marc Schwartz
2014 — conf
Applications of p53 interactome analysis to personalised drug discovery.
IWBBIO
Michelle Hussain, Benjamin Stutchbury, Kun Tian, Rengül Çetin-Atalay, Jean-Marc Schwartz, Marija Krstic-Demonacos
2014 — conf
In silico prediction of elementary mode fluxes.
IWBBIO
Jean-Marc Schwartz, Peter Neal Taylor
2013 J jnl
PathNER: a tool for systematic identification of biological pathway mentions in the literature.
BMC Syst. Biol.
Chengkun Wu, Jean-Marc Schwartz, Goran Nenadic
2012 J jnl
Comprehensive Modelling of the
PLoS Comput. Biol.
Yu-Yao Tseng, Suzanne M. Hunt, Christian Heintzen, Susan K. Crosthwaite, Jean-Marc Schwartz
2012 J jnl
Exploring the genetic control of glycolytic oscillations in Saccharomyces Cerevisiae.
BMC Syst. Biol.
Thomas Williamson, Delali A. Adiamah, Jean-Marc Schwartz, Lubomira Stateva
2010 J jnl
Integration of metabolic databases for the reconstruction of genome-scale metabolic networks.
BMC Syst. Biol.
Karin Radrich, Yoshimasa Tsuruoka, Paul D. Dobson, Albert Gevorgyan, Neil Swainston, Gino Baart, Jean-Marc Schwartz
2010 J jnl
Streamlining the construction of large-scale dynamic models using generic kinetic equations.
Bioinform.
Delali A. Adiamah, Julia Handl, Jean-Marc Schwartz
2009 J jnl
Deterministic mathematical models of the cAMP pathway in Saccharomyces cerevisiae.
BMC Syst. Biol.
Thomas Williamson, Jean-Marc Schwartz, Douglas B. Kell, Lubomira Stateva
2006 — conf
Identification of metabolic units induced by environmental signals.
ISMB (Supplement of Bioinformatics)
Jose C. Nacher, Jean-Marc Schwartz, Minoru Kanehisa, Tatsuya Akutsu
2006 J jnl
Quantitative elementary mode analysis of metabolic pathways: the example of yeast glycolysis.
BMC Bioinform.
Jean-Marc Schwartz, Minoru Kanehisa
2005 — conf
A quadratic programming approach for decomposing steady-state metabolic flux distributions onto elementary modes.
ECCB/JBI
Jean-Marc Schwartz, Minoru Kanehisa
2005 J jnl
Modelling liver tissue properties using a non-linear visco-elastic model for surgery simulation.
Medical Image Anal.
Jean-Marc Schwartz, Marc Denninger, Denis Rancourt, Christian Moisan, Denis Laurendeau
2004 — conf
Virtual Environment and Sensori-Motor Activities: Haptic, Auditory and Olfactory Devices.
WSCG (Posters)
Marielle Mokhtari, François Bernier, François Lemieux, H. Martel, Jean-Marc Schwartz, Denis Laurendeau, Alexandra Branzan Albu
2003 — conf
Integrating Geometric and Biomechanical Models of a Liver Tumour for Cryosurgery Simulation.
IS4TH
Alexandra Branzan Albu, Jean-Marc Schwartz, Denis Laurendeau, Christian Moisan
2001 A conf
Non-linear Soft Tissue Deformations for the Simulation of Percutaneous Surgeries.
MICCAI
Jean-Marc Schwartz, Ève Langelier, Christian Moisan, Denis Laurendeau