Jan Byska

52 papers B 3Journal 34Unranked 7
YearRankTypeTitle / Venue / Authors
2026 J jnl
Foreword to special section on 15th Eurographics workshop on visual computing for biology and medicine.
Comput. Graph.
Alessio Arleo, Jan Byska, Monique Meuschke
2025 J jnl
Helveg: Diagrams for Software Documentation.
CoRR
Adam J. Stepánek, David Kuták, Barbora Kozlíková, Jan Byska
2025 J jnl
Helveg: Diagrams for Software Documentation.
IEEE Trans. Vis. Comput. Graph.
Adam J. Stepánek, David Kuták, Barbora Kozlíková, Jan Byska
2025 J jnl
Tasks and Visual Abstractions for 3D Chromatin Representation.
Comput. Graph. Forum
Adam Rychlý, Jan Byska, Barbora Kozlíková, Katarína Furmanová
2025 J jnl
Visual Support for the Loop Grafting Workflow on Proteins.
IEEE Trans. Vis. Comput. Graph.
Filip Opálený, Pavol Ulbrich, Joan Planas-Iglesias, Jan Byska, Jan Stourac, David Bednár, Katarína Furmanová, Barbora Kozlíková
2024 J jnl
Antarstick: Extracting Snow Height From Time-Lapse Photography.
Comput. Graph. Forum
Matej Lang, Radoslav Mráz, Marek Trtík, Sergej Stoppel, Jan Byska, Barbora Kozlíková
2024 J jnl
Design and evaluation of alphabetic and numeric input methods for virtual reality.
Comput. Graph.
David Kuták, Danielle Langlois, Roman Rozic, Jan Byska, Haichao Miao, Simone Kriglstein, Barbora Kozlíková
2024 J jnl
InVADo: Interactive Visual Analysis of Molecular Docking Data.
IEEE Trans. Vis. Comput. Graph.
Marco Schäfer, Nicolas Brich, Jan Byska, Sérgio M. Marques, David Bednár, Philipp Thiel, Barbora Kozlíková, Michael Krone
2024 B conf
Interactive Diagrams for Software Documentation.
VISSOFT
Adam Stspánek, David Kuták, Barbora Kozlíková, Jan Byska
2024 J jnl
Interactive Diagrams for Software Documentation.
CoRR
Adam J. Stepánek, David Kuták, Barbora Kozlíková, Jan Byska
2024 J jnl
Visual Support for the Loop Grafting Workflow on Proteins.
CoRR
Filip Opálený, Pavol Ulbrich, Joan Planas-Iglesias, Jan Byska, Jan Stourac, David Bednár, Katarína Furmanová, Barbora Kozlíková
2023 J jnl
Foreword: Special section on Molecular Graphics and Visual Analysis of Molecular Data (MolVA 2023).
Comput. Graph.
Jan Byska, Michael Krone, Björn Sommer
2023 J jnl
State of the Art of Molecular Visualization in Immersive Virtual Environments.
Comput. Graph. Forum
David Kuták, Pere-Pau Vázquez, Tobias Isenberg, Michael Krone, Marc Baaden, Jan Byska, Barbora Kozlíková, Haichao Miao
2023 — ed.
Workshop on Molecular Graphics and Visual Analysis of Molecular Data 2023, MolVA@EuroVis 2023, Leipzig, Germany, June 12, 2023
MolVA@EuroVis
Jan Byska, Michael Krone, Björn Sommer
2023 J jnl
sMolBoxes: Dataflow Model for Molecular Dynamics Exploration.
IEEE Trans. Vis. Comput. Graph.
Pavol Ulbrich, Manuela Waldner, Katarína Furmanová, Sérgio M. Marques, David Bednár, Barbora Kozlíková, Jan Byska
2023 J jnl
xOpat: eXplainable Open Pathology Analysis Tool.
Comput. Graph. Forum
Jirí Horák, Katarína Furmanová, Barbora Kozlíková, Tomás Brázdil, Petr Holub, M. Kacenga, Matej Gallo, Rudolf Nenutil, Jan Byska, Vít Rusnák
2022 J jnl
ChromoSkein: Untangling Three-Dimensional Chromatin Fiber With a Web-Based Visualization Framework.
CoRR
Matús Talcík, Filip Opálený, Tereza Clarence, Katarína Furmanová, Jan Byska, Barbora Kozlíková, David Kouril
2022 J jnl
LoopGrafter: a web tool for transplanting dynamical loops for protein engineering.
Nucleic Acids Res.
Joan Planas-Iglesias, Filip Opálený, Pavol Ulbrich, Jan Stourac, Zainab K. Sanusi, Gaspar R. P. Pinto, Andrea Schenkmayerova, Jan Byska, Jirí Damborský, Barbora Kozlíková, David Bednar
2022 J jnl
Vivern-A Virtual Environment for Multiscale Visualization and Modeling of DNA Nanostructures.
IEEE Trans. Vis. Comput. Graph.
David Kuták, Matias Nicolás Selzer, Jan Byska, Maria Luján Ganuza, Ivan Barisic, Barbora Kozlíková, Haichao Miao
2022 J jnl
sMolBoxes: Dataflow Model for Molecular Dynamics Exploration.
CoRR
Pavol Ulbrich, Manuela Waldner, Katarína Furmanová, Sérgio M. Marques, David Bednár, Barbora Kozlíková, Jan Byska
2021 — ed.
21st Eurographics Conference on Visualization, EuroVis 2019 - Posters, Porto, Portugal, June 14-18, 2021
EuroVis (Posters)
Jan Byska, Stefan Jänicke, Johanna Schmidt
2021 — ed.
4th Workshop on Molecular Graphics and Visual Analysis of Molecular Data, MolVa@EuroVis 2021, Virtual Event, Switzerland, June 14, 2021
MolVa@EuroVis
Jan Byska, Michael Krone, Björn Sommer
2021 J jnl
ChemVA: Interactive Visual Analysis of Chemical Compound Similarity in Virtual Screening.
IEEE Trans. Vis. Comput. Graph.
María Virginia Sabando, Pavol Ulbrich, Matias Nicolás Selzer, Jan Byska, Jan Mican, Ignacio Ponzoni, Axel J. Soto, Maria Luján Ganuza, Barbora Kozlíková
2021 J jnl
Foreword to the special section on molecular graphics and visual analysis of molecular data (MolVA 2021).
Comput. Graph.
Jan Byska, Michael Krone, Bjorn Sommer
2021 J jnl
VRdeo: Creating engaging educational material for asynchronous student-teacher exchange using virtual reality.
Comput. Graph.
Vojtech Bruza, Jan Byska, Jan Mican, Barbora Kozlíková
2020 — ed.
22nd Eurographics Conference on Visualization, EuroVis 2020 - Posters, Norrköping, Sweden, May 25-29, 2020 [online only]
EuroVis (Posters)
Jan Byska, Stefan Jänicke
2020 — ed.
3rd Workshop on Molecular Graphics and Visual Analysis of Molecular Data, MolVA@Eurographics/EuroVis 2020, Norrköping, Sweden, May 25, 2020 [online only]
MolVa@Eurographics/EuroVis
Jan Byska, Michael Krone, Björn Sommer
2020 J jnl
ChemVA: Interactive Visual Analysis of Chemical Compound Similarity in Virtual Screening.
CoRR
María Virginia Sabando, Pavol Ulbrich, Matias Nicolás Selzer, Jan Byska, Jan Mican, Ignacio Ponzoni, Axel J. Soto, Maria Luján Ganuza, Barbora Kozlíková
2020 J jnl
DockVis: Visual Analysis of Molecular Docking Trajectories.
Comput. Graph. Forum
Katarína Furmanová, Ondrej Vávra, Barbora Kozlíková, Jirí Damborský, Vojtech Vonásek, David Bednar, Jan Byska
2020 J jnl
Multiscale Visual Drilldown for the Analysis of Large Ensembles of Multi-Body Protein Complexes.
IEEE Trans. Vis. Comput. Graph.
Katarína Furmanová, Adam Jurcík, Barbora Kozlíková, Helwig Hauser, Jan Byska
2020 B conf
PINGU Principles of Interactive Navigation for Geospatial Understanding.
PacificVis
Zoltán Orémus, Kahin Akram Hassan, Jirí Chmelík, Michaela Knazková, Jan Byska, Renata Georgia Raidou, Barbora Kozlíková
2020 J jnl
Scale-Space Splatting: Reforming Spacetime for Cross-Scale Exploration of Integral Measures in Molecular Dynamics.
IEEE Trans. Vis. Comput. Graph.
Juraj Pálenik, Jan Byska, Stefan Bruckner, Helwig Hauser
2020 — ch.
Visual Analysis of Protein-Protein Interaction Docking Models Using COZOID Tool.
Protein-Protein Interaction Networks
Jan Byska, Adam Jurcík, Katarína Furmanová, Barbora Kozlíková, Jan J. Palecek
2020 J jnl
Visual exploration of large normal mode spaces to study protein flexibility.
Comput. Graph.
Pierre Bedoucha, Nathalie Reuter, Helwig Hauser, Jan Byska
2019 — ed.
2nd Workshop on Molecular Graphics and Visual Analysis of Molecular Data, MolVA@EuroVis 2019, Porto, Portugal, June 3, 2019
MolVa@EuroVis
Jan Byska, Michael Krone, Björn Sommer
2019 J jnl
Analysis of Long Molecular Dynamics Simulations Using Interactive Focus+Context Visualization.
Comput. Graph. Forum
Jan Byska, Thomas Trautner, Sérgio M. Marques, Jirí Damborský, Barbora Kozlíková, Manuela Waldner
2019 — conf
DockVis: Visual Analysis of Molecular Docking Data.
VCBM
Katarína Furmanová, Barbora Kozlíková, Vojtech Vonásek, Jan Byska
2019 J jnl
Multiscale Visual Drilldown for the Analysis of Large Ensembles of Multi-Body Protein Complexes.
CoRR
Katarína Furmanová, Adam Jurcík, Barbora Kozlíková, Helwig Hauser, Jan Byska
2019 B conf
Visual Analysis of Ligand Trajectories in Molecular Dynamics.
PacificVis
Adam Jurcík, Katarína Furmanová, Jan Byska, Vojtech Vonásek, Ondrej Vávra, Pavol Ulbrich, Helwig Hauser, Barbora Kozlíková
2018 — ed.
1st Workshop on Molecular Graphics and Visual Analysis of Molecular Data, MolVA@EuroVis 2018, Brno, Czech Republic, June 4, 2018
MolVa@EuroVis
Jan Byska, Michael Krone, Björn Sommer
2018 J jnl
CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories.
Bioinform.
Adam Jurcík, David Bednar, Jan Byska, Sérgio M. Marques, Katarína Furmanová, Lukas Daniel, Piia Kokkonen, Jan Brezovsky, Ondrej Strnad, Jan Stourac, Antonín Pavelka, Martin Manak, Jirí Damborský, Barbora Kozlíková
2018 J jnl
COZOID: contact zone identifier for visual analysis of protein-protein interactions.
BMC Bioinform.
Katarína Furmanová, Jan Byska, M. Eduard Gröller, Ivan Viola, Jan J. Palecek, Barbora Kozlíková
2017 J jnl
Comparative visualization of protein secondary structures.
BMC Bioinform.
Lucia Kocincová, Miroslava Jaresová, Jan Byska, Július Parulek, Helwig Hauser, Barbora Kozlíková
2017 J jnl
Interactive exploration of ligand transportation through protein tunnels.
BMC Bioinform.
Katarína Furmanová, Miroslava Jaresová, Jan Byska, Adam Jurcík, Július Parulek, Helwig Hauser, Barbora Kozlíková
2017 — conf
Watergate: Visual Exploration of Water Trajectories in Protein Dynamics.
VCBM
Viktor Vad, Jan Byska, Adam Jurcík, Ivan Viola, M. Eduard Gröller, Helwig Hauser, Sérgio M. Marques, Jirí Damborský, Barbora Kozlíková
2016 J jnl
AnimoAminoMiner: Exploration of Protein Tunnels and their Properties in Molecular Dynamics.
IEEE Trans. Vis. Comput. Graph.
Jan Byska, Mathieu Le Muzic, M. Eduard Gröller, Ivan Viola, Barbora Kozlíková
2016 — conf
Unfolding and Interactive Exploration of Protein Tunnels and their Dynamics.
VCBM/MedViz
Ivan Kolesár, Jan Byska, Július Parulek, Helwig Hauser, Barbora Kozlíková
2015 J jnl
MoleCollar and Tunnel Heat Map Visualizations for Conveying Spatio-Temporo-Chemical Properties Across and Along Protein Voids.
Comput. Graph. Forum
Jan Byska, Adam Jurcík, M. Eduard Gröller, Ivan Viola, Barbora Kozlíková
2015 — conf
Path-planning algorithm for transportation of molecules through protein tunnel bottlenecks.
SCCG
Jan Byska, Ivana Kolingerová, Barbora Kozlíková, Jirí Sochor
2015 — conf
Visibility-based approach to surface detection of tunnels in proteins.
SCCG
Adam Jurcík, Jan Byska, Jirí Sochor, Barbora Kozlíková
2014 — conf
Visualizing Movements of Protein Tunnels in Molecular Dynamics Simulations.
VCBM
Barbora Kozlíková, Adam Jurcík, Jan Byska, Ondrej Strnad, Jiri Sochor
2013 — conf
Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules.
TPCG
Jan Byska, Adam Jurcík, Jiri Sochor