Janez Konc

32 papers Journal 31Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
Advanced clique algorithms for protein product graphs.
Art Discret. Appl. Math.
Janez Konc, Dusanka Janezic
2022 J jnl
Deep node ranking for neuro-symbolic structural node embedding and classification.
Int. J. Intell. Syst.
Blaz Skrlj, Jan Kralj, Janez Konc, Marko Robnik-Sikonja, Nada Lavrac
2022 J jnl
ProBiS-Dock: A Hybrid Multitemplate Homology Flexible Docking Algorithm Enabled by Protein Binding Site Comparison.
J. Chem. Inf. Model.
Janez Konc, Samo Lesnik, Blaz Skrlj, Matej Sova, Matic Proj, Damijan Knez, Stanislav Gobec, Dusanka Janezic
2022 J jnl
ProBiS-Fold Approach for Annotation of Human Structures from the AlphaFold Database with No Corresponding Structure in the PDB to Discover New Druggable Binding Sites.
J. Chem. Inf. Model.
Janez Konc, Dusanka Janezic
2021 J jnl
CaNDis: a web server for investigation of causal relationships between diseases, drugs and drug targets.
Bioinform.
Blaz Skrlj, Nika Erzen, Nada Lavrac, Tanja Kunej, Janez Konc
2021 J jnl
ProBiS-Dock Database: A Web Server and Interactive Web Repository of Small Ligand-Protein Binding Sites for Drug Design.
J. Chem. Inf. Model.
Janez Konc, Samo Lesnik, Blaz Skrlj, Dusanka Janezic
2020 J jnl
CANDOCK: Chemical Atomic Network-Based Hierarchical Flexible Docking Algorithm Using Generalized Statistical Potentials.
J. Chem. Inf. Model.
Jonathan Fine, Janez Konc, Ram Samudrala, Gaurav Chopra
2020 J jnl
Loop Grafting between Similar Local Environments for Fc-Silent Antibodies.
J. Chem. Inf. Model.
Samo Lesnik, Milan Hodoscek, Barbara Podobnik, Janez Konc
2019 J jnl
Deep Node Ranking: an Algorithm for Structural Network Embedding and End-to-End Classification.
CoRR
Blaz Skrlj, Jan Kralj, Janez Konc, Marko Robnik-Sikonja, Nada Lavrac
2019 J jnl
Discovery of Novel Potential Human Targets of Resveratrol by Inverse Molecular Docking.
J. Chem. Inf. Model.
Katarina Kores, Samo Lesnik, Urban Bren, Dusanka Janezic, Janez Konc
2017 J jnl
BoBER: web interface to the base of bioisosterically exchangeable replacements.
J. Cheminformatics
Samo Lesnik, Blaz Skrlj, Nika Erzen, Urban Bren, Stanislav Gobec, Janez Konc, Dusanka Janezic
2017 J jnl
GenProBiS: web server for mapping of sequence variants to protein binding sites.
Nucleic Acids Res.
Janez Konc, Blaz Skrlj, Nika Erzen, Tanja Kunej, Dusanka Janezic
2017 J jnl
Identification of Conserved Water Sites in Protein Structures for Drug Design.
J. Chem. Inf. Model.
Marko Jukic, Janez Konc, Stanislav Gobec, Dusanka Janezic
2016 J jnl
Ligand-based virtual screening interface between PyMOL and LiSiCA.
J. Cheminformatics
Athira Dilip, Samo Lesnik, Tanja Stular, Dusanka Janezic, Janez Konc
2015 J jnl
LiSiCA: A Software for Ligand-Based Virtual Screening and Its Application for the Discovery of Butyrylcholinesterase Inhibitors.
J. Chem. Inf. Model.
Samo Lesnik, Tanja Stular, Boris Brus, Damijan Knez, Stanislav Gobec, Dusanka Janezic, Janez Konc
2015 J jnl
Modeling enzyme-ligand binding in drug discovery.
J. Cheminformatics
Janez Konc, Samo Lesnik, Dusanka Janezic
2015 J jnl
Molecular dynamics to enhance structure-based virtual screening on cathepsin B.
J. Comput. Aided Mol. Des.
Mitja Ogrizek, Samo Turk, Samo Lesnik, Izidor Sosic, Milan Hodoscek, Bojana Mirkovic, Janko Kos, Dusanka Janezic, Stanislav Gobec, Janez Konc
2015 J jnl
ProBiS-CHARMMing: Web Interface for Prediction and Optimization of Ligands in Protein Binding Sites.
J. Chem. Inf. Model.
Janez Konc, Benjamin T. Miller, Tanja Stular, Samo Lesnik, H. Lee Woodcock III, Bernard R. Brooks, Dusanka Janezic
2014 J jnl
ProBiS-ligands: a web server for prediction of ligands by examination of protein binding sites.
Nucleic Acids Res.
Janez Konc, Dusanka Janezic
2013 J jnl
Exact Parallel Maximum Clique Algorithm for General and Protein Graphs.
J. Chem. Inf. Model.
Matjaz Depolli, Janez Konc, Kati Rozman, Roman Trobec, Dusanka Janezic
2013 J jnl
Structurally Conserved Binding Sites of Hemagglutinin as Targets for Influenza Drug and Vaccine Development.
J. Chem. Inf. Model.
Muhammad Yusuf, Janez Konc, Sy Bing Choi, Joanna Trykowska Konc, Nurul Bahiyah Ahmad Khairudin, Dusanka Janezic, Habibah A. Wahab
2013 J jnl
Structure-Based Function Prediction of Uncharacterized Protein Using Binding Sites Comparison.
PLoS Comput. Biol.
Janez Konc, Milan Hodoscek, Mitja Ogrizek, Joanna Trykowska Konc, Dusanka Janezic
2012 J jnl
Correlating Protein Hot Spot Surface Analysis Using ProBiS with Simulated Free Energies of Protein-Protein Interfacial Residues.
J. Chem. Inf. Model.
Nejc Carl, Milan Hodoscek, Blaz Vehar, Janez Konc, Bernard R. Brooks, Dusanka Janezic
2012 J jnl
Parallel-ProBiS: Fast parallel algorithm for local structural comparison of protein structures and binding sites.
J. Comput. Chem.
Janez Konc, Matjaz Depolli, Roman Trobec, Kati Rozman, Dusanka Janezic
2012 J jnl
ProBiS-2012: web server and web services for detection of structurally similar binding sites in proteins.
Nucleic Acids Res.
Janez Konc, Dusanka Janezic
2012 J jnl
ProBiS-Database: Precalculated Binding Site Similarities and Local Pairwise Alignments of PDB Structures.
J. Chem. Inf. Model.
Janez Konc, Tomo Cesnik, Joanna Trykowska Konc, Matej Penca, Dusanka Janezic
2010 J jnl
ProBiS algorithm for detection of structurally similar protein binding sites by local structural alignment.
Bioinform.
Janez Konc, Dusanka Janezic
2010 J jnl
ProBiS: a web server for detection of structurally similar protein binding sites.
Nucleic Acids Res.
Janez Konc, Dusanka Janezic
2010 J jnl
Protein-Protein Binding Site Prediction by Local Structural Alignment.
J. Chem. Inf. Model.
Nejc Carl, Janez Konc, Blaz Vehar, Dusanka Janezic
2008 J jnl
Protein Surface Conservation in Binding Sites.
J. Chem. Inf. Model.
Nejc Carl, Janez Konc, Dusanka Janezic
2007 — conf
A Branch and Bound Algorithm for Matching Protein Structures.
ICANNGA (2)
Janez Konc, Dusanka Janezic
2007 J jnl
Protein-Protein Binding-Sites Prediction by Protein Surface Structure Conservation.
J. Chem. Inf. Model.
Janez Konc, Dusanka Janezic