Javier Sancho

13 papers Journal 10Unranked 3
YearRankTypeTitle / Venue / Authors
2025 J jnl
ProteinLIPs: a web server for identifying highly polar and poorly packed interfaces in proteins.
Bioinform.
Helena García-Cebollada, Alfonso López, Vladimir Espinosa Angarica, Juan José Galano-Frutos, Javier Sancho
2023 J jnl
Accurate and efficient constrained molecular dynamics of polymers using Newton's method and special purpose code.
Comput. Phys. Commun.
Lorién López-Villellas, Carl Christian Kjelgaard Mikkelsen, Juan José Galano-Frutos, Santiago Marco-Sola, Jesús Alastruey-Benedé, Pablo Ibáñez, Miquel Moretó, Javier Sancho, Pablo García-Risueño
2023 J jnl
Calculation of Protein Folding Thermodynamics Using Molecular Dynamics Simulations.
J. Chem. Inf. Model.
Juan José Galano-Frutos, Francho Nerín-Fonz, Javier Sancho
2021 J jnl
Erratum to: Molecular dynamics simulations for genetic interpretation in protein coding regions: where we are, where to go and when.
Briefings Bioinform.
Juan José Galano-Frutos, Helena García-Cebollada, Javier Sancho
2021 J jnl
Molecular dynamics simulations for genetic interpretation in protein coding regions: where we are, where to go and when.
Briefings Bioinform.
Juan José Galano-Frutos, Helena García-Cebollada, Javier Sancho
2019 J jnl
Accurate Calculation of Barnase and SNase Folding Energetics Using Short Molecular Dynamics Simulations and an Atomistic Model of the Unfolded Ensemble: Evaluation of Force Fields and Water Models.
J. Chem. Inf. Model.
Juan José Galano-Frutos, Javier Sancho
2012 J jnl
Defining the Nature of Thermal Intermediate in 3 State Folding Proteins: Apoflavodoxin, a Study Case.
PLoS Comput. Biol.
Rebeca García-Fandiño, Pau Bernadó, Sara Ayuso-Tejedor, Javier Sancho, Modesto Orozco
2009 J jnl
ProtSA: a web application for calculating sequence specific protein solvent accessibilities in the unfolded ensemble.
BMC Bioinform.
Jorge Estrada, Pau Bernadó, Martin Blackledge, Javier Sancho
2009 J jnl
VSDMIP: virtual screening data management on an integrated platform.
J. Comput. Aided Mol. Des.
Rubén Gil-Redondo, Jorge Estrada, Antonio Morreale, Fernando Herranz, Javier Sancho, Angel R. Ortiz
2005 J jnl
Design of Ligand Binding to an Engineered Protein Cavity Using Virtual Screening and Thermal Up-shift Evaluation.
J. Comput. Aided Mol. Des.
Claudia Machicado, Jon López-Llano, Santiago Cuesta-López, Marta Bueno, Javier Sancho
2004 — conf
The Long and Short Flavodoxins: Evolutionary Origin and Role of the Differentiating Loop in Apoflavodoxin Structure.
Spanish Bioinformatics Conference
Marta Bueno, Jesus Tejero, Javier Sancho
2004 — conf
Virtual Screening of Small Molecules Binding to an Engineered Protein Cavity in Flavodoxin using Freely Available Docking Software.
Spanish Bioinformatics Conference
Jorge Estrada, Marta Bueno, Adrián Velázquez, Nunilo Cremades, Javier Sancho
2004 — conf
What Works (and What Doesn't) in Estimating the Change in Free Energy due to Point Mutations in the Protein Interior.
Spanish Bioinformatics Conference
Marta Bueno, Carlos J. Camacho, Javier Sancho