Jamie R. McClelland

19 papers B 1Journal 7Unranked 11
YearRankTypeTitle / Venue / Authors
2025 conf
MICCAI (4)
Yuliang Huang, Imraj RD Singh, Thomas Joyce, Kris Thielemans, Jamie R. McClelland
2025 J jnl
CoRR
Yuliang Huang, Imraj RD Singh, Thomas Joyce, Kris Thielemans, Jamie R. McClelland
2024 conf
MICCAI (1)
Yuliang Huang, Björn Eiben, Kris Thielemans, Jamie R. McClelland
2024 J jnl
CoRR
Yuliang Huang, Björn Eiben, Kris Thielemans, Jamie R. McClelland
2023 conf
ISBI
Yuliang Huang, Kris Thielemans, Jamie R. McClelland
2018 conf
WBIR
Björn Eiben, Elena H. Tran, Martin J. Menten, Uwe Oelfke, David J. Hawkes, Jamie R. McClelland
2018 conf
MICCAI (4)
Felix J. S. Bragman, Ryutaro Tanno, Zach Eaton-Rosen, Wenqi Li, David J. Hawkes, Sébastien Ourselin, Daniel C. Alexander, Jamie R. McClelland, M. Jorge Cardoso
2018 J jnl
CoRR
Felix J. S. Bragman, Ryutaro Tanno, Zach Eaton-Rosen, Wenqi Li, David J. Hawkes, Sébastien Ourselin, Daniel C. Alexander, Jamie R. McClelland, M. Jorge Cardoso
2017 J jnl
Medical Image Anal.
Lianghao Han, Hua Dong, Jamie R. McClelland, Liangxiu Han, David J. Hawkes, Dean C. Barratt
2017 J jnl
Medical Image Anal.
Christian F. Baumgartner, Christoph Kolbitsch, Jamie R. McClelland, Daniel Rueckert, Andrew P. King
2017 conf
MICCAI (3)
Felix J. S. Bragman, Jamie R. McClelland, Joseph Jacob, John R. Hurst, David J. Hawkes
2017 J jnl
IEEE Trans. Medical Imaging
Felix J. S. Bragman, Jamie R. McClelland, Joseph Jacob, John R. Hurst, David J. Hawkes
2015 conf
IPMI
Christian F. Baumgartner, Alberto Gómez, Lisa M. Koch, Richard James Housden, Christoph Kolbitsch, Jamie R. McClelland, Daniel Rueckert, Andy P. King
2014 conf
ISBI
Christian F. Baumgartner, Christoph Kolbitsch, Jamie R. McClelland, Daniel Rueckert, Andy P. King
2014 conf
WBIR
Jamie R. McClelland, Benjamin A. S. Champion, David J. Hawkes
2014 J jnl
Medical Image Anal.
Christian F. Baumgartner, Christoph Kolbitsch, Daniel R. Balfour, Paul K. Marsden, Jamie R. McClelland, Daniel Rueckert, Andrew P. King
2014 conf
MICCAI (3)
Felix J. S. Bragman, Jamie R. McClelland, Marc Modat, Sébastien Ourselin, John R. Hurst, David J. Hawkes
2013 B conf
Image Processing
Holger R. Roth, Jamie R. McClelland, Marc Modat, Thomas Hampshire, Darren Boone, Emma Helbren, Andrew Plumb, Mingxing Hu, Sébastien Ourselin, Steve Halligan, David J. Hawkes
2005 conf
Image-Guided Procedures
Jamie R. McClelland, Adam G. Chandler, Jane M. Blackall, S. Ahmad, David B. Landau, David J. Hawkes
tests/unit/test_decompile_decompiler.py
← Index tests/unit/test_decompile_decompiler.py python
"""Unit tests (mocked BN) for bninja/decompiler.py — BinaryNinjaDecompiler."""
import sys
import json
import time
import pytest
from unittest.mock import MagicMock, patch, mock_open

from tests.unit.conftest_binja_stubs import (
    install_binja_stubs,
    MockFunction,
    MockBasicBlock,
    MockDisassemblyLine,
    MockToken,
    MockSymbol,
    MockBinaryView,
    MockEdge,
    SymbolType,
    InstructionTextTokenType,
    BranchType,
)

install_binja_stubs()

from redb.extractors.decompiler.bninja.decompiler import (
    BinaryNinjaDecompiler,
    is_lib_or_thunk,
)
from redb.extractors.decompiler.bninja.function_type import FunctionType


# ============================================================================
# 10a. BinaryNinjaDecompiler
# ============================================================================


class TestBinaryNinjaDecompilerLogError:
    def _make_decompiler(self):
        with patch.object(BinaryNinjaDecompiler, "__init__", lambda self, *a, **kw: None):
            d = BinaryNinjaDecompiler.__new__(BinaryNinjaDecompiler)
            d.log = MagicMock()
            d.errors = []
            d.filepath = "/fake/binary"
            d.bv = None
            d.analysis_results = None
            d.exporters = []
            d.index_prefix = None
            d.filetype = None
            d.goresym = None
            d.BNINJA_TIMEOUT = 60
            return d

    def test_log_error_appends(self):
        d = self._make_decompiler()
        d.log_error("test error", "func1", 0x1000, Exception("boom"), "extract")
        assert len(d.errors) == 1

    def test_log_error_schema(self):
        d = self._make_decompiler()
        d.log_error("test error", "func1", 0x1000, Exception("boom"), "extract")
        error = d.errors[0]
        expected_keys = [
            "function_name",
            "function_address",
            "error_location",
            "error_message",
            "error_details",
            "error_type",
            "timestamp",
        ]
        for key in expected_keys:
            assert key in error, f"Missing key: {key}"


class TestBinaryNinjaDecompilerIsTooFewBlocks:
    def _make_decompiler(self):
        with patch.object(BinaryNinjaDecompiler, "__init__", lambda self, *a, **kw: None):
            d = BinaryNinjaDecompiler.__new__(BinaryNinjaDecompiler)
            d.log = MagicMock()
            d.errors = []
            d.MIN_FUNCTION_SIZE = 10
            return d

    def test_is_too_few_blocks_none(self):
        d = self._make_decompiler()
        func = MagicMock()
        func.basic_blocks = None
        assert d.is_too_few_blocks(func) is False

    def test_is_too_few_blocks_empty(self):
        # Empty basic_blocks now returns True because Binja creates function
        # stubs with empty blocks before analysis completes — we no longer
        # skip these so they get filtered downstream instead.
        d = self._make_decompiler()
        func = MagicMock()
        func.basic_blocks = []
        assert d.is_too_few_blocks(func) is True

    def test_is_too_few_blocks_small_single(self):
        d = self._make_decompiler()
        block = MagicMock()
        block.disassembly_text = [MagicMock() for _ in range(5)]  # < 10
        func = MagicMock()
        func.basic_blocks = [block]
        assert d.is_too_few_blocks(func) is False

    def test_is_too_few_blocks_large_single(self):
        d = self._make_decompiler()
        block = MagicMock()
        block.disassembly_text = [MagicMock() for _ in range(15)]  # >= 10
        func = MagicMock()
        func.basic_blocks = [block]
        assert d.is_too_few_blocks(func) is True

    def test_is_too_few_blocks_multiple(self):
        d = self._make_decompiler()
        func = MagicMock()
        func.basic_blocks = [MagicMock(), MagicMock()]
        assert d.is_too_few_blocks(func) is True


class TestIsLibOrThunk:
    def test_is_lib_or_thunk_user(self):
        func = MagicMock()
        func.symbol.type = SymbolType.FunctionSymbol
        func.is_thunk = False
        assert is_lib_or_thunk(func) is True  # NOT filtered

    def test_is_lib_or_thunk_thunk(self):
        func = MagicMock()
        func.symbol.type = SymbolType.FunctionSymbol
        func.is_thunk = True
        assert is_lib_or_thunk(func) is False  # Filtered out

    def test_is_lib_or_thunk_external(self):
        func = MagicMock()
        func.symbol.type = SymbolType.ImportedFunctionSymbol
        func.is_thunk = False
        assert is_lib_or_thunk(func) is False  # Filtered out


class TestBinaryNinjaDecompilerExtract:
    def _make_decompiler(self):
        with patch.object(BinaryNinjaDecompiler, "__init__", lambda self, *a, **kw: None):
            d = BinaryNinjaDecompiler.__new__(BinaryNinjaDecompiler)
            d.log = MagicMock()
            d.errors = []
            d.filepath = "/fake/binary"
            d.bv = MagicMock()
            d.analysis_results = None
            d.exporters = []
            d.index_prefix = None
            d.filetype = None
            d.goresym = None
            d.BNINJA_TIMEOUT = 60
            d.arch = MagicMock()
            return d

    def test_extract_success(self):
        d = self._make_decompiler()
        mock_results = {
            "decompiled": [{"test": True}],
            "disassembled": [],
            "cfg": [],
            "llil": [],
            "errors": [],
            "strings": [],
            "mlil": [],
        }
        with patch.object(d, "analyze_binary", return_value=mock_results):
            result = d.extract()
            assert result is True
            assert d.analysis_results == mock_results

    def test_extract_failure(self):
        d = self._make_decompiler()
        with patch.object(d, "analyze_binary", return_value=None):
            result = d.extract()
            assert result is False

    def test_tag(self):
        d = self._make_decompiler()
        assert d.tag() == "DECOMPILED"


class TestBinaryNinjaDecompilerAnalyzeBinary:
    def _make_decompiler(self):
        with patch.object(BinaryNinjaDecompiler, "__init__", lambda self, *a, **kw: None):
            d = BinaryNinjaDecompiler.__new__(BinaryNinjaDecompiler)
            d.log = MagicMock()
            d.errors = []
            d.filepath = "/fake/binary"
            d.analysis_results = None
            d.exporters = []
            d.index_prefix = None
            d.filetype = None
            d.goresym = None
            d.BNINJA_TIMEOUT = 60
            d.arch = MagicMock()
            d.MIN_FUNCTION_SIZE = 10
            return d

    def test_analyze_binary_links_hlil_disasm(self):
        """Bi-directional hash linkage between decompiled and disassembled."""
        d = self._make_decompiler()
        d.bv = MagicMock()
        d.bv.functions = []
        # Mock methods to return controlled data
        with patch.object(d, "extract_hlil") as mock_hlil, \
             patch.object(d, "extract_disasm") as mock_disasm, \
             patch.object(d, "extract_cfg", return_value=None), \
             patch.object(d, "extract_lowlevel", return_value=None):

            mock_hlil.return_value = {
                "decompiled_function_hash": "HLIL_HASH",
                "decompiled_function_name": "test",
                "decompiled_function": "code",
            }
            mock_disasm.return_value = {
                "disassembled_function_hash": "DISASM_HASH",
                "disassembled_function_no_addresses": "asm",
            }

            # Manually feed one function
            mock_func = MagicMock()
            mock_func.symbol.type = SymbolType.FunctionSymbol
            mock_func.is_thunk = False
            mock_func.basic_blocks = [MagicMock(), MagicMock()]
            d.bv.functions = [mock_func]

            results = d.analyze_binary()
            if results and results["decompiled"]:
                hlil_r = results["decompiled"][0]
                disasm_r = results["disassembled"][0]
                assert hlil_r["disassembled_function_hash"] == "DISASM_HASH"
                assert disasm_r["decompiled_function_hash"] == "HLIL_HASH"

    def test_analyze_binary_links_llil_disasm(self):
        """Bi-directional linkage between LLIL and disassembly."""
        d = self._make_decompiler()
        d.bv = MagicMock()

        with patch.object(d, "extract_hlil", return_value=None), \
             patch.object(d, "extract_disasm") as mock_disasm, \
             patch.object(d, "extract_cfg", return_value=None), \
             patch.object(d, "extract_lowlevel") as mock_llil:

            mock_disasm.return_value = {
                "disassembled_function_hash": "DISASM_HASH",
                "disassembled_function_no_addresses": "asm",
            }
            mock_llil.return_value = {
                "sha256_llil": "LLIL_HASH",
                "tlsh_llil": "tlsh_val",
            }

            mock_func = MagicMock()
            mock_func.symbol.type = SymbolType.FunctionSymbol
            mock_func.is_thunk = False
            mock_func.basic_blocks = [MagicMock(), MagicMock()]
            d.bv.functions = [mock_func]

            results = d.analyze_binary()
            if results and results["llil"]:
                llil_r = results["llil"][0]
                assert llil_r["disassembled_function_hash"] == "DISASM_HASH"

    def test_analyze_binary_links_cfg_disasm(self):
        """CFG gets disassembled_function_hash."""
        d = self._make_decompiler()
        d.bv = MagicMock()

        with patch.object(d, "extract_hlil", return_value=None), \
             patch.object(d, "extract_disasm") as mock_disasm, \
             patch.object(d, "extract_cfg") as mock_cfg, \
             patch.object(d, "extract_lowlevel", return_value=None):

            mock_disasm.return_value = {
                "disassembled_function_hash": "DISASM_HASH",
                "disassembled_function_no_addresses": "asm",
            }
            mock_cfg.return_value = {
                "function_address": 0x1000,
                "cyclomatic_complexity": 3,
            }

            mock_func = MagicMock()
            mock_func.symbol.type = SymbolType.FunctionSymbol
            mock_func.is_thunk = False
            mock_func.basic_blocks = [MagicMock(), MagicMock()]
            d.bv.functions = [mock_func]

            results = d.analyze_binary()
            if results and results["cfg"]:
                cfg_r = results["cfg"][0]
                assert cfg_r["disassembled_function_hash"] == "DISASM_HASH"

    def test_analyze_binary_sets_cyclomatic(self):
        """cyclomatic_complexity set on disasm from CFG."""
        d = self._make_decompiler()
        d.bv = MagicMock()

        with patch.object(d, "extract_hlil", return_value=None), \
             patch.object(d, "extract_disasm") as mock_disasm, \
             patch.object(d, "extract_cfg") as mock_cfg, \
             patch.object(d, "extract_lowlevel", return_value=None):

            mock_disasm.return_value = {
                "disassembled_function_hash": "HASH",
                "disassembled_function_no_addresses": "asm",
            }
            mock_cfg.return_value = {
                "function_address": 0x1000,
                "cyclomatic_complexity": 7,
            }

            mock_func = MagicMock()
            mock_func.symbol.type = SymbolType.FunctionSymbol
            mock_func.is_thunk = False
            mock_func.basic_blocks = [MagicMock(), MagicMock()]
            d.bv.functions = [mock_func]

            results = d.analyze_binary()
            if results and results["disassembled"]:
                disasm_r = results["disassembled"][0]
                assert disasm_r.get("cyclomatic_complexity") == 7


class TestApplyGoReSym:
    def _make_decompiler(self):
        with patch.object(BinaryNinjaDecompiler, "__init__", lambda self, *a, **kw: None):
            d = BinaryNinjaDecompiler.__new__(BinaryNinjaDecompiler)
            d.log = MagicMock()
            d.errors = []
            d.bv = MagicMock()
            return d

    def test_apply_goresym_user_functions(self):
        d = self._make_decompiler()
        d.goresym = "/tmp/goresym.json"
        data = {
            "UserFunctions": [{"Start": 0x1000, "FullName": "main.main"}],
        }
        with patch("builtins.open", mock_open(read_data=json.dumps(data))):
            d._BinaryNinjaDecompiler__apply_goresym()
            d.bv.define_user_symbol.assert_called()

    def test_apply_goresym_std_functions(self):
        d = self._make_decompiler()
        d.goresym = "/tmp/goresym.json"
        data = {
            "StdFunctions": [{"Start": 0x2000, "FullName": "runtime.main"}],
        }
        with patch("builtins.open", mock_open(read_data=json.dumps(data))):
            d._BinaryNinjaDecompiler__apply_goresym()
            d.bv.define_user_symbol.assert_called()

    def test_apply_goresym_invalid_json(self):
        d = self._make_decompiler()
        d.goresym = "/tmp/goresym.json"
        with patch("builtins.open", mock_open(read_data="not json {")):
            d._BinaryNinjaDecompiler__apply_goresym()
            # Should log error but not crash
            d.log.log_error if hasattr(d.log, 'log_error') else None
            # Just verify no exception raised