Jason L. Stein

21 papers Journal 10Unranked 11

Year	Rank	Type	Title / Venue / Authors
2023	J	`jnl`	Genetic variations within human gained enhancer elements affect human brain sulcal morphology. NeuroImage Hervé Lemaître, Yann Le Guen, Amanda K. Tilot, Jason L. Stein, Cathy Philippe, Jean-François Mangin, Simon E. Fisher, Vincent Frouin
2023	—	`conf`	High Throughput Deep Model of 3D Nucleus Instance Segmentation by Stereo Stitching Contextual Gaps. ISBI Ziquan Wei, Tingting Dan, Jiaqi Ding, Carolyn M. McCormick, Felix A. Kyere, Minjeong Kim, David Borland, Jason L. Stein, Guorong Wu
2022	—	`conf`	Cell Counting with Inverse Distance Kernel and Self-supervised Learning. MOVI@MICCAI Yue Guo, David Borland, Carolyn M. McCormick, Jason L. Stein, Guorong Wu, Ashok Kumar Krishnamurthy
2022	J	`jnl`	SAU-Net: A Unified Network for Cell Counting in 2D and 3D Microscopy Images. IEEE ACM Trans. Comput. Biol. Bioinform. Yue Guo, Oleh Krupa, Jason L. Stein, Guorong Wu, Ashok Kumar Krishnamurthy
2021	—	`conf`	3D Nucleus Instance Segmentation for Whole-Brain Microscopy Images. IPMI Junbo Ma, Oleh Krupa, Madison Rose Glass, Carolyn M. McCormick, David Borland, Minjeong Kim, Jason L. Stein, Guorong Wu
2021	J	`jnl`	Segmentor: a tool for manual refinement of 3D microscopy annotations. BMC Bioinform. David Borland, Carolyn M. McCormick, Niyanta K. Patel, Oleh Krupa, Jessica T. Mory, Alvaro A. Beltran, Tala M. Farah, Carla F. Escobar-Tomlienovich, Sydney S. Olson, Minjeong Kim, Guorong Wu, Jason L. Stein
2019	—	`conf`	Cross Modality Microscopy Segmentation via Adversarial Adaptation. IWBBIO (2) Yue Guo, Qian Wang, Oleh Krupa, Jason L. Stein, Guorong Wu, Kira Bradford, Ashok K. Krishnamurthy
2019	—	`conf`	SAU-Net: A Universal Deep Network for Cell Counting. BCB Yue Guo, Jason L. Stein, Guorong Wu, Ashok K. Krishnamurthy
2017	—	`conf`	Accurate and High Throughput Cell Segmentation Method for Mouse Brain Nuclei Using Cascaded Convolutional Neural Network. Patch-MI@MICCAI Qian Wang, Shaoyu Wang, Xiaofeng Zhu, Tianyi Liu, Zachary Humphrey, Vladimir Ghukasyan, Mike Conway, Erik Scott, Giulia Fragola, Kira Bradford, Mark J. Zylka, Ashok K. Krishnamurthy, Jason L. Stein, Guorong Wu
2013	—	`conf`	Exhaustive Search of the SNP-SNP Interactome Identifies Epistatic Effects on Brain Volume in Two Cohorts. MICCAI (3) Derrek P. Hibar, Jason L. Stein, Neda Jahanshad, Omid Kohannim, Arthur W. Toga, Katie McMahon, Greig I. de Zubicaray, Grant W. Montgomery, Nicholas G. Martin, Margaret J. Wright, Michael W. Weiner, Paul M. Thompson
2013	—	`conf`	Genetic Clustering on the Hippocampal Surface for Genome-Wide Association Studies. MICCAI (2) Derrek P. Hibar, Sarah E. Medland, Jason L. Stein, Sungeun Kim, Li Shen, Andrew J. Saykin, Greig I. de Zubicaray, Katie McMahon, Grant W. Montgomery, Nicholas G. Martin, Margaret J. Wright, Srdjan Djurovic, Ingrid Agartz, Ole A. Andreassen, Paul M. Thompson
2012	—	`conf`	Predicting temporal lobe volume on MRI from genotypes using L ISBI Omid Kohannim, Derrek P. Hibar, Neda Jahanshad, Jason L. Stein, Xue Hua, Arthur W. Toga, Clifford R. Jack, Michael W. Weiner, Paul M. Thompson
2012	J	`jnl`	Sparse reduced-rank regression detects genetic associations with voxel-wise longitudinal phenotypes in Alzheimer's disease. NeuroImage Maria Vounou, Eva Janousová, Robin Wolz, Jason L. Stein, Paul M. Thompson, Daniel Rueckert, Giovanni Montana
2012	J	`jnl`	Structural and functional neuroimaging phenotypes in dysbindin mutant mice. NeuroImage Evan Lutkenhoff, Katherine H. Karlsgodt, Boris Gutman, Jason L. Stein, Paul M. Thompson, Tyrone D. Cannon, J. David Jentsch
2011	—	`conf`	Boosting power to detect genetic associations in imaging using multi-locus, genome-wide scans and ridge regression. ISBI Omid Kohannim, Derrek P. Hibar, Jason L. Stein, Neda Jahanshad, Clifford R. Jack, Michael Weiner, Arthur W. Toga, Paul M. Thompson
2011	—	`conf`	Principal components regression: Multivariate, gene-based tests in imaging genomics. ISBI Derrek P. Hibar, Jason L. Stein, Omid Kohannim, Neda Jahanshad, Clifford R. Jack, Michael Weiner, Arthur W. Toga, Paul M. Thompson
2011	J	`jnl`	Voxelwise gene-wide association study (vGeneWAS): Multivariate gene-based association testing in 731 elderly subjects. NeuroImage Derrek P. Hibar, Jason L. Stein, Omid Kohannim, Neda Jahanshad, Andrew J. Saykin, Li Shen, Sungeun Kim, Nathan Pankratz, Tatiana Foroud, Matthew J. Huentelman, Steven G. Potkin, Clifford R. Jack Jr., Michael W. Weiner, Arthur W. Toga, Paul M. Thompson
2010	J	`jnl`	Genome-wide analysis reveals novel genes influencing temporal lobe structure with relevance to neurodegeneration in Alzheimer's disease. NeuroImage Jason L. Stein, Xue Hua, Jonathan H. Morra, Suh Lee, Derrek P. Hibar, April J. Ho, Alex D. Leow, Arthur W. Toga, Jae Hoon Sul, Hyun Min Kang, Eleazar Eskin, Andrew J. Saykin, Li Shen, Tatiana Foroud, Nathan Pankratz, Matthew J. Huentelman, David W. Craig, Jill D. Gerber, April N. Allen, Jason J. Corneveaux, Dietrich A. Stephan, Jennifer Webster, Bryan M. DeChairo, Steven G. Potkin, Clifford R. Jack Jr., Michael W. Weiner, Paul M. Thompson
2010	J	`jnl`	Voxelwise genome-wide association study (vGWAS). NeuroImage Jason L. Stein, Xue Hua, Suh Lee, April J. Ho, Alex D. Leow, Arthur W. Toga, Andrew J. Saykin, Li Shen, Tatiana Foroud, Nathan Pankratz, Matthew J. Huentelman, David W. Craig, Jill D. Gerber, April N. Allen, Jason J. Corneveaux, Bryan M. DeChairo, Steven G. Potkin, Michael W. Weiner, Paul M. Thompson, Alzheimer's Disease Neuroimaging Initiative
2008	J	`jnl`	Corrigendum to "A validated network of effective amygdala connectivity" [NeuroImage 36 (2007) 736-745]. NeuroImage Jason L. Stein, Lisa M. Wiedholz, Danielle S. Bassett, Daniel R. Weinberger, Caroline F. Zink, Venkata S. Mattay, Andreas Meyer-Lindenberg
2007	J	`jnl`	A validated network of effective amygdala connectivity. NeuroImage Jason L. Stein, Lisa M. Wiedholz, Danielle S. Bassett, Daniel R. Weinberger, Caroline F. Zink, Venkata S. Mattay, Andreas Meyer-Lindenberg