Jan Ellenberg

17 papers A 1B 1Journal 6Unranked 9
YearRankTypeTitle / Venue / Authors
2023 J jnl
Simulating structurally variable nuclear pore complexes for microscopy.
Bioinform.
Maria Theiss, Jean-Karim Hériché, Craig Russell, David Helekal, Alisdair Soppitt, Jonas Ries, Jan Ellenberg, Alvis Brazma, Virginie Uhlmann
2018 J jnl
ChromoTrace: Computational reconstruction of 3D chromosome configurations for super-resolution microscopy.
PLoS Comput. Biol.
Carl Barton, Sandro Morganella, Øyvind Ødegård-Fougner, Stephanie Alexander, Jonas Ries, Tomas W. Fitzgerald, Jan Ellenberg, Ewan Birney
2018 J jnl
Experimental and computational framework for a dynamic protein atlas of human cell division.
Nat.
Yin Cai, M. Julius Hossain, Jean-Karim Hériché, Antonio Z. Politi, Nike Walther, Birgit Koch, Malte Wachsmuth, Bianca Nijmeijer, Moritz Kueblbeck, Marina Martinic-Kavur, Rene Ladurner, Stephanie Alexander, Jan-Michael Peters, Jan Ellenberg
2016 J jnl
The cellular microscopy phenotype ontology.
J. Biomed. Semant.
Simon Jupp, James Malone, Tony Burdett, Jean-Karim Hériché, Eleanor Williams, Jan Ellenberg, Helen E. Parkinson, Gabriella Rustici
2015 J jnl
FUN-L: gene prioritization for RNAi screens.
Bioinform.
Jonathan G. Lees, Jean-Karim Hériché, Ian Morilla, José María Fernández, Priit Adler, Martin Krallinger, Jaak Vilo, Alfonso Valencia, Jan Ellenberg, Juan A. G. Ranea, Christine A. Orengo
2013 J jnl
Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay.
BMC Bioinform.
Grégoire Pau, Thomas Walter, Beate Neumann, Jean-Karim Hériché, Jan Ellenberg, Wolfgang Huber
2010 — conf
Automatic Analysis of Live Cell Image Sequences to determine Temporal Mitotic Phenotypes.
Bildverarbeitung für die Medizin
Nathalie Harder, Felipe Mora-Bermúdez, William J. Godinez, Annelie Wünsche, Jan Ellenberg, Roland Eils, Karl Rohr
2008 — conf
A genome wide RNAI screen by time lapse microscopy in order to identify mitotic genes - computational aspects and challenges.
ISBI
Thomas Walter, Michael Held, Beate Neumann, Jean-Karim Hériché, Christian Conrad, Rainer Pepperkok, Jan Ellenberg
2007 B conf
Compensation of global movement for improved tracking of cells in time-lapse confocal microscopy image sequences.
Image Processing
Il-Han Kim, William J. Godinez, Nathalie Harder, Felipe Mora-Bermúdez, Jan Ellenberg, Roland Eils, Karl Rohr
2007 — conf
Determination of Mitotic Delays in 3D Fluorescence Microscopy Images of Human Cells Using an Error-Correcting Finite State Machine.
Bildverarbeitung für die Medizin
Nathalie Harder, Felipe Mora-Bermúdez, William J. Godinez, Jan Ellenberg, Roland Eils, Karl Rohr
2007 — conf
Determination of Mitotic Delays in 3d Fluorescence Microscopy Images of Human Cells Using an Error-Correcting Finite State Machine.
ISBI
Nathalie Harder, Felipe Mora-Bermúdez, William J. Godinez, Jan Ellenberg, Roland Eils, Karl Rohr
2006 — conf
Automated Analysis of Mitotic Phenotypes in Fluorescence Microscopy Images of Human Cells.
Bildverarbeitung für die Medizin
Nathalie Harder, Beate Neumann, Michael Held, Urban Liebel, Holger Erfle, Jan Ellenberg, Roland Eils, Karl Rohr
2006 — conf
Automated Analysis of the Mitotic Phases of Human Cells in 3D Fluorescence Microscopy Image Sequences.
MICCAI (1)
Nathalie Harder, Felipe Mora-Bermúdez, William J. Godinez, Jan Ellenberg, Roland Eils, Karl Rohr
2006 — conf
Automated recognition of mitotic patterns in fluorescence microscopy images of human cells.
ISBI
Nathalie Harder, Beate Neumann, Michael Held, Urban Liebel, Holger Erfle, Jan Ellenberg, Roland Eils, Karl Rohr
2006 — conf
Feature Selection for Evaluating Fluorescence Microscopy Images in Genome-Wide Cell Screens.
CVPR (1)
Vassili Kovalev, Nathalie Harder, Beate Neumann, Michael Held, Urban Liebel, Holger Erfle, Jan Ellenberg, Roland Eils, Karl Rohr
2006 — conf
Time-lapse microscopy-based genome wide RNAi screening in live human cells.
ISBI
Beate Neumann, Michael Held, Urban Liebel, Holger Erfle, Phil Rogers, Rainer Pepperkok, Jan Ellenberg
2001 A conf
New Tools for Visualization and Quantification in Dynamic Processes: Application to the Nuclear Envelope Dynamics During Mitosis.
MICCAI
Julian Mattes, Johannes Fieres, Joël Beaudouin, Daniel Gerlich, Jan Ellenberg, Roland Eils