Jan Kok

12 papers Journal 10Unranked 2
YearRankTypeTitle / Venue / Authors
2022 J jnl
FUNAGE-Pro: comprehensive web server for gene set enrichment analysis of prokaryotes.
Nucleic Acids Res.
Anne de Jong, Oscar P. Kuipers, Jan Kok
2018 J jnl
BAGEL4: a user-friendly web server to thoroughly mine RiPPs and bacteriocins.
Nucleic Acids Res.
Auke J. van Heel, Anne de Jong, Chunxu Song, Jakob H. Viel, Jan Kok, Oscar P. Kuipers
2013 J jnl
BAGEL3: automated identification of genes encoding bacteriocins and (non-)bactericidal posttranslationally modified peptides.
Nucleic Acids Res.
Auke J. van Heel, Anne de Jong, Manuel Montalbán-López, Jan Kok, Oscar P. Kuipers
2011 — conf
Analysis of the BotNet Ecosystem.
CTTE
Jan Kok, Bernhard Kurz
2010 J jnl
BAGEL2: mining for bacteriocins in genomic data.
Nucleic Acids Res.
Anne de Jong, Auke J. van Heel, Jan Kok, Oscar P. Kuipers
2008 J jnl
Supervised Lowess normalization of comparative genome hybridization data - application to lactococcal strain comparisons.
BMC Bioinform.
Sacha A. F. T. van Hijum, Richard J. S. Baerends, Aldert L. Zomer, Harma A. Karsens, Victoria Martin-Requena, Oswaldo Trelles, Jan Kok, Oscar P. Kuipers
2006 J jnl
BAGEL: a web-based bacteriocin genome mining tool.
Nucleic Acids Res.
Anne de Jong, Sacha A. F. T. van Hijum, Jetta J. E. Bijlsma, Jan Kok, Oscar P. Kuipers
2006 J jnl
SIMAGE: simulation of DNA-microarray gene expression data.
BMC Bioinform.
Casper J. Albers, Ritsert C. Jansen, Jan Kok, Oscar P. Kuipers, Sacha A. F. T. van Hijum
2005 J jnl
Projector 2: contig mapping for efficient gap-closure of prokaryotic genome sequence assemblies.
Nucleic Acids Res.
Sacha A. F. T. van Hijum, Aldert L. Zomer, Oscar P. Kuipers, Jan Kok
2004 J jnl
Molecular Genetics Information System (MOLGENIS): alternatives in developing local experimental genomics databases.
Bioinform.
Morris A. Swertz, Engbert O. de Brock, Sacha A. F. T. van Hijum, Anne de Jong, Girbe Buist, Richard J. S. Baerends, Jan Kok, Oscar P. Kuipers, Ritsert C. Jansen
2003 J jnl
UniFrag and GenomePrimer: selection of primers for genome-wide production of unique amplicons.
Bioinform.
Sacha A. F. T. van Hijum, Anne de Jong, Girbe Buist, Jan Kok, Oscar P. Kuipers
2000 — conf
On choosing test criteria for behavioral level hardware design verification.
HLDVT
Anneliese von Mayrhauser, Tom Chen, Jan Kok, Chuck Anderson, Anita Read, Amjad Hajjar