Jan Deprest

98 papers A* 1A 4B 1Journal 62Unranked 30
YearRankTypeTitle / Venue / Authors
2024 J jnl
A Dempster-Shafer Approach to Trustworthy AI With Application to Fetal Brain MRI Segmentation.
IEEE Trans. Pattern Anal. Mach. Intell.
Lucas Fidon, Michael Aertsen, Florian Kofler, Andrea Bink, Anna L. David, Thomas Deprest, Doaa Emam, Frédéric Guffens, András Jakab, Gregor Kasprian, Patric Kienast, Andrew Melbourne, Bjoern H. Menze, Nada Mufti, Ivana Pogledic, Daniela Prayer, Marlene Stuempflen, Esther Van Elslander, Sébastien Ourselin, Jan Deprest, Tom Vercauteren
2024 J jnl
Autonomous Robotic Ultrasound Approach for Fetoscope Tracking by Fusing Optical and 2D Ultrasound Data.
IEEE Robotics Autom. Lett.
Yuyu Cai, Ruixuan Li, Ayoob Davoodi, Mouloud Ourak, Jan Deprest, Emmanuel B. Vander Poorten
2024 J jnl
Correction to: Robust fetoscopic mosaicking from deep learned flow fields.
Int. J. Comput. Assist. Radiol. Surg.
Oluwatosin Alabi, Sophia Bano, Francisco Vasconcelos, Anna L. David, Jan Deprest, Danail Stoyanov
2024 J jnl
Learning-based keypoint registration for fetoscopic mosaicking.
Int. J. Comput. Assist. Radiol. Surg.
Alessandro Casella, Sophia Bano, Francisco Vasconcelos, Anna L. David, Dario Paladini, Jan Deprest, Elena De Momi, Leonardo S. Mattos, Sara Moccia, Danail Stoyanov
2024 J jnl
Placental vessel segmentation and registration in fetoscopy: Literature review and MICCAI FetReg2021 challenge findings.
Medical Image Anal.
Sophia Bano, Alessandro Casella, Francisco Vasconcelos, Abdul Qayyum, Abdesslam Benzinou, Moona Mazher, Fabrice Mériaudeau, Chiara Lena, Ilaria Anita Cintorrino, Gaia Romana De Paolis, Jessica Biagioli, Daria Grechishnikova, Jing Jiao, Bizhe Bai, Yanyan Qiao, Binod Bhattarai, Rebati Raman Gaire, Ronast Subedi, Eduard Vazquez, Szymon Plotka, Aneta Lisowska, Arkadiusz Sitek, George Attilakos, Ruwan Wimalasundera, Anna L. David, Dario Paladini, Jan Deprest, Elena De Momi, Leonardo S. Mattos, Sara Moccia, Danail Stoyanov
2024 — conf
Towards Automated Multi-regional Lung Parcellation for 0.55-3T 3D T2w Fetal MRI.
PIPPI@MICCAI
Alena Uus, Carla Avena Zampieri, Fenella Downes, Alexia Egloff Collado, Megan Hall, Joseph Davidson, Kelly Payette, Jordina Aviles Verdera, Irina Grigorescu, Joseph V. Hajnal, Maria Deprez, Michael Aertsen, Jana Hutter, Mary A. Rutherford, Jan Deprest, Lisa Story
2024 — conf
UltraAugment: Fan-shape and Artifact-based Data Augmentation for 2D Ultrasound Images.
CVPR Workshops
Florian Ramakers, Tom Vercauteren, Jan Deprest, Helena Williams
2023 — conf
Adaptive Multi-scale Online Likelihood Network for AI-Assisted Interactive Segmentation.
MICCAI (2)
Muhammad Asad, Helena Williams, Indrajeet Mandal, Sarim Ather, Jan Deprest, Jan D'hooge, Tom Vercauteren
2023 J jnl
Adaptive Multi-scale Online Likelihood Network for AI-assisted Interactive Segmentation.
CoRR
Muhammad Asad, Helena Williams, Indrajeet Mandal, Sarim Ather, Jan Deprest, Jan D'hooge, Tom Vercauteren
2023 J jnl
Comparison of 2D and autostereoscopic 3D visualization during mixed reality simulation.
Int. J. Comput. Assist. Radiol. Surg.
Viktor Vörös, Jef De Smet, Mouloud Ourak, Vladimir Poliakov, Jan Deprest, Tom Kimpe, Emmanuel B. Vander Poorten
2023 J jnl
DEEPBEAS3D: Deep Learning and B-Spline Explicit Active Surfaces.
CoRR
Helena Williams, João Pedrosa, Muhammad Asad, Laura Cattani, Tom Vercauteren, Jan Deprest, Jan D'hooge
2023 J jnl
Development and validation of a flexible fetoscope for fetoscopic laser coagulation.
Int. J. Comput. Assist. Radiol. Surg.
Mirza Awais Ahmad, Mouloud Ourak, Dirk Wenmakers, Ignacio Valenzuela, David Basurto, Sébastien Ourselin, Tom Vercauteren, Jan Deprest, Emmanuel B. Vander Poorten
2023 — conf
Development of Robot-assisted Ultrasound System for Fetoscopic Tracking in Twin to Twin Transfusion Syndrome Surgery.
ISMR
Yuyu Cai, Ayoob Davoodi, Ruixuan Li, Mouloud Ourak, Kenan Niu, Jan Deprest, Emmanuel B. Vander Poorten
2023 J jnl
Motion and viewing analysis during minimally invasive surgery for autostereoscopic visualization.
Int. J. Comput. Assist. Radiol. Surg.
Viktor Vörös, Ann-Sophie Page, Jan Deprest, Tom Kimpe, Emmanuel B. Vander Poorten
2023 J jnl
Placental vessel-guided hybrid framework for fetoscopic mosaicking.
Comput. methods Biomech. Biomed. Eng. Imaging Vis.
Sophia Bano, Francisco Vasconcelos, Anna L. David, Jan Deprest, Danail Stoyanov
2023 — conf
Towards in-utero Navigational Assistance: A Multi Task Neural Network for Segmentation and Pose Estimation in Fetoscopy.
ISMR
Mirza Awais Ahmad, Mouloud Ourak, Tom Vercauteren, Jan Deprest, Emmanuel B. Vander Poorten
2022 J jnl
A Dempster-Shafer approach to trustworthy AI with application to fetal brain MRI segmentation.
CoRR
Lucas Fidon, Michael Aertsen, Florian Kofler, Andrea Bink, Anna L. David, Thomas Deprest, Doaa Emam, Frédéric Guffens, András Jakab, Gregor Kasprian, Patric Kienast, Andrew Melbourne, Bjoern H. Menze, Nada Mufti, Ivana Pogledic, Daniela Prayer, Marlene Stuempflen, Esther Van Elslander, Sébastien Ourselin, Jan Deprest, Tom Vercauteren
2022 J jnl
Concentric Dual-Chamber Pneumatic Artificial Muscles: Miniature Actuators Designed for Use in Minimally Invasive Surgical Instruments.
J. Medical Robotics Res.
Robert Lathrop, Mouloud Ourak, Jan Deprest, Emmanuel B. Vander Poorten
2022 J jnl
FetReg2021: A Challenge on Placental Vessel Segmentation and Registration in Fetoscopy.
CoRR
Sophia Bano, Alessandro Casella, Francisco Vasconcelos, Abdul Qayyum, Abdesslam Benzinou, Moona Mazher, Fabrice Mériaudeau, Chiara Lena, Ilaria Anita Cintorrino, Gaia Romana De Paolis, Jessica Biagioli, Daria Grechishnikova, Jing Jiao, Bizhe Bai, Yanyan Qiao, Binod Bhattarai, Rebati Raman Gaire, Ronast Subedi, Eduard Vazquez, Szymon Plotka, Aneta Lisowska, Arkadiusz Sitek, George Attilakos, Ruwan Wimalasundera, Anna L. David, Dario Paladini, Jan Deprest, Elena De Momi, Leonardo S. Mattos, Sara Moccia, Danail Stoyanov
2022 J jnl
Large-scale surgical workflow segmentation for laparoscopic sacrocolpopexy.
Int. J. Comput. Assist. Radiol. Surg.
Yitong Zhang, Sophia Bano, Ann-Sophie Page, Jan Deprest, Danail Stoyanov, Francisco Vasconcelos
2022 J jnl
Learning-Based Keypoint Registration for Fetoscopic Mosaicking.
CoRR
Alessandro Casella, Sophia Bano, Francisco Vasconcelos, Anna L. David, Dario Paladini, Jan Deprest, Elena De Momi, Leonardo S. Mattos, Sara Moccia, Danail Stoyanov
2022 — conf
Retrieval of Surgical Phase Transitions Using Reinforcement Learning.
MICCAI (8)
Yitong Zhang, Sophia Bano, Ann-Sophie Page, Jan Deprest, Danail Stoyanov, Francisco Vasconcelos
2022 J jnl
Retrieval of surgical phase transitions using reinforcement learning.
CoRR
Yitong Zhang, Sophia Bano, Ann-Sophie Page, Jan Deprest, Danail Stoyanov, Francisco Vasconcelos
2022 J jnl
Robotic Endoscope Control Via Autonomous Instrument Tracking.
Frontiers Robotics AI
Caspar Gruijthuijsen, Luis C. García-Peraza-Herrera, Gianni Borghesan, Dominiek Reynaerts, Jan Deprest, Sébastien Ourselin, Tom Vercauteren, Emmanuel B. Vander Poorten
2022 J jnl
Robust fetoscopic mosaicking from deep learned flow fields.
Int. J. Comput. Assist. Radiol. Surg.
Oluwatosin Alabi, Sophia Bano, Francisco Vasconcelos, Anna L. David, Jan Deprest, Danail Stoyanov
2021 — conf
Automatic Tomographic Ultrasound Imaging Sequence Extraction of the Anal Sphincter.
ASMUS@MICCAI
Helena Williams, Laura Cattani, Tom Vercauteren, Jan Deprest, Jan D'hooge
2021 J jnl
Autonomous Robotic Endoscope Control based on Semantically Rich Instructions.
CoRR
Caspar Gruijthuijsen, Luis C. García-Peraza-Herrera, Gianni Borghesan, Dominiek Reynaerts, Jan Deprest, Sébastien Ourselin, Tom Vercauteren, Emmanuel B. Vander Poorten
2021 J jnl
CA-Net: Comprehensive Attention Convolutional Neural Networks for Explainable Medical Image Segmentation.
IEEE Trans. Medical Imaging
Ran Gu, Guotai Wang, Tao Song, Rui Huang, Michael Aertsen, Jan Deprest, Sébastien Ourselin, Tom Vercauteren, Shaoting Zhang
2021 — conf
Design and Characterization of a Miniature Dual-chamber Pneumatic Actuator for Minimally Invasive Surgical Devices.
ISMR
Robert Lathrop, Mouloud Ourak, Francesca Russo, Jan Deprest, Emmanuel B. Vander Poorten
2021 — conf
Distributionally Robust Segmentation of Abnormal Fetal Brain 3D MRI.
UNSURE/PIPPI@MICCAI
Lucas Fidon, Michael Aertsen, Nada Mufti, Thomas Deprest, Doaa Emam, Frédéric Guffens, Ernst Schwartz, Michael Ebner, Daniela Prayer, Gregor Kasprian, Anna L. David, Andrew Melbourne, Sébastien Ourselin, Jan Deprest, Georg Langs, Tom Vercauteren
2021 J jnl
Distributionally Robust Segmentation of Abnormal Fetal Brain 3D MRI.
CoRR
Lucas Fidon, Michael Aertsen, Nada Mufti, Thomas Deprest, Doaa Emam, Frédéric Guffens, Ernst Schwartz, Michael Ebner, Daniela Prayer, Gregor Kasprian, Anna L. David, Andrew Melbourne, Sébastien Ourselin, Jan Deprest, Georg Langs, Tom Vercauteren
2021 J jnl
FetReg: Placental Vessel Segmentation and Registration in Fetoscopy Challenge Dataset.
CoRR
Sophia Bano, Alessandro Casella, Francisco Vasconcelos, Sara Moccia, George Attilakos, Ruwan Wimalasundera, Anna L. David, Dario Paladini, Jan Deprest, Elena De Momi, Leonardo S. Mattos, Danail Stoyanov
2021 J jnl
Globally Optimal Fetoscopic Mosaicking Based on Pose Graph Optimisation With Affine Constraints.
IEEE Robotics Autom. Lett.
Liang Li, Sophia Bano, Jan Deprest, Anna L. David, Danail Stoyanov, Francisco Vasconcelos
2021 — conf
Interactive Segmentation via Deep Learning and B-Spline Explicit Active Surfaces.
MICCAI (1)
Helena Williams, João Pedrosa, Laura Cattani, Susanne Housmans, Tom Vercauteren, Jan Deprest, Jan D'hooge
2021 J jnl
Interactive Segmentation via Deep Learning and B-Spline Explicit Active Surfaces.
CoRR
Helena Williams, João Pedrosa, Laura Cattani, Susanne Housmans, Tom Vercauteren, Jan Deprest, Jan D'hooge
2021 — conf
Label-Set Loss Functions for Partial Supervision: Application to Fetal Brain 3D MRI Parcellation.
MICCAI (2)
Lucas Fidon, Michael Aertsen, Doaa Emam, Nada Mufti, Frédéric Guffens, Thomas Deprest, Philippe Demaerel, Anna L. David, Andrew Melbourne, Sébastien Ourselin, Jan Deprest, Tom Vercauteren
2021 J jnl
Label-set Loss Functions for Partial Supervision: Application to Fetal Brain 3D MRI Parcellation.
CoRR
Lucas Fidon, Michael Aertsen, Doaa Emam, Nada Mufti, Frédéric Guffens, Thomas Deprest, Philippe Demaerel, Anna L. David, Andrew Melbourne, Sébastien Ourselin, Jan Deprest, Tom Vercauteren
2021 J jnl
MIDeepSeg: Minimally Interactive Segmentation of Unseen Objects from Medical Images Using Deep Learning.
CoRR
Xiangde Luo, Guotai Wang, Tao Song, Jingyang Zhang, Michael Aertsen, Jan Deprest, Sébastien Ourselin, Tom Vercauteren, Shaoting Zhang
2021 J jnl
MIDeepSeg: Minimally interactive segmentation of unseen objects from medical images using deep learning.
Medical Image Anal.
Xiangde Luo, Guotai Wang, Tao Song, Jingyang Zhang, Michael Aertsen, Jan Deprest, Sébastien Ourselin, Tom Vercauteren, Shaoting Zhang
2021 J jnl
Partial supervision for the FeTA challenge 2021.
CoRR
Lucas Fidon, Michael Aertsen, Suprosanna Shit, Philippe Demaerel, Sébastien Ourselin, Jan Deprest, Tom Vercauteren
2020 J jnl
Active Annotation of Informative Overlapping Frames in Video Mosaicking Applications.
CoRR
Loïc Peter, Marcel Tella-Amo, Dzhoshkun Ismail Shakir, Jan Deprest, Sébastien Ourselin, Juan Eugenio Iglesias, Tom Vercauteren
2020 — conf
Active Handheld Flexible Fetoscope-Design and Control Based on a Modified Generalized Prandtl-Ishlinski Model.
AIM
Julie Legrand, Dries Dirckx, Maarten Durt, Mouloud Ourak, Jan Deprest, Sébastien Ourselin, Jun Qian, Tom Vercauteren, Emmanuel B. Vander Poorten
2020 J jnl
An automated framework for localization, segmentation and super-resolution reconstruction of fetal brain MRI.
NeuroImage
Michael Ebner, Guotai Wang, Wenqi Li, Michael Aertsen, Premal A. Patel, Rosalind Aughwane, Andrew Melbourne, Tom Doel, Steven Dymarkowski, Paolo De Coppi, Anna L. David, Jan Deprest, Sébastien Ourselin, Tom Vercauteren
2020 — conf
Automatic C-Plane Detection in Pelvic Floor Transperineal Volumetric Ultrasound.
ASMUS/PIPPI@MICCAI
Helena Williams, Laura Cattani, Mohammad Yaqub, Carole H. Sudre, Tom Vercauteren, Jan Deprest, Jan D'hooge
2020 J jnl
CA-Net: Comprehensive Attention Convolutional Neural Networks for Explainable Medical Image Segmentation.
CoRR
Ran Gu, Guotai Wang, Tao Song, Rui Huang, Michael Aertsen, Jan Deprest, Sébastien Ourselin, Tom Vercauteren, Shaoting Zhang
2020 — conf
Deep Placental Vessel Segmentation for Fetoscopic Mosaicking.
MICCAI (3)
Sophia Bano, Francisco Vasconcelos, Luke M. Shepherd, Emmanuel B. Vander Poorten, Tom Vercauteren, Sébastien Ourselin, Anna L. David, Jan Deprest, Danail Stoyanov
2020 J jnl
Deep Placental Vessel Segmentation for Fetoscopic Mosaicking.
CoRR
Sophia Bano, Francisco Vasconcelos, Luke M. Shepherd, Emmanuel B. Vander Poorten, Tom Vercauteren, Sébastien Ourselin, Anna L. David, Jan Deprest, Danail Stoyanov
2020 J jnl
Deep learning-based fetoscopic mosaicking for field-of-view expansion.
Int. J. Comput. Assist. Radiol. Surg.
Sophia Bano, Francisco Vasconcelos, Marcel Tella-Amo, George Dwyer, Caspar Gruijthuijsen, Emmanuel B. Vander Poorten, Tom Vercauteren, Sébastien Ourselin, Jan Deprest, Danail Stoyanov
2020 J jnl
Deep learning-based monocular placental pose estimation: towards collaborative robotics in fetoscopy.
Int. J. Comput. Assist. Radiol. Surg.
Mirza Awais Ahmad, Mouloud Ourak, Caspar Gruijthuijsen, Jan Deprest, Tom Vercauteren, Emmanuel B. Vander Poorten
2020 J jnl
FetNet: a recurrent convolutional network for occlusion identification in fetoscopic videos.
Int. J. Comput. Assist. Radiol. Surg.
Sophia Bano, Francisco Vasconcelos, Emmanuel B. Vander Poorten, Tom Vercauteren, Sébastien Ourselin, Jan Deprest, Danail Stoyanov
2020 J jnl
Real-Time Segmentation of Non-Rigid Surgical Tools based on Deep Learning and Tracking.
CoRR
Luis C. García-Peraza-Herrera, Wenqi Li, Caspar Gruijthuijsen, Alain Devreker, George Attilakos, Jan Deprest, Emmanuel B. Vander Poorten, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin
2020 — conf
Uncertainty-Guided Efficient Interactive Refinement of Fetal Brain Segmentation from Stacks of MRI Slices.
MICCAI (4)
Guotai Wang, Michael Aertsen, Jan Deprest, Sébastien Ourselin, Tom Vercauteren, Shaoting Zhang
2020 J jnl
Uncertainty-Guided Efficient Interactive Refinement of Fetal Brain Segmentation from Stacks of MRI Slices.
CoRR
Guotai Wang, Michael Aertsen, Jan Deprest, Sébastien Ourselin, Tom Vercauteren, Shaoting Zhang
2019 J jnl
Aleatoric uncertainty estimation with test-time augmentation for medical image segmentation with convolutional neural networks.
Neurocomputing
Guotai Wang, Wenqi Li, Michael Aertsen, Jan Deprest, Sébastien Ourselin, Tom Vercauteren
2019 — conf
Deep Sequential Mosaicking of Fetoscopic Videos.
MICCAI (1)
Sophia Bano, Francisco Vasconcelos, Marcel Tella-Amo, George Dwyer, Caspar Gruijthuijsen, Jan Deprest, Sébastien Ourselin, Emmanuel B. Vander Poorten, Tom Vercauteren, Danail Stoyanov
2019 J jnl
Deep Sequential Mosaicking of Fetoscopic Videos.
CoRR
Sophia Bano, Francisco Vasconcelos, Marcel Tella-Amo, George Dwyer, Caspar Gruijthuijsen, Jan Deprest, Sébastien Ourselin, Emmanuel B. Vander Poorten, Tom Vercauteren, Danail Stoyanov
2019 J jnl
DeepIGeoS: A Deep Interactive Geodesic Framework for Medical Image Segmentation.
IEEE Trans. Pattern Anal. Mach. Intell.
Guotai Wang, Maria A. Zuluaga, Wenqi Li, Rosalind Pratt, Premal A. Patel, Michael Aertsen, Tom Doel, Anna L. David, Jan Deprest, Sébastien Ourselin, Tom Vercauteren
2019 — conf
Design and Shared Control of a Flexible Endoscope with Autonomous Distal Tip Alignment.
ICAR
Mirza Awais Ahmad, Mouloud Ourak, Caspar Gruijthuijsen, Julie Legrand, Tom Vercauteren, Jan Deprest, Sébastien Ourselin, Emmanuel B. Vander Poorten
2019 — conf
Evaluating the Potential Benefit of Autostereoscopy in Laparoscopic Sacrocolpopexy through VR Simulation.
ICAR
Jef De Smet, Emmanuel B. Vander Poorten, Vladimir Poliakov, Kenan Niu, Frédérique Chesterman, Johan Fornier, Mirza Awais Ahmad, Mouloud Ourak, Viktor Vörös, Jan Deprest
2019 J jnl
Evaluation of Haptic Feedback on Bimanually Teleoperated Laparoscopy for Endometriosis Surgery.
IEEE Trans. Biomed. Eng.
Sergio Portolés Diez, Gianni Borghesan, Luc Joyeux, Christel Meuleman, Jan Deprest, Danail Stoyanov, Sébastien Ourselin, Tom Vercauteren, Dominiek Reynaerts, Emmanuel B. Vander Poorten
2019 J jnl
Handheld Active Add-On Control Unit for a Cable-Driven Flexible Endoscope.
Frontiers Robotics AI
Julie Legrand, Allan Javaux, Mouloud Ourak, Dirk Wenmakers, Tom Vercauteren, Jan Deprest, Sébastien Ourselin, Kathleen Denis, Emmanuel B. Vander Poorten
2019 J jnl
In Vivo Force Sensing During Laparoscopic Sacrocolpopexy Vaginal Vault Manipulation.
J. Medical Robotics Res.
Jef De Smet, Jan Deprest, Emmanuel B. Vander Poorten
2019 A conf
Macro-Micro Multi-Arm Robot for Single-Port Access Surgery.
IROS
T. Vandebroek, Mouloud Ourak, Caspar Gruijthuijsen, Allan Javaux, Julie Legrand, Tom Vercauteren, Sébastien Ourselin, Jan Deprest, Emmanuel B. Vander Poorten
2019 A* conf
Robotic Control of a Multi-Modal Rigid Endoscope Combining Optical Imaging with All-Optical Ultrasound.
ICRA
George Dwyer, Richard J. Colchester, Erwin J. Alles, Efthymios Maneas, Sébastien Ourselin, Tom Vercauteren, Jan Deprest, Emmanuel B. Vander Poorten, Paolo De Coppi, Adrien E. Desjardins, Danail Stoyanov
2018 J jnl
A Log-Euclidean and Total Variation based Variational Framework for Computational Sonography.
CoRR
Jyotirmoy Banerjee, Premal A. Patel, Fred Ushakov, Donald Peebles, Jan Deprest, Sébastien Ourselin, David J. Hawkes, Tom Vercauteren
2018 B conf
A log-Euclidean and total variation based variational framework for computational sonography.
Image Processing
Jyotirmoy Banerjee, Premal A. Patel, Fred Ushakov, Donald Peebles, Jan Deprest, Sébastien Ourselin, David J. Hawkes, Tom Vercauteren
2018 J jnl
A magnetic resonance multi-atlas for the neonatal rabbit brain.
NeuroImage
Sebastiano Ferraris, Johannes L. van der Merwe, Lennart Van Der Veeken, Ferran Prados, Juan Eugenio Iglesias, Andrew Melbourne, Marco Lorenzi, Marc Modat, Willy Gsell, Jan Deprest, Tom Vercauteren
2018 J jnl
A mixed-reality surgical trainer with comprehensive sensing for fetal laser minimally invasive surgery.
Int. J. Comput. Assist. Radiol. Surg.
Allan Javaux, David Bouget, Caspar Gruijthuijsen, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin, Jan Deprest, Kathleen Denis, Emmanuel B. Vander Poorten
2018 J jnl
Aleatoric uncertainty estimation with test-time augmentation for medical image segmentation with convolutional neural networks.
CoRR
Guotai Wang, Wenqi Li, Michael Aertsen, Jan Deprest, Sébastien Ourselin, Tom Vercauteren
2018 — conf
An Automated Localization, Segmentation and Reconstruction Framework for Fetal Brain MRI.
MICCAI (1)
Michael Ebner, Guotai Wang, Wenqi Li, Michael Aertsen, Premal A. Patel, Rosalind Aughwane, Andrew Melbourne, Tom Doel, Anna L. David, Jan Deprest, Sébastien Ourselin, Tom Vercauteren
2018 J jnl
From a Disposable Ureteroscope to an Active Lightweight Fetoscope - Characterization and Usability Evaluation.
IEEE Robotics Autom. Lett.
Julie Legrand, Mouloud Ourak, Allan Javaux, Caspar Gruijthuijsen, Mirza Awais Ahmad, Ben Van Cleynenbreugel, Tom Vercauteren, Jan Deprest, Sébastien Ourselin, Emmanuel B. Vander Poorten
2018 J jnl
Haptic Guidance Based on All-Optical Ultrasound Distance Sensing for Safer Minimally Invasive Fetal Surgery.
J. Medical Robotics Res.
Caspar Gruijthuijsen, Richard J. Colchester, Alain Devreker, Allan Javaux, Efthymios Maneas, Sacha Noimark, Wenfeng Xia, Danail Stoyanov, Dominiek Reynaerts, Jan Deprest, Sébastien Ourselin, Adrien E. Desjardins, Tom Vercauteren, Emmanuel B. Vander Poorten
2018 J jnl
Interactive Medical Image Segmentation Using Deep Learning With Image-Specific Fine Tuning.
IEEE Trans. Medical Imaging
Guotai Wang, Wenqi Li, Maria A. Zuluaga, Rosalind Pratt, Premal A. Patel, Michael Aertsen, Tom Doel, Anna L. David, Jan Deprest, Sébastien Ourselin, Tom Vercauteren
2018 — conf
MRI Measurement of Placental Perfusion and Fetal Blood Oxygen Saturation in Normal Pregnancy and Placental Insufficiency.
MICCAI (2)
Rosalind Aughwane, Magdalena J. Sokolska, Alan Bainbridge, David Atkinson, Giles S. Kendall, Jan Deprest, Tom Vercauteren, Anna L. David, Sébastien Ourselin, Andrew Melbourne
2018 J jnl
Retrieval and Registration of Long-Range Overlapping Frames for Scalable Mosaicking of In Vivo Fetoscopy.
CoRR
Loïc Peter, Marcel Tella-Amo, Dzhoshkun Ismail Shakir, George Attilakos, Ruwan Wimalasundera, Jan Deprest, Sébastien Ourselin, Tom Vercauteren
2018 J jnl
Retrieval and registration of long-range overlapping frames for scalable mosaicking of in vivo fetoscopy.
Int. J. Comput. Assist. Radiol. Surg.
Loïc Peter, Marcel Tella-Amo, Dzhoshkun Ismail Shakir, George Attilakos, Ruwan Wimalasundera, Jan Deprest, Sébastien Ourselin, Tom Vercauteren
2018 — conf
Technical note: automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalising neural network.
Image-Guided Procedures
Ester Bonmati, Yipeng Hu, Nikhil Sindhwani, Hans Peter Dietz, Jan D'hooge, Dean C. Barratt, Jan Deprest, Tom Vercauteren
2018 — conf
Technical note: probabilistic visual and electromagnetic data fusion for robust drift-free sequential mosaicking. Application to fetoscopy.
Image-Guided Procedures
Marcel Tella-Amo, Loïc Peter, Dzhoshkun I. Shakir, Jan Deprest, Danail Stoyanov, Juan Eugenio Iglesias, Tom Vercauteren, Sébastien Ourselin
2018 J jnl
Towards computer-assisted TTTS: Laser ablation detection for workflow segmentation from fetoscopic video.
Int. J. Comput. Assist. Radiol. Surg.
Francisco Vasconcelos, Patrick Brandao, Tom Vercauteren, Sébastien Ourselin, Jan Deprest, Donald Peebles, Danail Stoyanov
2017 J jnl
A Continuum Robot and Control Interface for Surgical Assist in Fetoscopic Interventions.
IEEE Robotics Autom. Lett.
George Dwyer, François Chadebecq, Marcel Tella-Amo, Christos Bergeles, Efthymios Maneas, Vijay Pawar, Emmanuel B. Vander Poorten, Jan Deprest, Sébastien Ourselin, Paolo De Coppi, Tom Vercauteren, Danail Stoyanov
2017 J jnl
Automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalising neural network.
CoRR
Ester Bonmati, Yipeng Hu, Nikhil Sindhwani, Hans Peter Dietz, Jan D'hooge, Dean C. Barratt, Jan Deprest, Tom Vercauteren
2017 A conf
Body wall force sensor for simulated minimally invasive surgery: Application to fetal surgery.
IROS
Allan Javaux, Laure Esteveny, David Bouget, Caspar Gruijthuijsen, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin, Dominiek Reynaerts, Kathleen Denis, Jan Deprest, Emmanuel B. Vander Poorten
2017 J jnl
Bruker2nifti: Magnetic Resonance Images converter from Bruker ParaVision to Nifti format.
J. Open Source Softw.
Sebastiano Ferraris, Dzhoshkun Ismail Shakir, Johannes L. van der Merwe, Willy Gsell, Jan Deprest, Tom Vercauteren
2017 J jnl
DeepIGeoS: A Deep Interactive Geodesic Framework for Medical Image Segmentation.
CoRR
Guotai Wang, Maria A. Zuluaga, Wenqi Li, Rosalind Pratt, Premal A. Patel, Michael Aertsen, Tom Doel, Anna L. David, Jan Deprest, Sébastien Ourselin, Tom Vercauteren
2017 J jnl
GIFT-Cloud: A data sharing and collaboration platform for medical imaging research.
Comput. Methods Programs Biomed.
Tom Doel, Dzhoshkun I. Shakir, Rosalind Pratt, Michael Aertsen, James Moggridge, Erwin Bellon, Anna L. David, Jan Deprest, Tom Vercauteren, Sébastien Ourselin
2017 J jnl
Interactive Medical Image Segmentation using Deep Learning with Image-specific Fine-tuning.
CoRR
Guotai Wang, Wenqi Li, Maria A. Zuluaga, Rosalind Pratt, Premal A. Patel, Michael Aertsen, Tom Doel, Anna L. David, Jan Deprest, Sébastien Ourselin, Tom Vercauteren
2017 — conf
Template-Free Estimation of Intracranial Volume: A Preterm Birth Animal Model Study.
FIFI/OMIA@MICCAI
Juan Eugenio Iglesias, Sebastiano Ferraris, Marc Modat, Willy Gsell, Jan Deprest, Johannes L. van der Merwe, Tom Vercauteren
2017 J jnl
ToolNet: Holistically-Nested Real-Time Segmentation of Robotic Surgical Tools.
CoRR
Luis C. García-Peraza-Herrera, Wenqi Li, Lucas Fidon, Caspar Gruijthuijsen, Alain Devreker, George Attilakos, Jan Deprest, Emmanuel B. Vander Poorten, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin
2017 A conf
ToolNet: Holistically-nested real-time segmentation of robotic surgical tools.
IROS
Luis C. García-Peraza-Herrera, Wenqi Li, Lucas Fidon, Caspar Gruijthuijsen, Alain Devreker, George Attilakos, Jan Deprest, Emmanuel B. Vander Poorten, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin
2016 — conf
A Combined EM and Visual Tracking Probabilistic Model for Robust Mosaicking: Application to Fetoscopy.
CVPR Workshops
Marcel Tella-Amo, Pankaj Daga, François Chadebecq, Stephen A. Thompson, Dzhoshkun I. Shakir, George Dwyer, Ruwan Wimalasundera, Jan Deprest, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin
2016 — conf
Dynamically Balanced Online Random Forests for Interactive Scribble-Based Segmentation.
MICCAI (2)
Guotai Wang, Maria A. Zuluaga, Rosalind Pratt, Michael Aertsen, Tom Doel, Maria Klusmann, Anna L. David, Jan Deprest, Tom Vercauteren, Sébastien Ourselin
2016 — conf
Real-Time Segmentation of Non-rigid Surgical Tools Based on Deep Learning and Tracking.
CARE@MICCAI
Luis C. García-Peraza-Herrera, Wenqi Li, Caspar Gruijthuijsen, Alain Devreker, George Attilakos, Jan Deprest, Emmanuel B. Vander Poorten, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin
2016 — conf
Real-time mosaicing of fetoscopic videos using SIFT.
Image-Guided Procedures
Pankaj Daga, François Chadebecq, Dzhoshkun I. Shakir, Luis Carlos García-Peraza-Herrera, Marcel Tella, George Dwyer, Anna L. David, Jan Deprest, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin
2016 J jnl
Slic-Seg: A minimally interactive segmentation of the placenta from sparse and motion-corrupted fetal MRI in multiple views.
Medical Image Anal.
Guotai Wang, Maria A. Zuluaga, Rosalind Pratt, Michael Aertsen, Tom Doel, Maria Klusmann, Anna L. David, Jan Deprest, Tom Vercauteren, Sébastien Ourselin
2015 — conf
A Registration Approach to Endoscopic Laser Speckle Contrast Imaging for Intrauterine Visualisation of Placental Vessels.
MICCAI (1)
Gustavo Sato dos Santos, Efthymios Maneas, Daniil I. Nikitichev, Anamaria Barburas, Anna L. David, Jan Deprest, Adrien E. Desjardins, Tom Vercauteren, Sébastien Ourselin
2015 A conf
Fluidic actuation for intra-operative in situ imaging.
IROS
Alain Devreker, Benoit Rosa, Adrien E. Desjardins, Erwin J. Alles, Luis C. García-Peraza, Efthymios Maneas, Danail Stoyanov, Anna L. David, Tom Vercauteren, Jan Deprest, Sébastien Ourselin, Dominiek Reynaerts, Emmanuel B. Vander Poorten
2015 — conf
Interventional Photoacoustic Imaging of the Human Placenta with Ultrasonic Tracking for Minimally Invasive Fetal Surgeries.
MICCAI (1)
Wenfeng Xia, Efthymios Maneas, Daniil I. Nikitichev, Charles A. Mosse, Gustavo Sato dos Santos, Tom Vercauteren, Anna L. David, Jan Deprest, Sébastien Ourselin, Paul C. Beard, Adrien E. Desjardins
2015 — conf
Slic-Seg: Slice-by-Slice Segmentation Propagation of the Placenta in Fetal MRI Using One-Plane Scribbles and Online Learning.
MICCAI (3)
Guotai Wang, Maria A. Zuluaga, Rosalind Pratt, Michael Aertsen, Anna L. David, Jan Deprest, Tom Vercauteren, Sébastien Ourselin