Jason D. Bakos

62 papers A 1B 4C 4Misc 11Journal 25Unranked 17
YearRankTypeTitle / Venue / Authors
2025 — conf
A Decomposition-Based Memristive Crossbar Solver and FPGA-Accelerated Hardware Implementation.
ACM Great Lakes Symposium on VLSI
Suyash Vardhan Singh, Anzhelika Kolinko, Md Hasibul Amin, Ramtin Zand, Jason D. Bakos
2025 — conf
CrossNAS: A Cross-Layer Neural Architecture Search Framework for PIM Systems.
ACM Great Lakes Symposium on VLSI
Md Hasibul Amin, Mohammadreza Mohammadi, Jason D. Bakos, Ramtin Zand
2025 J jnl
CrossNAS: A Cross-Layer Neural Architecture Search Framework for PIM Systems.
CoRR
Md Hasibul Amin, Mohammadreza Mohammadi, Jason D. Bakos, Ramtin Zand
2025 J jnl
DA-VinCi: A Deep-Learning Accelerator Overlay Using In-Memory Computing.
ACM Trans. Reconfigurable Technol. Syst.
M. D. Arafat Kabir, Nathaniel Fredricks, Tendayi Kamucheka, Joel Mandebi, Miaoqing Huang, Jason D. Bakos, David Andrews
2025 Misc conf
N-TORC: Native Tensor Optimizer for Real-Time Constraints.
FCCM
Suyash Vardhan Singh, Iftakhar Ahmad, David Andrews, Miaoqing Huang, Austin R. J. Downey, Jason D. Bakos
2025 J jnl
N-TORC: Native Tensor Optimizer for Real-time Constraints.
CoRR
Suyash Vardhan Singh, Iftakhar Ahmad, David Andrews, Miaoqing Huang, Austin R. J. Downey, Jason D. Bakos
2025 Misc conf
Optimized Coding and Parameter Selection for Efficient FPGA Design of Attention Mechanisms.
FCCM
Ehsan Kabir, Austin R. J. Downey, Jason D. Bakos, David Andrews, Miaoqing Huang
2025 A conf
Resource Scheduling for Real-Time Machine Learning.
FPGA
Suyash Vardhan Singh, Iftakhar Ahmad, David Andrews, Miaoqing Huang, Austin R. J. Downey, Jason D. Bakos
2024 J jnl
A Runtime-Adaptive Transformer Neural Network Accelerator on FPGAs.
CoRR
Ehsan Kabir, Austin R. J. Downey, Jason D. Bakos, David Andrews, Miaoqing Huang
2024 — conf
Earthen Embankment Monitoring Using LiDAR Data by Randomized Consensus of Topological Data Analysis.
DDDAS/Infosymbiotics
Austin R. J. Downey, Jie Wei, A. Q. M. Zohuruzzaman, Paul T. Schrader, Sadik Khan, Jason D. Bakos, Weicong Feng, Erik Blasch, Erika Ardiles-Cruz
2024 J jnl
FAMOUS: Flexible Accelerator for the Attention Mechanism of Transformer on UltraScale+ FPGAs.
CoRR
Ehsan Kabir, M. D. Arafat Kabir, Austin R. J. Downey, Jason D. Bakos, David Andrews, Miaoqing Huang
2024 — conf
Famous: Flexible Accelerator for the Attention Mechanism of Transformer on Ultrascale+ FPGAs.
ICFPT
Ehsan Kabir, M. D. Arafat Kabir, Austin R. J. Downey, Jason D. Bakos, David Andrews, Miaoqing Huang
2024 — conf
Fast Topological Data Analysis Features for Nonstationary Time Series.
DDDAS/Infosymbiotics
Daniel A. Salazar Martinez, Arman Razmarashooli, Yang Kang Chua, Simon Laflamme, Chao Hu, Paul T. Schrader, Austin R. J. Downey, Jason D. Bakos, Negash Begashaw, Gurcan Comert, Jacob Dodson
2024 B conf
IMAGine: An In-Memory Accelerated GEMV Engine Overlay.
FPL
M. D. Arafat Kabir, Tendayi Kamucheka, Nathaniel Fredricks, Joel Mandebi, Jason D. Bakos, Miaoqing Huang, David Andrews
2024 J jnl
IMAGine: An In-Memory Accelerated GEMV Engine Overlay.
CoRR
M. D. Arafat Kabir, Tendayi Kamucheka, Nathaniel Fredricks, Joel Mandebi, Jason D. Bakos, Miaoqing Huang, David Andrews
2024 J jnl
Introduction to the Special Section on FPGA 2023.
ACM Trans. Reconfigurable Technol. Syst.
Suhaib A. Fahmy, Jason D. Bakos
2024 — conf
ProTEA: Programmable Transformer Encoder Acceleration on FPGA.
SC Workshops
Ehsan Kabir, Jason D. Bakos, David Andrews, Miaoqing Huang
2024 J jnl
ProTEA: Programmable Transformer Encoder Acceleration on FPGA.
CoRR
Ehsan Kabir, Jason D. Bakos, David Andrews, Miaoqing Huang
2024 Misc conf
The BRAM is the Limit: Shattering Myths, Shaping Standards, and Building Scalable PIM Accelerators.
FCCM
M. D. Arafat Kabir, Tendayi Kamucheka, Nathaniel Fredricks, Joel Mandebi, Jason D. Bakos, Miaoqing Huang, David Andrews
2024 J jnl
The BRAM is the Limit: Shattering Myths, Shaping Standards, and Building Scalable PIM Accelerators.
CoRR
M. D. Arafat Kabir, Tendayi Kamucheka, Nathaniel Fredricks, Joel Mandebi, Jason D. Bakos, Miaoqing Huang, David Andrews
2024 J jnl
XbarSim: A Decomposition-Based Memristive Crossbar Simulator.
CoRR
Anzhelika Kolinko, Md Hasibul Amin, Ramtin Zand, Jason D. Bakos
2023 B conf
Accelerating LSTM-Based High-Rate Dynamic System Models.
FPL
Ehsan Kabir, Daniel Coble, Joud N. Satme, Austin R. J. Downey, Jason D. Bakos, David Andrews, Miaoqing Huang
2023 J jnl
Accelerating LSTM-based High-Rate Dynamic System Models.
CoRR
Ehsan Kabir, Daniel Coble, Joud N. Satme, Austin R. J. Downey, Jason D. Bakos, David Andrews, Miaoqing Huang
2023 B conf
FPGA Processor In Memory Architectures (PIMs): Overlay or Overhaul ?
FPL
M. D. Arafat Kabir, Ehsan Kabir, Joshua Hollis, Eli Levy-Mackay, Atiyehsadat Panahi, Jason D. Bakos, Miaoqing Huang, David Andrews
2023 J jnl
FPGA Processor In Memory Architectures (PIMs): Overlay or Overhaul ?
CoRR
M. D. Arafat Kabir, Ehsan Kabir, Joshua Hollis, Eli Levy-Mackay, Atiyehsadat Panahi, Jason D. Bakos, Miaoqing Huang, David Andrews
2023 Misc conf
Making BRAMs Compute: Creating Scalable Computational Memory Fabric Overlays.
FCCM
M. D. Arafat Kabir, Joshua Hollis, Atiyehsadat Panahi, Jason D. Bakos, Miaoqing Huang, David Andrews
2023 J jnl
NAPOLY: A Non-deterministic Automata Processor OverLaY.
ACM Trans. Reconfigurable Technol. Syst.
Rasha Karakchi, Jason D. Bakos
2023 C conf
Optimal Sampling Methodologies for High-rate Structural Twinning.
FUSION
Alexander B. Vereen, Emmanuel A. Ogunniyi, Austin R. J. Downey, Erik Blasch, Jason D. Bakos, Jacob Dodson
2022 Misc conf
High-Rate Machine Learning for Forecasting Time-Series Signals.
FCCM
Atiyehsadat Panahi, Ehsan Kabir, Austin R. J. Downey, David Andrews, Miaoqing Huang, Jason D. Bakos
2019 — conf
An Overlay Architecture for Pattern Matching.
ASAP
Rasha Karakchi, Charles Daniels, Jason D. Bakos
2019 — conf
OpenVX Graph Optimization for Visual Processor Units.
ASAP
Madushan Abeysinghe, Jesse Villarreal, Lucas Weaver, Jason D. Bakos
2018 J jnl
Introduction to the Special Section on FCCM'16.
ACM Trans. Reconfigurable Technol. Syst.
Jason D. Bakos
2017 — conf
A Dynamically Reconfigurable Automata Processor Overlay.
ReConFig
Rasha Karakchi, Lothrop O. Richards, Jason D. Bakos
2016 — conf
High-level synthesis of a genomic database search engine.
ReConFig
Rasha Karakchi, Jordan A. Bradshaw, Jason D. Bakos
2016 Misc conf
Two-Hit Filter Synthesis for Genomic Database Search.
FCCM
Jordan A. Bradshaw, Rasha Karakchi, Jason D. Bakos
2015 J jnl
Memory Interface Design for 3D Stencil Kernels on a Massively Parallel Memory System.
ACM Trans. Reconfigurable Technol. Syst.
Zheming Jin, Jason D. Bakos
2014 J jnl
Large-Scale Pairwise Sequence Alignments on a Large-Scale GPU Cluster.
IEEE Des. Test
I. Savran, Yang Gao, Jason D. Bakos
2014 — conf
Lucas-Kanade Optical Flow estimation on the TI C66x digital signal processor.
HPEC
Fan Zhang, Yang Gao, Jason D. Bakos
2014 — conf
Sparse matrix-vector multiply on the Keystone II Digital Signal Processor.
HPEC
Yang Gao, Fan Zhang, Jason D. Bakos
2013 J jnl
A Heuristic Scheduler for Port-Constrained Floating-Point Pipelines.
Int. J. Reconfigurable Comput.
Zheming Jin, Jason D. Bakos
2013 J jnl
Accelerating frequent itemset mining on graphics processing units.
J. Supercomput.
Fan Zhang, Yan Zhang, Jason D. Bakos
2013 — conf
Accuracy, cost, and performance tradeoffs for floating-point accumulation.
ReConFig
Krishna K. Nagar, Jason D. Bakos
2013 J jnl
An FPGA-Based Accelerator for Frequent Itemset Mining.
ACM Trans. Reconfigurable Technol. Syst.
Yan Zhang, Fan Zhang, Zheming Jin, Jason D. Bakos
2013 J jnl
Extending the BEAGLE library to a multi-FPGA platform.
BMC Bioinform.
Zheming Jin, Jason D. Bakos
2013 Misc conf
Memory Access Scheduling on the Convey HC-1.
FCCM
Zheming Jin, Jason D. Bakos
2013 — conf
Sparse matrix-vector multiply on the Texas Instruments C6678 Digital Signal Processor.
ASAP
Yang Gao, Jason D. Bakos
2012 J jnl
A Cluster-on-a-Chip Architecture for High-Throughput Phylogeny Search.
IEEE Trans. Parallel Distributed Syst.
Tiffany M. Mintz, Jason D. Bakos
2011 Misc conf
A Sparse Matrix Personality for the Convey HC-1.
FCCM
Krishna K. Nagar, Jason D. Bakos
2011 C conf
Frequent Itemset Mining on Large-Scale Shared Memory Machines.
CLUSTER
Yan Zhang, Fan Zhang, Jason D. Bakos
2011 C conf
GPApriori: GPU-Accelerated Frequent Itemset Mining.
CLUSTER
Fan Zhang, Yan Zhang, Jason D. Bakos
2010 J jnl
FPGA acceleration of the phylogenetic likelihood function for Bayesian MCMC inference methods.
BMC Bioinform.
Stephanie Zierke, Jason D. Bakos
2010 J jnl
High-Performance Heterogeneous Computing with the Convey HC-1.
Comput. Sci. Eng.
Jason D. Bakos
2009 — conf
An integrated reduction technique for a double precision accumulator.
HPRCTA@SC
Krishna K. Nagar, Yan Zhang, Jason D. Bakos
2009 Misc conf
Exploiting Matrix Symmetry to Improve FPGA-Accelerated Conjugate Gradient.
FCCM
Jason D. Bakos, Krishna K. Nagar
2008 J jnl
A Special-Purpose Architecture for Solving the Breakpoint Median Problem.
IEEE Trans. Very Large Scale Integr. Syst.
Jason D. Bakos, Panormitis E. Elenis
2007 Misc conf
FPGA Acceleration of Gene Rearrangement Analysis.
FCCM
Jason D. Bakos
2007 C conf
FPGA Acceleration of Phylogeny Reconstruction for Whole Genome Data.
BIBE
Jason D. Bakos, Panormitis E. Elenis, Jijun Tang
2007 J jnl
Lightweight Error Correction Coding for System-Level Interconnects.
IEEE Trans. Computers
Jason D. Bakos, Donald M. Chiarulli, Steven P. Levitan
2006 Misc conf
A Reconfigurable Distributed Computing Fabric Exploiting Multilevel Parallelism.
FCCM
Charles L. Cathey, Jason D. Bakos, Duncan A. Buell
2006 B conf
Predictive Load Balancing for Interconnected FPGAs.
FPL
Jason D. Bakos, Charles L. Cathey, Allen Michalski
2005 — conf
Area, power, and pin efficient bus transceiver using multi-bit-differential signaling.
ISCAS (2)
Donald M. Chiarulli, Jason D. Bakos, Joel R. Martin, Steven P. Levitan
2004 — conf
Active substrates for optoelectronic interconnect.
ISCAS (5)
Donald M. Chiarulli, Steven P. Levitan, Jason D. Bakos, Charlie Kuznia