Jaques Reifman

64 papers B 2Misc 3Journal 49Unranked 10
YearRankTypeTitle / Venue / Authors
2024 J jnl
A 3-D whole-body human thermoregulatory model to simulate cold-induced vasodilation in the hands and feet.
Comput. Biol. Medicine
Manpreet Singh, Jaques Reifman, Jose E. Rubio
2023 J jnl
Effects of Stature and Load Carriage on the Running Biomechanics of Healthy Men.
IEEE Trans. Biomed. Eng.
Junfei Tong, Adhitya V. Subramani, Vivek Kote, Michael Baggaley, W. Brent Edwards, Jaques Reifman
2022 J jnl
Enabling data-limited chemical bioactivity predictions through deep neural network transfer learning.
J. Comput. Aided Mol. Des.
Ruifeng Liu, Srinivas Laxminarayan, Jaques Reifman, Anders Wallqvist
2022 J jnl
Wearables Detect Malaria Early in a Controlled Human-Infection Study.
IEEE Trans. Biomed. Eng.
Sidhartha Chaudhury, Chenggang Yu, Ruifeng Liu, Kamal Kumar, Samantha Hornby, Christopher Duplessis, Joel M. Sklar, Judith E. Epstein, Jaques Reifman
2020 J jnl
Individual Differences in Women During Walking Affect Tibial Response to Load Carriage: The Importance of Individualized Musculoskeletal Finite-Element Models.
IEEE Trans. Biomed. Eng.
Chun Xu, Jaques Reifman, Michael Baggaley, W. Brent Edwards, Ginu Unnikrishnan
2019 J jnl
An increase in sleep slow waves predicts better working memory performance in healthy individuals.
NeuroImage
Fabio Ferrarelli, Rachel Kaskie, Srinivas Laxminarayan, Sridhar Ramakrishnan, Jaques Reifman, Anne Germain
2017 J jnl
A strategy for evaluating pathway analysis methods.
BMC Bioinform.
Chenggang Yu, Hyung Jun Woo, Xueping Yu, Tatsuya Oyama, Anders Wallqvist, Jaques Reifman
2016 J jnl
DBSecSys 2.0: a database of
BMC Bioinform.
Vesna Memisevic, Kamal Kumar, Nela Zavaljevski, David DeShazer, Anders Wallqvist, Jaques Reifman
2016 J jnl
Metabolic host responses to malarial infection during the intraerythrocytic developmental cycle.
BMC Syst. Biol.
Anders Wallqvist, Xin Fang, Shivendra G. Tewari, Ping Ye, Jaques Reifman
2015 J jnl
Biofilm Formation Mechanisms of
PLoS Comput. Biol.
Francisco G. Vital-Lopez, Jaques Reifman, Anders Wallqvist
2015 J jnl
Computational Identification of Mechanistic Factors That Determine the Timing and Intensity of the Inflammatory Response.
PLoS Comput. Biol.
Sridevi Nagaraja, Jaques Reifman, Alexander Yu. Mitrophanov
2015 J jnl
Human Core Temperature Prediction for Heat-Injury Prevention.
IEEE J. Biomed. Health Informatics
Srinivas Laxminarayan, Mark J. Buller, William J. Tharion, Jaques Reifman
2015 J jnl
Mining Host-Pathogen Protein Interactions to Characterize
PLoS Comput. Biol.
Vesna Memisevic, Nela Zavaljevski, Seesandra V. Rajagopala, Keehwan Kwon, Rembert Pieper, David DeShazer, Jaques Reifman, Anders Wallqvist
2014 — conf
A comparison of alerting strategies for hemorrhage identification during prehospital emergency transport.
EMBC
Jianbo Liu, Andrew T. Reisner, Shwetha Edla, Jaques Reifman
2014 J jnl
A computational study of the respiratory airflow characteristics in normal and obstructed human airways.
Comput. Biol. Medicine
Bora Sul, Anders Wallqvist, Michael J. Morris, Jaques Reifman, Vineet Rakesh
2014 — conf
A platform for real-time acquisition and analysis of physiological data in hospital emergency departments.
EMBC
Jason B. Smith, Andrew T. Reisner, Shwetha Edla, Jianbo Liu, Stephanie Liddle, Jaques Reifman
2014 J jnl
DBSecSys: a database of Burkholderia mallei secretion systems.
BMC Bioinform.
Vesna Memievi, Kamal Kumar, Li Cheng, Nela Zavaljevski, David DeShazer, Anders Wallqvist, Jaques Reifman
2014 J jnl
Exploiting large-scale drug-protein interaction information for computational drug repurposing.
BMC Bioinform.
Ruifeng Liu, Narender Singh, Gregory J. Tawa, Anders Wallqvist, Jaques Reifman
2014 — conf
The matching of sinus arrhythmia to respiration: Are trauma patients without serious injury comparable to healthy laboratory subjects?
EMBC
Xiaoxiao Chen, Andrew T. Reisner, Liangyou Chen, Shwetha Edla, Jaques Reifman
2013 J jnl
Bridging the gap between gene expression and metabolic phenotype via kinetic models.
BMC Syst. Biol.
Francisco G. Vital-Lopez, Anders Wallqvist, Jaques Reifman
2013 J jnl
Reconstituting protein interaction networks using parameter-dependent domain-domain interactions.
BMC Bioinform.
Vesna Memievi, Anders Wallqvist, Jaques Reifman
2012 — conf
Individualized performance prediction during total sleep deprivation: Accounting for trait vulnerability to sleep loss.
EMBC
Sridhar Ramakrishnan, Srinivas Laxminarayan, David Thorsley, Nancy J. Wesensten, Thomas J. Balkin, Jaques Reifman
2012 J jnl
Inferring high-confidence human protein-protein interactions.
BMC Bioinform.
Xueping Yu, Anders Wallqvist, Jaques Reifman
2012 J jnl
Modeling Phenotypic Metabolic Adaptations of
PLoS Comput. Biol.
Xin Fang, Anders Wallqvist, Jaques Reifman
2012 J jnl
PathNet: A tool for pathway analysis using topological information.
Source Code Biol. Medicine
Bhaskar Dutta, Anders Wallqvist, Jaques Reifman
2012 J jnl
Quantitative Predictions of Binding Free Energy Changes in Drug-Resistant Influenza Neuraminidase.
PLoS Comput. Biol.
Daniel R. Ripoll, Ilja V. Khavrutskii, Sidhartha Chaudhury, Jin Liu, Robert A. Kuschner, Anders Wallqvist, Jaques Reifman
2012 J jnl
QuartetS-DB: a large-scale orthology database for prokaryotes and eukaryotes inferred by evolutionary evidence.
BMC Bioinform.
Chenggang Yu, Valmik Desai, Li Cheng, Jaques Reifman
2012 J jnl
Thermodynamic Basis for the Emergence of Genomes during Prebiotic Evolution.
PLoS Comput. Biol.
Hyung-June Woo, Ravi Vijaya Satya, Jaques Reifman
2011 — conf
Predicting human subcutaneous glucose concentration in real time: A universal data-driven approach.
EMBC
Yinghui Lu, Srinivasan Rajaraman, W. Kenneth Ward, Robert A. Vigersky, Jaques Reifman
2011 J jnl
SNIT: SNP identification for strain typing.
Source Code Biol. Medicine
Ravi Vijaya Satya, Nela Zavaljevski, Jaques Reifman
2011 — conf
Using confidence intervals to assess the reliability of instantaneous heart rate and respiratory rate.
EMBC
Xiaoxiao Chen, Liangyou Chen, Andrew T. Reisner, Jaques Reifman
2010 J jnl
A high-throughput pipeline for the design of real-time PCR signatures.
BMC Bioinform.
Ravi Vijaya Satya, Kamal Kumar, Nela Zavaljevski, Jaques Reifman
2010 J jnl
A real-time algorithm for predicting core temperature in humans.
IEEE Trans. Inf. Technol. Biomed.
Andrei V. Gribok, Mark J. Buller, Reed W. Hoyt, Jaques Reifman
2010 J jnl
Accelerating Biomedical Research in Designing Diagnostic Assays, Drugs, and Vaccines.
Comput. Sci. Eng.
Anders Wallqvist, Nela Zavaljevski, Ravi Vijaya Satya, Rajkumar Bondugula, Valmik Desai, Xin Hu, Kamal Kumar, Michael S. Lee, In-Chul Yeh, Chenggang Yu, Jaques Reifman
2010 J jnl
Development and analysis of an in vivo-compatible metabolic network of Mycobacterium tuberculosis.
BMC Syst. Biol.
Xin Fang, Anders Wallqvist, Jaques Reifman
2010 J jnl
The Importance of Different Frequency Bands in Predicting Subcutaneous Glucose Concentration in Type 1 Diabetic Patients.
IEEE Trans. Biomed. Eng.
Yinghui Lu, Andrei V. Gribok, W. Kenneth Ward, Jaques Reifman
2010 J jnl
Universal glucose models for predicting subcutaneous glucose concentration in humans.
IEEE Trans. Inf. Technol. Biomed.
Adiwinata Gani, Andrei V. Gribok, Yinghui Lu, W. Kenneth Ward, Robert A. Vigersky, Jaques Reifman
2009 J jnl
A Novel Scoring Approach for Protein Co-Purification Data Reveals High Interaction Specificity.
PLoS Comput. Biol.
Xueping Yu, Joseph Ivanic, Anders Wallqvist, Jaques Reifman
2009 J jnl
A systems biology framework for modeling metabolic enzyme inhibition of Mycobacterium tuberculosis.
BMC Syst. Biol.
Xin Fang, Anders Wallqvist, Jaques Reifman
2009 J jnl
Predicting Subcutaneous Glucose Concentration in Humans: Data-Driven Glucose Modeling.
IEEE Trans. Biomed. Eng.
Adiwinata Gani, Andrei V. Gribok, Srinivasan Rajaraman, W. Kenneth Ward, Jaques Reifman
2008 J jnl
A high-throughput pipeline for designing microarray-based pathogen diagnostic assays.
BMC Bioinform.
Ravi Vijaya Satya, Nela Zavaljevski, Kamal Kumar, Jaques Reifman
2008 J jnl
DOVIS: an implementation for high-throughput virtual screening using AutoDock.
BMC Bioinform.
Shuxing Zhang, Kamal Kumar, Xiaohui Jiang, Anders Wallqvist, Jaques Reifman
2008 J jnl
Decision tool for the early diagnosis of trauma patient hypovolemia.
J. Biomed. Informatics
Liangyou Chen, Thomas M. McKenna, Andrew T. Reisner, Andrei V. Gribok, Jaques Reifman
2008 J jnl
Evidence of probabilistic behaviour in protein interaction networks.
BMC Syst. Biol.
Joseph Ivanic, Anders Wallqvist, Jaques Reifman
2008 J jnl
Individualized Short-Term Core Temperature Prediction in Humans Using Biomathematical Models.
IEEE Trans. Biomed. Eng.
Andrei V. Gribok, Mark J. Buller, Jaques Reifman
2008 J jnl
Probing the Extent of Randomness in Protein Interaction Networks.
PLoS Comput. Biol.
Joseph Ivanic, Anders Wallqvist, Jaques Reifman
2008 J jnl
The development of PIPA: an integrated and automated pipeline for genome-wide protein function annotation.
BMC Bioinform.
Chenggang Yu, Nela Zavaljevski, Valmik Desai, Seth Johnson, Fred J. Stevens, Jaques Reifman
2007 J jnl
Error bounds for data-driven models of dynamical systems.
Comput. Biol. Medicine
Nicholas O. Oleng, Andrei V. Gribok, Jaques Reifman
2007 J jnl
Oligonucleotide fingerprint identification for microarray-based pathogen diagnostic assays.
Bioinform.
Waibhav Tembe, Nela Zavaljevski, Elizabeth A. Bode, Catherine Chase, Jeanne Geyer, Leonard P. Wasieloski, Gary Benson, Jaques Reifman
2007 J jnl
The physiology analysis system: An integrated approach for warehousing, management and analysis of time-series physiology data.
Comput. Methods Programs Biomed.
Thomas M. McKenna, Gagandeep Bawa, Kamal Kumar, Jaques Reifman
2006 J jnl
Application of Information Technology: A Method for Automatic Identification of Reliable Heart Rates Calculated from ECG and PPG Waveforms.
J. Am. Medical Informatics Assoc.
Chenggang Yu, Zhenqiu Liu, Thomas M. McKenna, Andrew T. Reisner, Jaques Reifman
2006 — conf
Regularization of Body Core Temperature Prediction during Physical Activity.
EMBC
Andrei V. Gribok, Thomas M. McKenna, Jaques Reifman
2005 — conf
Classifying noisy protein sequence data: a case study of immunoglobulin light chains.
ISMB (Supplement of Bioinformatics)
Chenggang Yu, Nela Zavaljevski, Fred J. Stevens, Kelly Yackovich, Jaques Reifman
2005 Misc conf
Identification of Genomic Signatures for the Design of Assays for the Detection and Monitoring of Anthrax Threats.
Pacific Symposium on Biocomputing
Sorin Draghici, Purvesh Khatri, Yanhong Liu, Kitty J. Chase, Elizabeth A. Bode, David A. Kulesh, Leonard P. Wasieloski, David A. Norwood, Jaques Reifman
2004 — conf
Life Sign Decision Support Algorithms.
MedInfo
C. Thomas Savell, Maurizio Borsotto, Jaques Reifman, Reed W. Hoyt
2003 — conf
Gene Selection for Multi-Class Prediction of Microarray Data.
CSB
Dechang Chen, Dong Hua, Jaques Reifman, Xiuzhen Cheng
2002 Misc conf
Combat medical informatics: present and future.
AMIA
Reed W. Hoyt, Jaques Reifman, Trinka S. Coster, Mark J. Buller
2002 J jnl
Multilayer perceptron for nonlinear programming.
Comput. Oper. Res.
Jaques Reifman, Earl E. Feldman
2002 J jnl
Support vector machines with selective kernel scaling for protein classification and identification of key amino acid positions.
Bioinform.
Nela Zavaljevski, Fred J. Stevens, Jaques Reifman
2002 J jnl
White Paper: Military Research Needs in Biomedical Informatics.
J. Am. Medical Informatics Assoc.
Jaques Reifman, Gary R. Gilbert, Lawrence M. Fagan, Richard M. Satava
1999 B conf
Nonlinear programming with feedforward neural networks.
IJCNN
Jaques Reifman, Earl E. Feldman
1999 B conf
Signal Trend Identification with Fuzzy Methods.
ICTAI
Xin Wang, Thomas Y. C. Wei, Jaques Reifman, Lefteri H. Tsoukalas
1997 J jnl
Premature Saturation in Backpropagation Networks: Mechanism and Necessary Conditions.
Neural Networks
Javier E. Vitela, Jaques Reifman
1995 Misc conf
Systematic Construction of Qualitative Physics-Based Rules for Process Diagnostics.
EPIA
Jaques Reifman, Thomas Y. C. Wei