Jan Christian Kässens

13 papers C 1Misc 3Journal 4Unranked 4
YearRankTypeTitle / Venue / Authors
2020 — conf
Reference-Based Haplotype Phasing with FPGAs.
ICCS (3)
Lars Wienbrandt, Jan Christian Kässens, David Ellinghaus
2019 J jnl
1000× faster than PLINK: Combined FPGA and GPU accelerators for logistic regression-based detection of epistasis.
J. Comput. Sci.
Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, David Ellinghaus
2018 — conf
1, 000x Faster Than PLINK: Genome-Wide Epistasis Detection with Logistic Regression Using Combined FPGA and GPU Accelerators.
ICCS (2)
Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, David Ellinghaus
2017 — —
A Hybrid-parallel Architecture for Applications in Bioinformatics.
Jan Christian Kässens
2017 Misc conf
Fast Genome-Wide Third-order SNP Interaction Tests with Information Gain on a Low-cost Heterogeneous Parallel FPGA-GPU Computing Architecture.
ICCS
Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, David Ellinghaus
2016 — conf
Combining GPU and FPGA technology for efficient exhaustive interaction analysis in GWAS.
ASAP
Jan Christian Kässens, Lars Wienbrandt, Manfred Schimmler, Jorge González-Domínguez, Bertil Schmidt
2016 Misc conf
Genome-Wide Association Interaction Studies with MB-MDR and maxT multiple testing correction on FPGAs.
ICCS
Sven Gundlach, Jan Christian Kässens, Lars Wienbrandt
2015 J jnl
High-speed exhaustive 3-locus interaction epistasis analysis on FPGAs.
J. Comput. Sci.
Jan Christian Kässens, Lars Wienbrandt, Jorge González-Domínguez, Bertil Schmidt, Manfred Schimmler
2015 J jnl
Large-scale genome-wide association studies on a GPU cluster using a CUDA-accelerated PGAS programming model.
Int. J. High Perform. Comput. Appl.
Jorge González-Domínguez, Jan Christian Kässens, Lars Wienbrandt, Bertil Schmidt
2015 J jnl
Parallelizing Epistasis Detection in GWAS on FPGA and GPU-Accelerated Computing Systems.
IEEE ACM Trans. Comput. Biol. Bioinform.
Jorge González-Domínguez, Lars Wienbrandt, Jan Christian Kässens, David Ellinghaus, Manfred Schimmler, Bertil Schmidt
2014 Misc conf
FPGA-based Acceleration of Detecting Statistical Epistasis in GWAS.
ICCS
Lars Wienbrandt, Jan Christian Kässens, Jorge González-Domínguez, Bertil Schmidt, David Ellinghaus, Manfred Schimmler
2014 — conf
Hybrid CPU/GPU Acceleration of Detection of 2-SNP Epistatic Interactions in GWAS.
Euro-Par
Jorge González-Domínguez, Bertil Schmidt, Jan Christian Kässens, Lars Wienbrandt
2014 C conf
UPC++ for bioinformatics: A case study using genome-wide association studies.
CLUSTER
Jan Christian Kässens, Jorge González-Domínguez, Lars Wienbrandt, Bertil Schmidt