Jayaram K. Udupa

283 papers A* 1A 2B 75Journal 110Unranked 95

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Adapting Segment Anything Model 3 for Concept-Driven Lesion Segmentation in Medical Images: An Experimental Study. CoRR Guoping Xu, Jayaram K. Udupa, Yubing Tong, Xin Long, Ying Zhang, Jie Deng, Weiguo Lu, You Zhang
2026	J	`jnl`	Exploiting DINOv3-Based Self-Supervised Features for Robust Few-Shot Medical Image Segmentation. CoRR Guoping Xu, Jayaram K. Udupa, Weiguo Lu, You Zhang
2026	J	`jnl`	Predicting the Effort Required to Manually Mend Auto-Segmentations. IEEE J. Biomed. Health Informatics Da He, Yubing Tong, Drew A. Torigian, Jayaram K. Udupa
2026	J	`jnl`	Segment anything for video: A comprehensive review of video object segmentation and tracking from past to future. Neurocomputing Guoping Xu, Jayaram K. Udupa, Yajun Yu, Hua-Chieh Shao, Songlin Zhao, Wei Liu, You Zhang
2025	—	`conf`	Eyes Tell the Truth: GazeVal Highlights Shortcomings of Generative AI in Medical Imaging. CVPR Workshops David C. Wong, Bin Wang, Gorkem Durak, Marouane Tliba, Akshay Chaudhari, Aladine Chetouani, Ahmet Enis Çetin, Cagdas Topel, Nicolo Gennaro, Camila Lopes Vendrami, Tugce Agirlar Trabzonlu, Amir Ali Rahsepar, Laetitia Perronne, Matthew Antalek, Onural Ozturk, Gokcan Okur, Andrew C. Gordon, Ayis Pyrros, Frank H. Miller, Amir Borhani, Hatice Savas, Eric M. Hart, Drew A. Torigian, Jayaram K. Udupa, Elizabeth A. Krupinski, Ulas Bagci
2025	J	`jnl`	Eyes Tell the Truth: GazeVal Highlights Shortcomings of Generative AI in Medical Imaging. CoRR David C. Wong, Bin Wang, Gorkem Durak, Marouane Tliba, Akshay Chaudhari, Aladine Chetouani, Ahmet Enis Çetin, Cagdas Topel, Nicolo Gennaro, Camila Lopes Vendrami, Tugce Agirlar Trabzonlu, Amir Ali Rahsepar, Laetitia Perronne, Matthew Antalek, Onural Ozturk, Gokcan Okur, Andrew C. Gordon, Ayis Pyrros, Frank H. Miller, Amir Borhani, Hatice Savas, Eric M. Hart, Drew A. Torigian, Jayaram K. Udupa, Elizabeth A. Krupinski, Ulas Bagci
2025	J	`jnl`	Is the medical image segmentation problem solved? A survey of current developments and future directions. CoRR Guoping Xu, Jayaram K. Udupa, Jax Luo, Songlin Zhao, Yajun Yu, Scott B. Raymond, Hao Peng, Lipeng Ning, Yogesh Rathi, Wei Liu, You Zhang
2025	J	`jnl`	Predicting Risk of Pulmonary Fibrosis Formation in PASC Patients. CoRR Wanying Dou, Gorkem Durak, Koushik Biswas, Ziliang Hong, Andrea Mia Bejar, Elif Keles, Kaan Akin, Sukru Mehmet Erturk, Alpay Medetalibeyoglu, Marc Sala, Alexander Misharin, Hatice Savas, Mary Salvatore, Sachin Jambawalikar, Drew A. Torigian, Jayaram K. Udupa, Ulas Bagci
2025	J	`jnl`	Segment Anything for Video: A Comprehensive Review of Video Object Segmentation and Tracking from Past to Future. CoRR Guoping Xu, Jayaram K. Udupa, Yajun Yu, Hua-Chieh Shao, Songlin Zhao, Wei Liu, You Zhang
2024	J	`jnl`	Efficient MedSAMs: Segment Anything in Medical Images on Laptop. CoRR Jun Ma, Feifei Li, Sumin Kim, Reza Asakereh, Bao-Hiep Le, Dang-Khoa Nguyen-Vu, Alexander Pfefferle, Muxin Wei, Ruochen Gao, Donghang Lyu, Songxiao Yang, Lennart Purucker, Zdravko Marinov, Marius Staring, Haisheng Lu, Thuy Thanh Dao, Xincheng Ye, Zhi Li, Gianluca Brugnara, Philipp Vollmuth, Martha Foltyn-Dumitru, Jaeyoung Cho, Mustafa A. Mahmutoglu, Martin Bendszus, Irada Pflüger, Aditya Rastogi, Dong Ni, Xin Yang, Guang-Quan Zhou, Kaini Wang, Nicholas Heller, Nikolaos Papanikolopoulos, Christopher J. Weight, Yubing Tong, Jayaram K. Udupa, Patrick J. Cahill, Yaqi Wang, Yifan Zhang, Francisco Contijoch, Elliot R. McVeigh, Xin Ye, Shucheng He, Robert Haase, Thomas Pinetz, Alexander Radbruch, Inga Krause, Erich Kobler, Jian He, Yucheng Tang, Haichun Yang, Yuankai Huo, Gongning Luo, Kaisar Kushibar, Jandos Amankulov, Dias Toleshbayev, Amangeldi Mukhamejan, Jan Egger, Antonio Pepe, Christina Gsaxner, Gijs Luijten, Shohei Fujita, Tomohiro Kikuchi, Benedikt Wiestler, Jan S. Kirschke, Ezequiel de la Rosa, Federico Bolelli, Luca Lumetti, Costantino Grana, Kunpeng Xie, Guomin Wu, Behrus Puladi, Carlos Martín-Isla, Karim Lekadir, Víctor M. Campello, Wei Shao, Wayne Brisbane, Hongxu Jiang, Hao Wei, Wu Yuan, Shuangle Li, Yuyin Zhou, Bo Wang
2024	J	`jnl`	GA-Net: A geographical attention neural network for the segmentation of body torso tissue composition. Medical Image Anal. Jian Dai, Tiange Liu, Drew A. Torigian, Yubing Tong, Shiwei Han, Pengju Nie, Jing Zhang, Ran Li, Fei Xie, Jayaram K. Udupa
2024	A	`conf`	GazeGNN: A Gaze-Guided Graph Neural Network for Chest X-ray Classification. WACV Bin Wang, Hongyi Pan, Armstrong Aboah, Zheyuan Zhang, Elif Keles, Drew A. Torigian, Baris Turkbey, Elizabeth A. Krupinski, Jayaram K. Udupa, Ulas Bagci
2024	J	`jnl`	VSmTrans: A hybrid paradigm integrating self-attention and convolution for 3D medical image segmentation. Medical Image Anal. Tiange Liu, Qingze Bai, Drew A. Torigian, Yubing Tong, Jayaram K. Udupa
2024	J	`jnl`	XctDiff: Reconstruction of CT Images with Consistent Anatomical Structures from a Single Radiographic Projection Image. CoRR Qingze Bai, Tiange Liu, Zhi Liu, Yubing Tong, Drew A. Torigian, Jayaram K. Udupa
2023	—	`conf`	A deep-learning-based geographic attention model for body composition tissue segmentation. Biomedical Applications in Molecular, Structural, and Functional Imaging Jian Dai, Jayaram K. Udupa, Drew A. Torigian, Yubing Tong, Pengju Nie, Jing Zhang, Ran Li, Shiwei Han, Tian Liu
2023	—	`conf`	Auto-segmentation of thoracic brachial plexuses for radiation therapy planning. Image-Guided Procedures Ademola Enitan Ilesanmi, Jayaram K. Udupa, Yubing Tong, Tiange Liu, Dewey Odhner, Gargi Pednekar, Sanghita Nag, Sharon Lewis, Joe Camaratta, Steve Owens, Drew A. Torigian
2023	—	`conf`	Auto-segmentation of thoraco-abdominal organs in free breathing pediatric dynamic MRI. Image-Guided Procedures Yusuf Akhtar, Jayaram K. Udupa, Yubing Tong, Tiange Liu, Caiyun Wu, Dewey Odhner, Joseph M. McDonough, Carina Lott, Abbie Clark, Jason B. Anari, Patrick J. Cahill, Drew A. Torigian
2023	—	`conf`	Estimating normal metabolic activity for disease quantification via PET/CT images. Biomedical Applications in Molecular, Structural, and Functional Imaging Jieyu Li, Jayaram K. Udupa, Yubing Tong, Drew A. Torigian
2023	J	`jnl`	GazeGNN: A Gaze-Guided Graph Neural Network for Disease Classification. CoRR Bin Wang, Hongyi Pan, Armstrong Aboah, Zheyuan Zhang, Ahmet Enis Çetin, Drew A. Torigian, Baris Turkbey, Elizabeth A. Krupinski, Jayaram K. Udupa, Ulas Bagci
2023	—	`conf`	Object Localization Using Non-Euclidean Metrics. IoTaIS Ulas Bagci, Jayaram K. Udupa, Xinjian Chen, Drew A. Torigian, Alpay Medetalibeyoglu, Diwei Zhou, Li Bai
2022	J	`jnl`	A Minimally Interactive Method for Labeling Respiratory Phases in Free-Breathing Thoracic Dynamic MRI for Constructing 4D Images. IEEE Trans. Biomed. Eng. Chang-Jian Sun, Jayaram K. Udupa, Yubing Tong, Caiyun Wu, Shuxu Guo, Joseph M. McDonough, Drew A. Torigian, Patrick J. Cahill
2022	B	`conf`	An anatomy-based iteratively searching convolutional neural network for organ localization in CT images. Image Processing Tiange Liu, Meng Tan, Yubing Tong, Drew A. Torigian, Jayaram K. Udupa
2022	B	`conf`	Anatomy-guided deep learning for object localization in medical images. Image Processing Chao Jin, Jayaram K. Udupa, Liming Zhao, Yubing Tong, Dewey Odhner, Gargi Pednekar, Sanghita Nag, Sharon Lewis, Nicholas Poole, Sutirth Mannikeri, Sudarshana Govindasamy, Aarushi Singh, Joe Camaratta, Steve Owens, Drew A. Torigian
2022	B	`conf`	Automatic lung segmentation in dynamic thoracic MRI using two-stage deep convolutional neural networks. Image Processing Lipeng Xie, Jayaram K. Udupa, Yubing Tong, Joseph M. McDonough, Caiyun Wu, Carina Lott, Jason B. Anari, Patrick J. Cahill, Drew A. Torigian
2022	—	`conf`	Bone and bone marrow segmentation from hip 3T magnetic resonance imaging by using local salient anatomy structure to guide deep learning-based object localization and delineation. Image-Guided Procedures Yubing Tong, Zihan Huang, Jayaram K. Udupa, Leihui Tong, Brandon C. Jones, Gregory Chang, Drew A. Torigian, Chamith S. Rajapakse
2022	J	`jnl`	Gradient-Aligned convolution neural network. Pattern Recognit. You Hao, Ping Hu, Shirui Li, Jayaram K. Udupa, Yubing Tong, Hua Li
2022	J	`jnl`	Object recognition in medical images via anatomy-guided deep learning. Medical Image Anal. Chao Jin, Jayaram K. Udupa, Liming Zhao, Yubing Tong, Dewey Odhner, Gargi Pednekar, Sanghita Nag, Sharon Lewis, Nicholas Poole, Sutirth Mannikeri, Sudarshana Govindasamy, Aarushi Singh, Joe Camaratta, Steve Owens, Drew A. Torigian
2022	J	`jnl`	Organ segmentation from computed tomography images using the 3D convolutional neural network: a systematic review. Int. J. Multim. Inf. Retr. Ademola Enitan Ilesanmi, Taiwo Ilesanmi, Oluwagbenga Paul Idowu, Drew A. Torigian, Jayaram K. Udupa
2022	—	`conf`	QdMRI: a system for a comprehensive analysis of thoracic dynamics via dynamic MRI. Image-Guided Procedures Yubing Tong, Jayaram K. Udupa, You Hao, Lipeng Xie, Joseph M. McDonough, Caiyun Wu, Carina Lott, Abigail Clark, Jason B. Anari, Drew A. Torigian, Patrick J. Cahill
2022	—	`conf`	Upper airway motion analysis in obstructive sleep apnea syndrome (OSAS) via dynamic MRI. Biomedical Applications in Molecular, Structural, and Functional Imaging You Hao, Jayaram K. Udupa, Yubing Tong, Drew A. Torigian, Zihan Huang, Rachel M. Kogan, Lipeng Xie, David Wootton, Kokren Choy, Sanghun Sin, Mark E. Wagshul, Raanan Arens
2021	B	`conf`	Anatomy recognition in CT images of head and neck region via precision atlases. Image Processing Jieyu Li, Jayaram K. Udupa, Yubing Tong, Dewey Odhner, Drew A. Torigian
2021	—	`conf`	Automatic upper airway segmentation in static and dynamic MRI via deep convolutional neural networks. Biomedical Applications in Molecular, Structural, and Functional Imaging Lipeng Xie, Jayaram K. Udupa, Yubing Tong, Drew A. Torigian, Zihan Huang, Rachel M. Kogan, Jennifer Ben Nathan, David Wootton, Kokren Choy, Sanghun Sin, Mark E. Wagshul, Raanan Arens
2021	J	`jnl`	DiSegNet: A deep dilated convolutional encoder-decoder architecture for lymph node segmentation on PET/CT images. Comput. Medical Imaging Graph. Guoping Xu, Hanqiang Cao, Jayaram K. Udupa, Yubing Tong, Drew A. Torigian
2021	—	`conf`	Lung parenchymal characterization via thoracic dynamic MRI in normal children and pediatric patients with TIS. Image-Guided Procedures Yubing Tong, Jayaram K. Udupa, Joseph M. McDonough, Carina Lott, Caiyun Wu, Chamith S. Rajapakse, Jason B. Anari, Drew A. Torigian, Patrick J. Cahill
2021	J	`jnl`	OFx: A method of 4D image construction from free-breathing non-gated MRI slice acquisitions of the thorax via optical flux. Medical Image Anal. You Hao, Jayaram K. Udupa, Yubing Tong, Caiyun Wu, Hua Li, Joseph M. McDonough, Carina Lott, Catherine Qiu, Nirupa Galagedera, Jason B. Anari, Drew A. Torigian, Patrick J. Cahill
2021	J	`jnl`	Segmentation evaluation with sparse ground truth data: Simulating true segmentations as perfect/imperfect as those generated by humans. Medical Image Anal. Jieyu Li, Jayaram K. Udupa, Yubing Tong, Lisheng Wang, Drew A. Torigian
2020	—	`conf`	A post-acquisition standardization method for positron emission tomography images. Computer-Aided Diagnosis Aliasghar Mortazi, Jayaram K. Udupa, Yubing Tong, Drew A. Torigian
2020	B	`conf`	Anatomy segmentation evaluation with sparse ground truth data. Image Processing Jieyu Li, Jayaram K. Udupa, Yubing Tong, Lisheng Wang, Drew A. Torigian
2020	—	`conf`	Automatic labeling of respiratory phases and detection of abnormal respiratory signals in free-breathing thoracic dynamic MR image acquisitions based on deep learning. Image-Guided Procedures Chang-Jian Sun, Jayaram K. Udupa, Yubing Tong, Caiyun Wu, Joseph M. McDonough, Catherine Qiu, Carina Lott, Jason B. Anari, Drew A. Torigian, Patrick J. Cahill
2020	J	`jnl`	LinSEM: Linearizing segmentation evaluation metrics for medical images. Medical Image Anal. Jieyu Li, Jayaram K. Udupa, Yubing Tong, Lisheng Wang, Drew A. Torigian
2020	—	`conf`	Localization and segmentation of optimal slices for chest fat quantification in CT via deep learning. Biomedical Applications in Molecular, Structural, and Functional Imaging Jizheng Yi, Jayaram K. Udupa, Yubing Tong, Michaela R. Anderson, David J. Lederer, Jason D. Christie, Drew A. Torigian
2020	—	`conf`	Obtaining the potential number of object models/atlases needed in medical image analysis. Image-Guided Procedures Ze Jin, Jayaram K. Udupa, Drew A. Torigian
2020	—	`conf`	Segmentation of 4D images via space-time neural networks. Biomedical Applications in Molecular, Structural, and Functional Imaging Chang-Jian Sun, Jayaram K. Udupa, Yubing Tong, Sanghun Sin, Mark E. Wagshul, Drew A. Torigian, Raanan Arens
2019	B	`conf`	A General and Balanced Region-Based Metric for Evaluating Medical Image Segmentation Algorithms. ICIP Fábio A. M. Cappabianco, Pedro F. O. Ribeiro, Paulo A. V. de Miranda, Jayaram K. Udupa
2019	J	`jnl`	AAR-RT - A system for auto-contouring organs at risk on CT images for radiation therapy planning: Principles, design, and large-scale evaluation on head-and-neck and thoracic cancer cases. Medical Image Anal. Xingyu Wu, Jayaram K. Udupa, Yubing Tong, Dewey Odhner, Gargi V. Pednekar, Charles B. Simone II, David McLaughlin, Chavanon Apinorasethkul, Ontida Apinorasethkul, John Lukens, Dimitris Mihailidis, Geraldine Shammo, Paul James, Akhil Tiwari, Lisa Wojtowicz, Joseph Camaratta, Drew A. Torigian
2019	—	`conf`	Auto-labeling of respiratory time points in free-breathing thoracic dynamic MR image acquisitions for 4D image construction. Biomedical Applications in Molecular, Structural, and Functional Imaging Chang-Jian Sun, Jayaram K. Udupa, Yubing Tong, Caiyun Wu, Shuxu Guo, Joseph M. McDonough, Drew A. Torigian, Robert M. Campbell Jr.
2019	J	`jnl`	Disease quantification on PET/CT images without explicit object delineation. Medical Image Anal. Yubing Tong, Jayaram K. Udupa, Dewey Odhner, Caiyun Wu, Stephen J. Schuster, Drew A. Torigian
2019	J	`jnl`	How many models/atlases are needed as priors for capturing anatomic population variations? Medical Image Anal. Ze Jin, Jayaram K. Udupa, Drew A. Torigian
2019	B	`conf`	Obtaining the potential number of models/atlases needed for capturing anatomic variations in population images. Image Processing Ze Jin, Jayaram K. Udupa, Drew A. Torigian
2019	—	`conf`	Super-mask-based object localization for auto-contouring in head and neck radiation therapy planning. Image-Guided Procedures Yubing Tong, Jayaram K. Udupa, Drew A. Torigian
2018	—	`conf`	Architectural analysis on dynamic MRI to study thoracic insufficiency syndrome. Image-Guided Procedures Jie Song, Jayaram K. Udupa, Yubing Tong, Liang Xiao, Caiyun Wu, Joseph M. McDonough, Anthony Capraro, Drew A. Torigian, Robert M. Campbell Jr.
2018	—	`conf`	Auto-contouring via automatic anatomy recognition of organs at risk in head and neck cancer on CT images. Image-Guided Procedures Xingyu Wu, Jayaram K. Udupa, Yubing Tong, Dewey Odhner, Gargi V. Pednekar, Charles B. Simone II, David McLaughlin, Chavanon Apinorasethkul, John Lukens, Dimitris Mihailidis, Geraldine Shammo, Paul James, Joseph Camaratta, Drew A. Torigian
2018	B	`conf`	Automatic anatomy recognition using neural network learning of object relationships via virtual landmarks. Image Processing Fengxia Yan, Jayaram K. Udupa, Yubing Tong, Guoping Xu, Dewey Odhner, Drew A. Torigian
2018	—	`conf`	Hierarchical model-based object localization for auto-contouring in head and neck radiation therapy planning. Biomedical Applications in Molecular, Structural, and Functional Imaging Yubing Tong, Jayaram K. Udupa, Xingyu Wu, Dewey Odhner, Gargi Pednekar, Charles B. Simone II, David McLaughlin, Chavanon Apinorasethkul, Geraldine Shammo, Paul James, Joseph Camaratta, Drew A. Torigian
2018	—	`conf`	Image quality and segmentation. Image-Guided Procedures Gargi V. Pednekar, Jayaram K. Udupa, David J. McLaughlin, Xingyu Wu, Yubing Tong, Charles B. Simone II, Joseph Camaratta, Drew A. Torigian
2018	—	`conf`	Lung parenchymal analysis on dynamic MRI in thoracic insufficiency syndrome to assess changes following surgical intervention. Computer-Aided Diagnosis Basavaraj N. Jagadale, Jayaram K. Udupa, Yubing Tong, Caiyun Wu, Joseph M. McDonough, Drew A. Torigian, Robert M. Campbell Jr.
2018	—	`conf`	Quantitative analysis of adipose tissue on chest CT to predict primary graft dysfunction in lung transplant recipients: a novel optimal biomarker approach. Computer-Aided Diagnosis Yubing Tong, Jayaram K. Udupa, Chuang Wang, Caiyun Wu, Gargi Pednekar, Michaela D. Restivo, David J. Lederer, Jason D. Christie, Drew A. Torigian
2018	—	`conf`	Quantitative dynamic MRI (QdMRI) volumetric analysis of pediatric patients with thoracic insufficiency syndrome. Biomedical Applications in Molecular, Structural, and Functional Imaging Yubing Tong, Jayaram K. Udupa, E. Paul Wileyto, Caiyun Wu, Joseph M. McDonough, Anthony Capraro, Oscar H. Mayer, Drew A. Torigian, Robert M. Campbell Jr.
2018	B	`conf`	Thoracic lymph node station recognition on CT images based on automatic anatomy recognition with an optimal parent strategy. Image Processing Guoping Xu, Jayaram K. Udupa, Yubing Tong, Hanqiang Cao, Dewey Odhner, Drew A. Torigian, Xingyu Wu
2018	—	`conf`	Urinary bladder cancer T-staging from T2-weighted MR images using an optimal biomarker approach. Computer-Aided Diagnosis Chuang Wang, Jayaram K. Udupa, Yubing Tong, Jerry Chen, Sriram Venigalla, Dewey Odhner, Thomas J. Guzzo, John Christodouleas, Drew A. Torigian
2017	B	`conf`	A critical analysis of the methods of evaluating MRI brain segmentation algorithms. ICIP Fabio A. M. Cappabianco, Paulo A. V. de Miranda, Jayaram K. Udupa
2017	—	`conf`	Automatic thoracic body region localization. Computer-Aided Diagnosis Peirui Bai, Jayaram K. Udupa, Yubing Tong, Shipeng Xie, Drew A. Torigian
2017	—	`conf`	Disease quantification on PET/CT images without object delineation. Biomedical Applications in Molecular, Structural, and Functional Imaging Yubing Tong, Jayaram K. Udupa, Dewey Odhner, Caiyun Wu, Danielle Fitzpatrick, Nicole Winchell, Stephen J. Schuster, Drew A. Torigian
2017	—	`conf`	Interactive iterative relative fuzzy connectedness lung segmentation on thoracic 4D dynamic MR images. Biomedical Applications in Molecular, Structural, and Functional Imaging Yubing Tong, Jayaram K. Udupa, Dewey Odhner, Caiyun Wu, Yue Zhao, Joseph M. McDonough, Anthony Capraro, Drew A. Torigian, Robert M. Campbell Jr.
2017	J	`jnl`	Retrospective 4D MR image construction from free-breathing slice Acquisitions: A novel graph-based approach. Medical Image Anal. Yubing Tong, Jayaram K. Udupa, Krzysztof Chris Ciesielski, Caiyun Wu, Joseph M. McDonough, David A. Mong, Robert M. Campbell Jr.
2017	—	`conf`	Virtual landmarks. Image-Guided Procedures Yubing Tong, Jayaram K. Udupa, Dewey Odhner, Peirui Bai, Drew A. Torigian
2016	—	`conf`	A general approach to liver lesion segmentation in CT images. Image-Guided Procedures Li Cao, Jayaram K. Udupa, Dewey Odhner, Lidong Huang, Yubing Tong, Drew A. Torigian
2016	—	`conf`	Automatic anatomy recognition on CT images with pathology. Computer-Aided Diagnosis Lidong Huang, Jayaram K. Udupa, Yubing Tong, Dewey Odhner, Drew A. Torigian
2016	—	`conf`	Definition and automatic anatomy recognition of lymph node zones in the pelvis on CT images. Biomedical Applications in Molecular, Structural, and Functional Imaging Yu Liu, Jayaram K. Udupa, Dewey Odhner, Yubing Tong, Shuxu Guo, Rosemary Attor, Danica Reinicke, Drew A. Torigian
2016	—	`conf`	Fat quantification and analysis of lung transplant patients on unenhanced chest CT images based on standardized anatomic space. Biomedical Applications in Molecular, Structural, and Functional Imaging Yubing Tong, Jayaram K. Udupa, Drew A. Torigian, Caiyun Wu, Jason D. Christie, David J. Lederer
2016	—	`conf`	Fat segmentation on chest CT images via fuzzy models. Image-Guided Procedures Yubing Tong, Jayaram K. Udupa, Caiyun Wu, Gargi Pednekar, Janani Rajan Subramanian, David J. Lederer, Jason D. Christie, Drew A. Torigian
2016	—	`conf`	Lymph node detection in IASLC-defined zones on PET/CT images. Computer-Aided Diagnosis Yihua Song, Jayaram K. Udupa, Dewey Odhner, Yubing Tong, Drew A. Torigian
2016	—	`conf`	Optimal atlas construction through hierarchical image registration. Image-Guided Procedures George J. Grevera, Jayaram K. Udupa, Dewey Odhner, Drew A. Torigian
2016	J	`jnl`	Quantitative normal thoracic anatomy at CT. Comput. Medical Imaging Graph. Monica M. S. Matsumoto, Jayaram K. Udupa, Yubing Tong, Babak Saboury, Drew A. Torigian
2016	J	`jnl`	Soft Computing in Medical Image Processing. Comput. Math. Methods Medicine Syoji Kobashi, László G. Nyúl, Jayaram K. Udupa
2015	J	`jnl`	A hybrid method for airway segmentation and automated measurement of bronchial wall thickness on CT. Medical Image Anal. Ziyue Xu, Ulas Bagci, Brent Foster, Awais Mansoor, Jayaram K. Udupa, Daniel J. Mollura
2015	—	`conf`	Automatic anatomy recognition in post-tonsillectomy MR images of obese children with OSAS. Computer-Aided Diagnosis Yubing Tong, Jayaram K. Udupa, Dewey Odhner, Sanghun Sin, Raanan Arens
2015	B	`conf`	Automatic anatomy recognition of sparse objects. Image Processing Liming Zhao, Jayaram K. Udupa, Dewey Odhner, Huiqian Wang, Yubing Tong, Drew A. Torigian
2015	—	`conf`	Body-wide anatomy recognition in PET/CT images. Image-Guided Procedures Huiqian Wang, Jayaram K. Udupa, Dewey Odhner, Yubing Tong, Liming Zhao, Drew A. Torigian
2015	J	`jnl`	Correction to "A Generic Approach to Pathological Lung Segmentation". IEEE Trans. Medical Imaging Awais Mansoor, Ulas Bagci, Ziyue Xu, Brent Foster, Kenneth N. Olivier, Jason M. Elinoff, Anthony F. Suffredini, Jayaram K. Udupa, Daniel J. Mollura
2015	—	`conf`	Interactive non-uniformity correction and intensity standardization of MR images. Image-Guided Procedures Yubing Tong, Jayaram K. Udupa, Dewey Odhner, Shobhit Sharma, Drew A. Torigian
2015	—	`conf`	MR image analytics to characterize upper airway architecture in children with OSAS. Biomedical Applications in Molecular, Structural, and Functional Imaging Yubing Tong, Jayaram K. Udupa, Drew A. Torigian, Monica M. S. Matsumoto, Sanghun Sin, Raanan Arens
2015	—	`conf`	Medical image segmentation using object atlas versus object cloud models. Image-Guided Procedures Renzo Phellan, Alexandre X. Falcão, Jayaram K. Udupa
2014	J	`jnl`	A Generic Approach to Pathological Lung Segmentation. IEEE Trans. Medical Imaging Awais Mansoor, Ulas Bagci, Ziyue Xu, Brent Foster, Kenneth N. Olivier, Jason M. Elinoff, Anthony F. Suffredini, Jayaram K. Udupa, Daniel J. Mollura
2014	—	`conf`	Automatic localization of IASLC-defined mediastinal lymph node stations on CT images using fuzzy models. Computer-Aided Diagnosis Monica M. S. Matsumoto, Niha G. Beig, Jayaram K. Udupa, Steven Archer, Drew A. Torigian
2014	—	`conf`	Automatic thoracic anatomy segmentation on CT images using hierarchical fuzzy models and registration. Image-Guided Procedures Kaioqiong Sun, Jayaram K. Udupa, Dewey Odhner, Yubing Tong, Drew A. Torigian
2014	J	`jnl`	Body-wide hierarchical fuzzy modeling, recognition, and delineation of anatomy in medical images. Medical Image Anal. Jayaram K. Udupa, Dewey Odhner, Liming Zhao, Yubing Tong, Monica M. S. Matsumoto, Krzysztof Chris Ciesielski, Alexandre X. Falcão, Pavithra Vaideeswaran, Victoria Ciesielski, Babak Saboury, Syedmehrdad Mohammadianrasanani, Sanghun Sin, Raanan Arens, Drew A. Torigian
2014	J	`jnl`	CIDI-Lung-Seg: A Single-Click Annotation Tool for Automatic Delineation of Lungs from CT Scans. CoRR Awais Mansoor, Ulas Bagci, Brent Foster, Ziyue Xu, Deborah Douglas, Jeffrey M. Solomon, Jayaram K. Udupa, Daniel J. Mollura
2014	—	`conf`	CIDI-lung-seg: A single-click annotation tool for automatic delineation of lungs from CT scans. EMBC Awais Mansoor, Ulas Bagci, Brent Foster, Ziyue Xu, Deborah Douglas, Jeffrey M. Solomon, Jayaram K. Udupa, Daniel J. Mollura
2014	—	`conf`	Differential and Relaxed Image Foresting Transform for Graph-Cut Segmentation of Multiple 3D Objects. MICCAI (1) Nikolas Moya, Alexandre X. Falcão, Krzysztof Ciesielski, Jayaram K. Udupa
2014	—	`conf`	Improving Atlas-Based Medical Image Segmentation with a Relaxed Object Search. CompIMAGE Renzo Phellan, Alexandre X. Falcão, Jayaram K. Udupa
2014	B	`conf`	Multiple fuzzy object modeling improves sensitivity in automatic anatomy recognition. Image Processing Letícia Rittner, Jayaram K. Udupa, Drew A. Torigian
2014	B	`conf`	Standardized anatomic space for abdominal fat quantification. Image Processing Yubing Tong, Jayaram K. Udupa, Drew A. Torigian
2013	—	`conf`	Automatic segmentation of vocal tract MR images. ISBI Zeynab Raeesy, Sylvia Rueda, Jayaram K. Udupa, John S. Coleman
2013	—	`conf`	Fuzzy connectedness image segmentation for newborn brain extraction in MR images. EMBC Syoji Kobashi, Jayaram K. Udupa
2013	B	`conf`	Fuzzy model based object delineation via energy minimization. Image Processing Krzysztof Chris Ciesielski, Jayaram K. Udupa, Dewey Odhner, Liming Zhao
2013	—	`conf`	Fuzzy model-based body-wide anatomy recognition in medical images. Image-Guided Procedures Jayaram K. Udupa, Dewey Odhner, Yubing Tong, Monica M. S. Matsumoto, Krzysztof Chris Ciesielski, Pavithra Vaideeswaran, Victoria Ciesielski, Babak Saboury, Liming Zhao, Syedmehrdad Mohammadianrasanani, Drew A. Torigian
2013	J	`jnl`	GC-ASM: Synergistic integration of graph-cut and active shape model strategies for medical image segmentation. Comput. Vis. Image Underst. Xinjian Chen, Jayaram K. Udupa, Abass Alavi, Drew A. Torigian
2013	J	`jnl`	Joint graph cut and relative fuzzy connectedness image segmentation algorithm. Medical Image Anal. Krzysztof Chris Ciesielski, Paulo A. V. Miranda, Alexandre X. Falcão, Jayaram K. Udupa
2013	J	`jnl`	Joint segmentation of anatomical and functional images: Applications in quantification of lesions from PET, PET-CT, MRI-PET, and MRI-PET-CT images. Medical Image Anal. Ulas Bagci, Jayaram K. Udupa, Neil Mendhiratta, Brent Foster, Ziyue Xu, Jianhua Yao, Xinjian Chen, Daniel J. Mollura
2013	—	`conf`	Optimal hierarchies for fuzzy object models. Image-Guided Procedures Monica M. S. Matsumoto, Jayaram K. Udupa
2013	—	`conf`	Recognition of upper airway and surrounding structures at MRI in pediatric PCOS and OSAS. Computer-Aided Diagnosis Yubing Tong, Jayaram K. Udupa, Dewey Odhner, Sanghun Sin, Raanan Arens
2012	B	`conf`	A unifying graph-cut image segmentation framework: algorithms it encompasses and equivalences among them. Image Processing Krzysztof Chris Ciesielski, Jayaram K. Udupa, Alexandre X. Falcão, Paulo A. V. Miranda
2012	—	`conf`	Automatic anatomy recognition via fuzzy object models. Image-Guided Procedures Jayaram K. Udupa, Dewey Odhner, Alexandre X. Falcão, Krzysztof Chris Ciesielski, Paulo A. V. Miranda, Monica M. S. Matsumoto, George J. Grevera, Babak Saboury, Drew A. Torigian
2012	J	`jnl`	Brain tissue MR-image segmentation via optimum-path forest clustering. Comput. Vis. Image Underst. Fabio A. M. Cappabianco, Alexandre X. Falcão, Clarissa L. Yasuda, Jayaram K. Udupa
2012	—	`conf`	Co-segmentation of Functional and Anatomical Images. MICCAI (3) Ulas Bagci, Jayaram K. Udupa, Jianhua Yao, Daniel J. Mollura
2012	J	`jnl`	Fuzzy Connectedness Image Segmentation in Graph Cut Formulation: A Linear-Time Algorithm and a Comparative Analysis. J. Math. Imaging Vis. Krzysztof Chris Ciesielski, Jayaram K. Udupa, Alexandre X. Falcão, Paulo A. V. Miranda
2012	B	`conf`	Fuzzy object model based fuzzy connectedness image segmentation of newborn brain MR images. SMC Syoji Kobashi, Jayaram K. Udupa
2012	—	`conf`	GPU-based iterative relative fuzzy connectedness image segmentation. Image-Guided Procedures Ying Zhuge, Jayaram K. Udupa, Krzysztof Chris Ciesielski, Alexandre X. Falcão, Paulo A. V. Miranda, Robert W. Miller
2012	J	`jnl`	Hierarchical Scale-Based Multiobject Recognition of 3-D Anatomical Structures. IEEE Trans. Medical Imaging Ulas Bagci, Xinjian Chen, Jayaram K. Udupa
2012	B	`conf`	Image segmentation by combining the strengths of Relative Fuzzy Connectedness and Graph Cut. ICIP Krzysztof Chris Ciesielski, Paulo A. V. Miranda, Jayaram K. Udupa, Alexandre X. Falcão
2012	J	`jnl`	Medical Image Segmentation by Combining Graph Cuts and Oriented Active Appearance Models. IEEE Trans. Image Process. Xinjian Chen, Jayaram K. Udupa, Ulas Bagci, Ying Zhuge, Jianhua Yao
2011	J	`jnl`	A framework for comparing different image segmentation methods and its use in studying equivalences between level set and fuzzy connectedness frameworks. Comput. Vis. Image Underst. Krzysztof Chris Ciesielski, Jayaram K. Udupa
2011	B	`conf`	Comparison of fuzzy connectedness and graph cut segmentation algorithms. Image Processing Krzysztof Chris Ciesielski, Jayaram K. Udupa, Alexandre X. Falcão, Paulo A. V. Miranda
2011	J	`jnl`	Efficient computation of enclosed volume and surface area from the same triangulated surface representation. Comput. Medical Imaging Graph. Ingela Nyström, George J. Grevera, Bruce Elliot Hirsch, Jayaram K. Udupa
2011	—	`conf`	Elastic image registration via rigid object motion induced deformation. Image-Guided Procedures Xiaofen Zheng, Jayaram K. Udupa, Bruce Elliot Hirsch
2011	—	`conf`	Fuzzy object modeling. Image-Guided Procedures Jayaram K. Udupa, Dewey Odhner, Alexandre X. Falcão, Krzysztof Chris Ciesielski, Paulo A. V. Miranda, Pavithra Vaideeswaran, Shipra Mishra, George J. Grevera, Babak Saboury, Drew A. Torigian
2011	B	`conf`	Global-to-local, shape-based, real and virtual landmarks for shape modeling by recursive boundary subdivision. Image Processing Sylvia Rueda, Jayaram K. Udupa
2011	—	`conf`	Intensity non-standardness affects computer recognition of anatomical structures. Image-Guided Procedures Ulas Bagci, Jayaram K. Udupa, Xinjian Chen
2011	J	`jnl`	Linear Time Algorithms for Exact Distance Transform. J. Math. Imaging Vis. Krzysztof Chris Ciesielski, Xinjian Chen, Jayaram K. Udupa, George J. Grevera
2011	B	`conf`	Orientation estimation of anatomical structures in medical images for object recognition. Image Processing Ulas Bagci, Jayaram K. Udupa, Xinjian Chen
2010	—	`conf`	3D automatic anatomy recognition based on iterative graph-cut-ASM. Image-Guided Procedures Xinjian Chen, Jayaram K. Udupa, Ulas Bagci, Abass Alavi, Drew A. Torigian
2010	J	`jnl`	Affinity functions in fuzzy connectedness based image segmentation I: Equivalence of affinities. Comput. Vis. Image Underst. Krzysztof Chris Ciesielski, Jayaram K. Udupa
2010	J	`jnl`	Affinity functions in fuzzy connectedness based image segmentation II: Defining and recognizing truly novel affinities. Comput. Vis. Image Underst. Krzysztof Chris Ciesielski, Jayaram K. Udupa
2010	J	`jnl`	Ball-Scale Based Hierarchical Multi-Object Recognition in 3D Medical Images CoRR Ulas Bagci, Jayaram K. Udupa, Xinjian Chen
2010	B	`conf`	Ball-scale based hierarchical multi-object recognition in 3D medical images. Image Processing Ulas Bagci, Jayaram K. Udupa, Xinjian Chen
2010	B	`conf`	Fuzzy affinity induced curve evolution. Image Processing Ying Zhuge, Jayaram K. Udupa, Robert W. Miller
2010	—	`conf`	Pathology detection on medical images based in oriented active appearance models. Computer-Aided Diagnosis Xinjian Chen, Jayaram K. Udupa, Abass Alavi, Drew A. Torigian
2010	J	`jnl`	Shape modeling via local curvature scale. Pattern Recognit. Lett. Sylvia Rueda, Jayaram K. Udupa, Li Bai
2010	J	`jnl`	Synergistic arc-weight estimation for interactive image segmentation using graphs. Comput. Vis. Image Underst. Paulo A. V. de Miranda, Alexandre X. Falcão, Jayaram K. Udupa
2010	J	`jnl`	The Influence of Intensity Standardization on Medical Image Registration CoRR Ulas Bagci, Jayaram K. Udupa, Li Bai
2010	—	`conf`	The influence of intensity standardization on medical image registration. Image-Guided Procedures Ulas Bagci, Jayaram K. Udupa, Li Bai
2010	J	`jnl`	The role of intensity standardization in medical image registration. Pattern Recognit. Lett. Ulas Bagci, Jayaram K. Udupa, Li Bai
2009	B	`conf`	A comparison of local and global scale approaches in characterizing shapes. Image Processing Sylvia Rueda, Jayaram K. Udupa, Li Bai
2009	B	`conf`	Affinity functions: recognizing essential parameters in fuzzy connectedness based image segmentation. Image Processing Krzysztof Chris Ciesielski, Jayaram K. Udupa
2009	B	`conf`	Automatic anatomy recognition via multi-object-oriented active shape models. Image Processing Xinjian Chen, Jayaram K. Udupa, Xiaofen Zheng, Abass Alavi, Drew A. Torigian
2009	—	`conf`	Cloud Bank: A Multiple Clouds Model and its Use in MR Brain Image Segmentation. ISBI Paulo A. V. Miranda, Alexandre X. Falcão, Jayaram K. Udupa
2009	—	`conf`	Cluster of workstation based nonrigid image registration using free-form deformation. Image-Guided Procedures Xiaofen Zheng, Jayaram K. Udupa, Xinjian Chen
2009	—	`conf`	Curvature and shape variance based landmark tagging methods for building statistical object models. Image-Guided Procedures Sylvia Rueda, Jayaram K. Udupa, Li Bai
2009	B	`conf`	GC-ASM: synergistic integration of active shape modeling and graph-cut methods. Image Processing Xinjian Chen, Jayaram K. Udupa, Drew A. Torigian, Abass Alavi
2009	J	`jnl`	Image background inhomogeneity correction in MRI via intensity standardization. Comput. Medical Imaging Graph. Ying Zhuge, Jayaram K. Udupa, Jiamin Liu, Punam K. Saha
2009	J	`jnl`	Intensity standardization simplifies brain MR image segmentation. Comput. Vis. Image Underst. Ying Zhuge, Jayaram K. Udupa
2009	B	`conf`	Linear time algorithms for exact distance transform: elaboration on Maurer et al. algorithm. Image Processing Krzysztof Chris Ciesielski, Jayaram K. Udupa, Xinjian Chen, George J. Grevera
2009	J	`jnl`	Oriented Active Shape Models. IEEE Trans. Medical Imaging Jiamin Liu, Jayaram K. Udupa
2009	—	`conf`	nD statistical shape model building via recursive boundary subdivision. Image-Guided Procedures Sylvia Rueda, Jayaram K. Udupa
2008	—	`conf`	A new method of automatic landmark tagging for shape model construction via local curvature scale. Image-Guided Procedures Sylvia Rueda, Jayaram K. Udupa, Li Bai
2008	—	`conf`	Clouds: A model for synergistic image segmentation. ISBI Paulo A. V. Miranda, Alexandre X. Falcão, Jayaram K. Udupa
2008	J	`jnl`	Image filtering via generalized scale. Medical Image Anal. Andre D. A. Souza, Jayaram K. Udupa, Anant Madabhushi
2008	—	`conf`	Landmark selection for shape model construction via equalization of variance. ISBI Sylvia Rueda, Jayaram K. Udupa, Li Bai
2008	—	`conf`	The architecture and performance of CAVASS. Image-Guided Procedures George J. Grevera, Jayaram K. Udupa, Dewey Odhner, Ying Zhuge, Andre D. A. Souza
2007	B	`conf`	A general theory of image segmentation: level set segmentation in the fuzzy connectedness framework. Image Processing Krzysztof Chris Ciesielski, Jayaram K. Udupa
2007	—	`conf`	CAVASS: a computer assisted visualization and analysis software system - visualization aspects. Image-Guided Procedures George J. Grevera, Jayaram K. Udupa, Dewey Odhner, Ying Zhuge, Andre D. A. Souza, Tad Iwanaga, Shipra Mishra
2007	—	`conf`	CAVASS: a computer-assisted visualization and analysis software system - image processing aspects. Image-Guided Procedures Jayaram K. Udupa, George J. Grevera, Dewey Odhner, Ying Zhuge, Andre D. A. Souza, Shipra Mishra, Tad Iwanaga
2007	B	`conf`	Fuzzy shape-based interpolation. Image Processing Punam Kumar Saha, Ying Zhuge, Jayaram K. Udupa
2007	J	`jnl`	Iterative relative fuzzy connectedness for multiple objects with multiple seeds. Comput. Vis. Image Underst. Krzysztof Ciesielski, Jayaram K. Udupa, Punam K. Saha, Ying Zhuge
2007	—	`conf`	Local Scale for Boundary Shape Description: Application in Locating Landmarks Automatically. SIBGRAPI Sylvia Rueda, Jayaram K. Udupa, Li Bai
2007	B	`conf`	Oriented active shape models for 3D segmentation in medical images. Image Processing Jiamin Liu, Jayaram K. Udupa
2006	J	`jnl`	A framework for evaluating image segmentation algorithms. Comput. Medical Imaging Graph. Jayaram K. Udupa, Vicki R. LeBlanc, Ying Zhuge, Celina Imielinska, Hilary Schmidt, Leanne M. Currie, Bruce Elliot Hirsch, James Woodburn
2006	B	`conf`	A new general method of 3D model generation for active shape image segmentation. Image Processing Seong-Jae Lim, Jayaram K. Udupa, Andre D. A. Souza, Yong-Yeon Jeong, Yo-Sung Ho, Drew A. Torigian
2006	J	`jnl`	Generalized scale: Theory, algorithms, and application to image inhomogeneity correction. Comput. Vis. Image Underst. Anant Madabhushi, Jayaram K. Udupa, Andre D. A. Souza
2006	B	`conf`	Iterative live wire and live snake: new user-steered 3D image segmentation paradigms. Image Processing Andre D. A. Souza, Jayaram K. Udupa, George J. Grevera, Yi Sun, Dewey Odhner, Neeti Suri, Mitchell D. Schnall
2006	B	`conf`	Oriented active shape models. Image Processing Jiamin Liu, Jayaram K. Udupa
2006	J	`jnl`	Vectorial scale-based fuzzy-connected image segmentation. Comput. Vis. Image Underst. Ying Zhuge, Jayaram K. Udupa, Punam K. Saha
2005	B	`conf`	A new look at Markov random field (MRF) model-based MR image analysis. Image Processing Tianhu Lei, Jayaram K. Udupa
2005	B	`conf`	Automatic landmark selection for active shape models. Image Processing Andre D. A. Souza, Jayaram K. Udupa
2005	B	`conf`	Generalized ball-scale: theory, algorithms, and application to image inhomogeneity correction. Image Processing Anant Madabhushi, Jayaram K. Udupa, Andre D. A. Souza
2005	B	`conf`	Generalized scale-based image filtering. Image Processing Andre D. A. Souza, Jayaram K. Udupa, Anant Madabhushi
2005	—	`conf`	Go Digital, Go Fuzzy. PReMI Jayaram K. Udupa, George J. Grevera
2005	J	`jnl`	Interplay between intensity standardization and inhomogeneity correction in MR image processing. IEEE Trans. Medical Imaging Anant Madabhushi, Jayaram K. Udupa
2005	B	`conf`	Model-based 3D segmentation of the bones of joints in medical images. Image Processing Jiamin Liu, Jayaram K. Udupa, Punam Kumar Saha, Dewey Odhner, Bruce Elliot Hirsch, Sorin Siegler, Scott Simon, Beth A. Winkelstein
2005	B	`conf`	New methods of MR image intensity standardization via generalized scale. Image Processing Anant Madabhushi, Jayaram K. Udupa
2005	—	`conf`	T-shell rendering and manipulation. Image-Guided Procedures George J. Grevera, Jayaram K. Udupa, Dewey Odhner
2005	J	`jnl`	Volume rendering in the presence of partial volume effects. IEEE Trans. Medical Imaging Andre D. A. Souza, Jayaram K. Udupa, Punam K. Saha
2004	B	`conf`	Delineation operating characteristic (DOC) curve for assessing the accuracy behavior of image segmentation algorithms. Image Processing Jayaram K. Udupa, Ying Zhuge
2004	—	`conf`	GMIP: generalized maximum intensity projection. Image-Guided Procedures George J. Grevera, Jayaram K. Udupa
2004	B	`conf`	Generalized scale: theory, algorithms, and application to image inhomogeneity correction. Image Processing Anant Madabhushi, Jayaram K. Udupa, Andre D. A. Souza
2004	J	`jnl`	Iso-shaping rigid bodies for estimating their motion from image sequences. IEEE Trans. Medical Imaging Punam K. Saha, Jayaram K. Udupa, Alexandre X. Falcão, Bruce Elliot Hirsch, Sorin Siegler
2004	B	`conf`	Multiple sclerosis lesion quantification in MR images by using vectorial scale-based relative fuzzy connectedness. Image Processing Ying Zhuge, Jayaram K. Udupa, László G. Nyúl
2003	B	`conf`	Alignment of multimodality, 2D and 3D breast images. Image Processing George J. Grevera, Jayaram K. Udupa
2003	—	`conf`	Combined approach of shell and shear-warp rendering for efficient volume visualization. Image-Guided Procedures Alexandre Xavier Falcão, Leonardo M. Rocha, Jayaram K. Udupa
2003	J	`jnl`	Fuzzy connectedness and image segmentation. Proc. IEEE Jayaram K. Udupa, Punam K. Saha
2003	B	`conf`	Image analysis: reconstructing the true scene from noisy images. Image Processing Tianhu Lei, Jayaram K. Udupa
2003	J	`jnl`	Incorporating a Measure of Local Scale in Voxel-Based 3D Image Registration. IEEE Trans. Medical Imaging László G. Nyúl, Jayaram K. Udupa, Punam K. Saha
2003	B	`conf`	Interaction between noise suppression and inhomogeneity correction in MRI. Image Processing Albert Montillo, Jayaram K. Udupa, Leon Axel, Dimitris N. Metaxas
2003	B	`conf`	Membership-based multiprotocol MR brain image segmentation. Image Processing Ying Zhuge, Jiamin Liu, Jayaram K. Udupa
2003	B	`conf`	Model-based 3D segmentation of the bones of the ankle and subtalar joints in MR images. Image Processing Jiamin Liu, Jayaram K. Udupa, Punam K. Saha, Dewey Odhner, Bruce Elliot Hirsch, Sorin Siegler
2003	J	`jnl`	Performance evaluation of finite normal mixture model-based image segmentation techniques. IEEE Trans. Image Process. Tianhu Lei, Jayaram K. Udupa
2003	J	`jnl`	Scanning the issue - special issue on emerging medical imaging technology. Proc. IEEE Christian Roux, Jayaram K. Udupa
2003	—	`conf`	Segmentation and Evaluation of Adipose Tissue from Whole Body MRI Scans. MICCAI (1) Yinpeng Jin, Celina Imielinska, Andrew Laine, Jayaram K. Udupa, Wei Shen, Steven B. Heymsfield
2003	B	`conf`	Tensor scale-based fuzzy connectedness image segmentation. Image Processing Punam K. Saha, Jayaram K. Udupa
2003	B	`conf`	Tensor scale-based image registration. Image Processing Punam K. Saha, Hui Zhang, Jayaram K. Udupa, James C. Gee
2003	B	`conf`	The interplay between intensity standardization and field inhomogeneity correction in MR image processing. Image Processing Anant Madabhushi, Jayaram K. Udupa
2003	B	`conf`	Theoretical assessment of image analysis: statistical vs structural approaches. Image Processing Tianhu Lei, Jayaram K. Udupa
2002	—	`conf`	Area of and volume enclosed by digital and triangulated surfaces. Image-Guided Procedures Ingela Nyström, Jayaram K. Udupa, George J. Grevera, Bruce Elliot Hirsch
2002	B	`conf`	Axiomatic path strength definition for fuzzy connectedness and the case of multiple seeds. Image Processing Jayaram K. Udupa, Punam K. Saha
2002	—	`conf`	Comparative analysis of shell rendering and shear-warp rendering. Image-Guided Procedures Alexandre Xavier Falcão, Leonardo M. Rocha, Jayaram K. Udupa
2002	J	`jnl`	Fuzzy-connected 3D image segmentation at interactive speeds. Graph. Model. László G. Nyúl, Alexandre X. Falcão, Jayaram K. Udupa
2002	J	`jnl`	Go digital, go fuzzy. Pattern Recognit. Lett. Jayaram K. Udupa, George J. Grevera
2002	B	`conf`	Iso-shaping rigid bodies for estimating their motion from image sequences. Image Processing Punam K. Saha, Jayaram K. Udupa, Bruce Elliot Hirsch
2002	J	`jnl`	Medical image reconstruction, processing, visualization and analysis: The MIPG perspective. IEEE Trans. Medical Imaging Jayaram K. Udupa, Gabor T. Herman
2002	B	`conf`	Methodology for evaluating image-segmentation algorithms. Image Processing Jayaram K. Udupa, Vicki R. LeBlanc, Hilary Schmidt, Celina Imielinska, Punam K. Saha, George J. Grevera, Ying Zhuge, Leanne M. Currie, Pat Molholt, Yinpeng Jin
2002	B	`conf`	Protocol-independent brain MRI segmentation method. Image Processing László G. Nyúl, Jayaram K. Udupa
2002	J	`jnl`	Relative Fuzzy Connectedness and Object Definition: Theory, Algorithms, and Applications in Image Segmentation. IEEE Trans. Pattern Anal. Mach. Intell. Jayaram K. Udupa, Punam K. Saha, Roberto A. Lotufo
2002	J	`jnl`	Scale-Based Diffusive Image Filtering Preserving Boundary Sharpness and Fine Structures. IEEE Trans. Medical Imaging Punam K. Saha, Jayaram K. Udupa
2002	B	`conf`	Scale-based method for correcting background intensity variation in acquired images. Image Processing Ying Zhuge, Jayaram K. Udupa, Jiamin Liu, Punam K. Saha, Tad Iwanaga
2002	B	`conf`	Vectoral-scale-based fuzzy-connected image segmentation. Image Processing Ying Zhuge, Jayaram K. Udupa, Punam K. Saha
2002	—	`conf`	Volume rendering in the presence of partial volume effects. Image-Guided Procedures Andre D. A. Souza, Jayaram K. Udupa, Punam K. Saha
2001	—	`conf`	3DVIEWNIX-AVS: a software package for separate visualization of arteries and veins in CE-MRA images. Image-Guided Procedures Tianhu Lei, Jayaram K. Udupa, Dewey Odhner, Punam K. Saha
2001	J	`jnl`	A sensor array processing approach to object region detection. IEEE Trans. Biomed. Eng. Tianhu Lei, Jayaram K. Udupa
2001	J	`jnl`	An in vivo analysis of the motion of the peri-talar joint complex based on MR imaging. IEEE Trans. Biomed. Eng. Eric Stindel, Jayaram K. Udupa, Bruce Elliot Hirsch, Dewey Odhner
2001	J	`jnl`	Artery-Vein Separation via MRA - An Image Processing Approach. IEEE Trans. Medical Imaging Tianhu Lei, Jayaram K. Udupa, Punam K. Saha, Dewey Odhner
2001	B	`conf`	Automatic bone-free rendering of cerebral aneurysms via 3D CTA. Image Processing Punam K. Saha, John M. Abrahams, Jayaram K. Udupa
2001	B	`conf`	Brain tumor segmentation in MRI by using the fuzzy connectedness method. Image Processing Jian-Guo Liu, Jayaram K. Udupa, David B. Hackney, Gul Moonis
2001	J	`jnl`	Breast Tissue Density Quantification via Digitized Mammograms. IEEE Trans. Medical Imaging Punam K. Saha, Jayaram K. Udupa, Emily F. Conant, Dev P. Chakraborty
2001	J	`jnl`	Fuzzy Connected Object Delineation: Axiomatic Path Strength Definition and the Case of Multiple Seeds. Comput. Vis. Image Underst. Punam K. Saha, Jayaram K. Udupa
2001	A	`conf`	Hybrid Segmentation of Anatomical Data. MICCAI Celina Imielinska, Dimitris N. Metaxas, Jayaram K. Udupa, Yinpeng Jin, Ting Chen
2001	B	`conf`	Multiobject relative fuzzy connectedness and its implications in image segmentation. Image Processing Jayaram K. Udupa, Punam K. Saha
2001	—	`conf`	New automatic mode of visualizing the colon via Cine CT. Image-Guided Procedures Jayaram K. Udupa, Dewey Odhner, Harvey C. Eisenberg
2001	J	`jnl`	Optimum Image Thresholding via Class Uncertainty and Region Homogeneity. IEEE Trans. Pattern Anal. Mach. Intell. Punam K. Saha, Jayaram K. Udupa
2001	J	`jnl`	Relative Fuzzy Connectedness among Multiple Objects: Theory, Algorithms, and Applications in Image Segmentation. Comput. Vis. Image Underst. Punam K. Saha, Jayaram K. Udupa
2001	J	`jnl`	Scale-based Diffusive Image Filtering Preserving Boundary Sharpness and Fine Structures. IEEE Trans. Medical Imaging Punam K. Saha, Jayaram K. Udupa
2001	—	`conf`	T-shell rendering. Image-Guided Procedures George J. Grevera, Jayaram K. Udupa, Dewey Odhner
2001	B	`conf`	Task-specific comparison of 3D image registration methods. Image Processing László G. Nyúl, Jayaram K. Udupa, Punam K. Saha
2001	—	`conf`	Three-dimensional rendering in medicine: some common misconceptions. Image-Guided Procedures Jayaram K. Udupa
2000	J	`jnl`	A 3D generalization of user-steered live-wire segmentation. Medical Image Anal. Alexandre X. Falcão, Jayaram K. Udupa
2000	J	`jnl`	An Order of Magnitude Faster Isosurface Rendering in Software on a PC than Using Dedicated, General Purpose Rendering Hardware. IEEE Trans. Vis. Comput. Graph. George J. Grevera, Jayaram K. Udupa, Dewey Odhner
2000	J	`jnl`	An Ultra-Fast User-Steered Image Segementation Paradigm: Live-Wire-On-The-Fly. IEEE Trans. Medical Imaging Alexandre X. Falcão, Jayaram K. Udupa, Flávio Keidi Miyazawa
2000	J	`jnl`	Analysis of Volumetric Images. Comput. Vis. Image Underst. A. Ardeshir Goshtasby, Milan Sonka, Jayaram K. Udupa
2000	J	`jnl`	Clutter-free volume rendering for magnetic resonance angiography using fuzzy connectedness. Int. J. Imaging Syst. Technol. Bowen L. Rice Jr., Jayaram K. Udupa
2000	B	`conf`	Fuzzy-connected 3D image segmentation at interactive speeds. Image Processing László G. Nyúl, Alexandre Xavier Falcão, Jayaram K. Udupa
2000	—	`conf`	Go Digital, Go Fuzzy. DGCI Jayaram K. Udupa
2000	B	`conf`	Multiprotocol MR image segmentation in multiple sclerosis: experience with over 1000 studies. Image Processing Jayaram K. Udupa, László G. Nyúl, Yulin Ge, Robert I. Grossman
2000	J	`jnl`	New Variants of a Method of MRI Scale Standardization. IEEE Trans. Medical Imaging László G. Nyúl, Jayaram K. Udupa, Xuan Zhang
2000	B	`conf`	New optimum thresholding method using region homogeneity and class uncertainty. Image Processing Punam K. Saha, Jayaram K. Udupa
2000	J	`jnl`	Scale-Based Fuzzy Connected Image Segmentation: Theory, Algorithms, and Validation. Comput. Vis. Image Underst. Punam K. Saha, Jayaram K. Udupa, Dewey Odhner
2000	B	`conf`	Scale-based filtering of medical images. Image Processing Punam K. Saha, Jayaram K. Udupa
1999	J	`jnl`	A Characterization of the Geometric Architecture of the Peritalar Joint Complex via MRI: An Aid to Classification of Foot Type. IEEE Trans. Medical Imaging Eric Stindel, Jayaram K. Udupa, Bruce Elliot Hirsch, Dewey Odhner
1999	J	`jnl`	A Task-Specific Evaluation of Three-Dimensional Image Interpolation Techniques. IEEE Trans. Medical Imaging George J. Grevera, Jayaram K. Udupa, Yukio Miki
1999	—	`conf`	A study of 3D imaging approaches in medicine. Discrete Mathematical Problems with Medical Applications Jayaram K. Udupa
1999	—	`conf`	Fast Digital Perspective Shell Rendering. SIBGRAPI Giulliano P. Carnielli, Alexandre X. Falcão, Jayaram K. Udupa
1999	B	`conf`	Fuzzy connected object definition in images with respect to co-objects. Image Processing Jayaram K. Udupa, Punam K. Saha, Roberto de Alencar Lotufo
1999	B	`conf`	Near-automatic quantification of breast tissue glandularity via digitized mammograms. Image Processing Punam K. Saha, Jayaram K. Udupa, Emily F. Conant, Dev Prasad Chakraborty
1999	—	`conf`	New Variants of a Method of MRI Scale Normalization. IPMI László G. Nyúl, Jayaram K. Udupa
1999	B	`conf`	Scale-based fuzzy connectivity: a novel image segmentation methodology and its validation. Image Processing Punam K. Saha, Jayaram K. Udupa
1999	B	`conf`	Ultrafast user-steered image segmentation paradigm: live-wire-on-the-fly. Image Processing Alexandre Xavier Falcão, Jayaram K. Udupa, Flávio Keidi Miyazawa
1998	J	`jnl`	An Objective Comparison of Three-Dimensional Image Interpolation Methods. IEEE Trans. Medical Imaging George J. Grevera, Jayaram K. Udupa
1998	J	`jnl`	Analysis of in vivo 3-D internal kinematics of the joints of the foot [MRI analysis]. IEEE Trans. Biomed. Eng. Jayaram K. Udupa, Bruce Elliot Hirsch, Howard J. Hillstrom, Gary R. Bauer, J. Bruce Kneeland
1998	J	`jnl`	User-Steered Image Segmentation Paradigms: Live Wire and Live Lane. Graph. Model. Image Process. Alexandre X. Falcão, Jayaram K. Udupa, Supun Samarasekera, Shoba Sharma, Bruce Elliot Hirsch, Roberto de Alencar Lotufo
1997	J	`jnl`	Multiple Sclerosis Lesion Quantification Using Fuzzy-Connectedness Principles. IEEE Trans. Medical Imaging Jayaram K. Udupa, Luogang Wei, Supun Samarasekera, Yukio Miki, Mark A. van Buchem, Robert I. Grossman
1997	B	`conf`	Objective comparison of interpolation methods. Image Processing George J. Grevera, Jayaram K. Udupa
1997	B	`conf`	Pentium PC-based craniofacial 3D imaging and analysis system. Image Processing Jayaram K. Udupa, Jie Tian, David C. Hemmy
1997	B	`conf`	System for the comprehensive analysis of multiple sclerosis lesion load based on MR imagery. Image Processing Jayaram K. Udupa, Luogang Wei, Yukio Miki, Robert I. Grossman
1996	B	`conf`	Deformation of n-dimensional digital Jordan surfaces. Image Processing George J. Grevera, Jayaram K. Udupa
1996	B	`conf`	Detection and quantification of MS lesions using fuzzy topological principles. Image Processing Jayaram K. Udupa, Luogang Wei, Supun Samarasekera, Yukio Miki, Mark A. van Buchem, Robert I. Grossman
1996	J	`jnl`	Fuzzy Connectedness and Object Definition: Theory, Algorithms, and Applications in Image Segmentation. CVGIP Graph. Model. Image Process. Jayaram K. Udupa, Supun Samarasekera
1996	J	`jnl`	Shape-based interpolation of multidimensional grey-level images. IEEE Trans. Medical Imaging George J. Grevera, Jayaram K. Udupa
1996	B	`conf`	User-steered image boundary segmentation. Image Processing Alexandre Xavier Falcão, Jayaram K. Udupa, Supun Samarasekera, Bruce Elliot Hirsch
1994	—	`conf`	Fuzzy objects and their boundaries. VBC Jayaram K. Udupa, Supun Samarasekera, Kootala P. Venugopal, George J. Grevera
1994	—	`conf`	Kinematics of the tarsal joints via 3D MR imaging. VBC Bruce Elliot Hirsch, Jayaram K. Udupa, Supun Samarasekera
1994	J	`jnl`	Multidimensional Digital Boundaries. CVGIP Graph. Model. Image Process. Jayaram K. Udupa
1994	—	`conf`	Three-dimensional imaging in biomedical computing: principles, algorithms, and systems. VBC Jayaram K. Udupa
1993	J	`jnl`	Imaging transforms for visualizing surfaces and volumes. J. Digit. Imaging Jayaram K. Udupa, Roberto J. Gonçalves
1993	J	`jnl`	Shell rendering. IEEE Computer Graphics and Applications Jayaram K. Udupa, Dewey Odhner
1992	J	`jnl`	A justification of a fast surface tracking algorithm. CVGIP Graph. Model. Image Process. T. Yung Kong, Jayaram K. Udupa
1992	—	`conf`	Boundary detection via dynamic programming. VBC Jayaram K. Udupa, Supun Samarasekera, William A. Barrett
1992	—	`conf`	Combining shape-based and gray-level interpolations. VBC Roberto A. Lutufo, Gabor T. Herman, Jayaram K. Udupa
1992	—	`conf`	Joint kinematics via three-dimensional MR imaging. VBC Jayaram K. Udupa, Bruce Elliot Hirsch, Supun Samarasekera, Roberto J. Gonçalves
1992	J	`jnl`	Multidimensional data format specification: A generalization of the American College of Radiology-National Electric Manufacturers Association standards. J. Digit. Imaging Jayaram K. Udupa, Hsiu-Mei Hung, Dewey Odhner, Roberto J. Gonçalves
1992	—	`conf`	Multidimensional image and structure data representation: a generalization of the ACR-NEMA standards (Proceedings Only). VBC Jayaram K. Udupa, Hsiu-Mei Hung, Dewey Odhner, Roberto J. Gonçalves, Supun Samarasekera
1991	J	`jnl`	Fast visualization, manipulation, and analysis of binary volumetric objects. IEEE Computer Graphics and Applications Jayaram K. Udupa, Dewey Odhner
1990	J	`jnl`	Boundary and object labelling in three-dimensional images. Comput. Vis. Graph. Image Process. Jayaram K. Udupa, Venkatramana G. Ajjanagadde
1990	J	`jnl`	Registration of 3D objects and surfaces. IEEE Computer Graphics and Applications Klaus D. Tönnies, Jayaram K. Udupa, Gabor T. Herman, Isaac L. I. Wornom III, Steven R. Buchman
1989	J	`jnl`	Fast surface tracking in three-dimensional binary images. Comput. Vis. Graph. Image Process. Dan Gordon, Jayaram K. Udupa
1985	J	`jnl`	Large Software Problems for Small Computers: An Example from Medical Imaging. IEEE Softw. Gideon Frieder, Gabor T. Herman, Craig Meyer, Jayaram K. Udupa
1985	J	`jnl`	Surface Shading in the Cuberille Environment. IEEE Computer Graphics and Applications Lih-Shyang Chen, Gabor T. Herman, R. Anthony Reynolds, Jayaram K. Udupa
1984	J	`jnl`	Interactive Surgical Planning. IEEE Computer Graphics and Applications Linda J. Brewster, Sushma S. Trivedi, Heang K. Tuy, Jayaram K. Udupa
1983	A*	`conf`	Model Driven Visualization of Coronary Arteries. IJCAI Gabor T. Herman, Leon Axel, Ruzena Bajcsy, Harold L. Kundel, R. LeVeen, Jayaram K. Udupa, G. Wolf
1982	J	`jnl`	Boundary Detection in Multidimensions. IEEE Trans. Pattern Anal. Mach. Intell. Jayaram K. Udupa, Sargur N. Srihari, Gabor T. Herman
1982	J	`jnl`	Interactive segmentation and boundary surface formation for 3-D digital images. Comput. Graph. Image Process. Jayaram K. Udupa
1977	J	`jnl`	Machine Visualization of Three-Dimensional Objects via Skeletal Transformations. IEEE Trans. Syst. Man Cybern. Jayaram K. Udupa, Ivaturi S. N. Murthy
1977	J	`jnl`	New Concepts for Three-Dimensional Shape Analysis. IEEE Trans. Computers Jayaram K. Udupa, Ivaturi S. N. Murthy
1975	J	`jnl`	Some new concepts for encoding line patterns. Pattern Recognit. Jayaram K. Udupa, Ivaturi S. N. Murthy
1974	J	`jnl`	A search algorithm for skeletonization of thick patterns. Comput. Graph. Image Process. Ivaturi S. N. Murthy, Jayaram K. Udupa