Jaume Bonet

11 papers Journal 11
YearRankTypeTitle / Venue / Authors
2023 J jnl
SBILib: a handle for protein modeling and engineering.
Bioinform.
Patrick Gohl, Jaume Bonet, Oriol Fornes, Joan Planas-Iglesias, Narcis Fernandez-Fuentes, Baldo Oliva
2022 J jnl
RosettaSurf - A surface-centric computational design approach.
PLoS Comput. Biol.
Andreas Scheck, Stéphane Rosset, Michaël Defferrard, Andreas Loukas, Jaume Bonet, Pierre Vandergheynst, Bruno E. Correia
2021 J jnl
SPServer: split-statistical potentials for the analysis of protein structures and protein-protein interactions.
BMC Bioinform.
Joaquim Aguirre-Plans, Alberto Meseguer, Ruben Molina-Fernandez, Manuel Alejandro Marín-López, Gaurav Jumde, Kevin Casanova, Jaume Bonet, Oriol Fornes, Narcis Fernandez-Fuentes, Baldo Oliva
2019 J jnl
rstoolbox - a Python library for large-scale analysis of computational protein design data and structural bioinformatics.
BMC Bioinform.
Jaume Bonet, Zander Harteveld, Fabian Sesterhenn, Andreas Scheck, Bruno E. Correia
2018 J jnl
On the mechanisms of protein interactions: predicting their affinity from unbound tertiary structures.
Bioinform.
Manuel Alejandro Marín-López, Joan Planas-Iglesias, Joaquim Aguirre-Plans, Jaume Bonet, Javier García-García, Narcis Fernandez-Fuentes, Baldo Oliva
2018 J jnl
Rosetta FunFolDes - A general framework for the computational design of functional proteins.
PLoS Comput. Biol.
Jaume Bonet, Sarah Wehrle, Karen Schriever, Che Yang, Anne Billet, Fabian Sesterhenn, Andreas Scheck, Freyr Sverrisson, Barbora Veselkova, Sabrina Vollers, Roxanne Lourman, Mélanie Villard, Stéphane Rosset, Thomas Krey, Bruno E. Correia
2014 J jnl
ArchDB 2014: structural classification of loops in proteins.
Nucleic Acids Res.
Jaume Bonet, Joan Planas-Iglesias, Javier García-García, Manuel Alejandro Marín-López, Narcis Fernandez-Fuentes, Baldo Oliva
2014 J jnl
Frag'r'Us: knowledge-based sampling of protein backbone conformations for
Bioinform.
Jaume Bonet, Joan Segura, Joan Planas-Iglesias, Baldomero Oliva, Narcis Fernandez-Fuentes
2014 J jnl
Smotifs as structural local descriptors of supersecondary elements: classification, completeness and applications.
Bio Algorithms Med Syst.
Jaume Bonet, András Fiser, Baldo Oliva, Narcis Fernandez-Fuentes
2013 J jnl
iLoops: a protein-protein interaction prediction server based on structural features.
Bioinform.
Joan Planas-Iglesias, Manuel Alejandro Marín-López, Jaume Bonet, Javier García-García, Baldo Oliva
2007 J jnl
Characterization of Protein Hubs by Inferring Interacting Motifs from Protein Interactions.
PLoS Comput. Biol.
Ramon Aragues, Andrej Sali, Jaume Bonet, Marc A. Martí-Renom, Baldo Oliva