Jamie P. McCusker

69 papers A* 1B 4C 1Misc 1Journal 21Unranked 41
YearRankTypeTitle / Venue / Authors
2025 J jnl
LLM experimentation through knowledge graphs: Towards improved management, repeatability, and verification.
J. Web Semant.
John S. Erickson, Henrique Santos, Vládia Pinheiro, Jamie P. McCusker, Deborah L. McGuinness
2024 — conf
ARCLIGHT: Automated Clustering and Curriculum Learning Guided by Human Training.
HGAIS@ISWC
Jamie P. McCusker, Henrique Santos, Rishi Singh, Sabbir M. Rashid, Abraham Sanders, Grace Roessling, Hongji Guo, Bashirul Azam Biswas, Deborah L. McGuinness, Tomek Strzalkowski, Qiang Ji, Jay Miller
2024 — conf
ChatBS: An Exploratory Sandbox for Bridging Large Language Models with the Open Web.
ISWC (Posters/Demos/Industry)
John S. Erickson, Henrique Santos, Jamie P. McCusker, Sola Shirai, Deborah L. McGuinness, James A. Hendler
2024 — conf
Customizable Knowledge Graph Visualization using the Whyis Knowledge Explorer.
VOILA@ISWC
Jamie P. McCusker
2024 — conf
Supporting Next-Generation Science with a Semantic Ecosystem.
ISWC (Posters/Demos/Industry)
Sabbir M. Rashid, John S. Erickson, Jamie P. McCusker, Henrique Santos, Paulo Pinheiro, Shruthi Chari, Matthew Johnson, Jade S. Franklin, Kelsey Rook, Deborah L. McGuinness
2023 B conf
A Concise Ontology to Support Research on Complex, Multimodal Clinical Reasoning.
ESWC
Sabbir M. Rashid, Jamie P. McCusker, Daniel M. Gruen, Oshani Seneviratne, Deborah L. McGuinness
2023 — conf
An Ontology for Reasoning About Fairness in Regression and Machine Learning.
KGSWC
Jade S. Franklin, Hannah Powers, John S. Erickson, Jamie P. McCusker, Deborah L. McGuinness, Kristin P. Bennett
2023 J jnl
LOKE: Linked Open Knowledge Extraction for Automated Knowledge Graph Construction.
CoRR
Jamie P. McCusker
2023 — conf
SciKG: Tutorial on Building Scientific Knowledge Graphs from Data, Data Dictionaries, and Codebooks.
ESWC Workshops
Henrique Santos, Paulo Pinheiro, Jamie P. McCusker, Sabbir M. Rashid, Deborah L. McGuinness
2023 J jnl
Semantically enabling clinical decision support recommendations.
J. Biomed. Semant.
Oshani Seneviratne, Amar K. Das, Shruthi Chari, Nkechinyere N. Agu, Sabbir M. Rashid, Jamie P. McCusker, Jade S. Franklin, Miao Qi, Kristin P. Bennett, Ching-Hua Chen, James A. Hendler, Deborah L. McGuinness
2023 B ed.
The Semantic Web - 20th International Conference, ESWC 2023, Hersonissos, Crete, Greece, May 28 - June 1, 2023, Proceedings
ESWC
Catia Pesquita, Ernesto Jiménez-Ruiz, Jamie P. McCusker, Daniel Faria, Mauro Dragoni, Anastasia Dimou, Raphaël Troncy, Sven Hertling
2023 B conf
Whyis 2: An Open Source Framework for Knowledge Graph Development and Research.
ESWC
Jamie P. McCusker, Deborah L. McGuinness
2022 C conf
An Ontology for Fairness Metrics.
AIES
Jade S. Franklin, Karan Bhanot, Mohamed F. Ghalwash, Kristin P. Bennett, Jamie P. McCusker, Deborah L. McGuinness
2022 A* conf
Can Machines Read Coding Manuals Yet? - A Benchmark for Building Better Language Models for Code Understanding.
AAAI
Ibrahim Abdelaziz, Julian Dolby, Jamie P. McCusker, Kavitha Srinivas
2021 B conf
A Toolkit for Generating Code Knowledge Graphs.
K-CAP
Ibrahim Abdelaziz, Julian Dolby, Jamie P. McCusker, Kavitha Srinivas
2021 J jnl
Can Machines Read Coding Manuals Yet? - A Benchmark for Building Better Language Models for Code Understanding.
CoRR
Ibrahim Abdelaziz, Julian Dolby, Jamie P. McCusker, Kavitha Srinivas
2021 — conf
Creating and Visualizing the Materials Science Knowledge Graph with Whyis.
ISWC (Posters/Demos/Industry)
Jamie P. McCusker, Michael Deagen, Tolulomo Fateye, Anya Wallace, Sabbir M. Rashid, Deborah L. McGuinness
2021 J jnl
Geospatial Reasoning with Shapefiles for Supporting Policy Decisions.
CoRR
Henrique Santos, Jamie P. McCusker, Deborah L. McGuinness
2020 — conf
A Demonstration of CodeBreaker: A Machine Interpretable Knowledge Graph for Code.
ISWC (Demos/Industry)
Ibrahim Abdelaziz, Kavitha Srinivas, Julian Dolby, Jamie P. McCusker
2020 — conf
A Semantic Framework for Enabling Radio Spectrum Policy Management and Evaluation.
ISWC (2)
Henrique Santos, Alice Mulvehill, John S. Erickson, Jamie P. McCusker, Minor Gordon, Owen Xie, Samuel Stouffer, Gerard Capraro, Alex Pidwerbetsky, John Burgess, Allan Berlinsky, Kurt A. Turck, Jonathan D. Ashdown, Deborah L. McGuinness
2020 J jnl
A Semantic Framework for Enabling Radio Spectrum Policy Management and Evaluation.
CoRR
Henrique Santos, Alice Mulvehill, John S. Erickson, Jamie P. McCusker, Minor Gordon, Owen Xie, Samuel Stouffer, Gerard Capraro, Alex Pidwerbetsky, John Burgess, Allan Berlinsky, Kurt A. Turck, Jonathan D. Ashdown, Deborah L. McGuinness
2020 J jnl
Graph4Code: A Machine Interpretable Knowledge Graph for Code.
CoRR
Kavitha Srinivas, Ibrahim Abdelaziz, Julian Dolby, Jamie P. McCusker
2020 Misc conf
Knowledge Extraction of Cohort Characteristics in Research Publications.
AMIA
Jay D. S. Franklin, Shruthi Chari, Morgan Foreman, Oshani Seneviratne, Daniel M. Gruen, Jamie P. McCusker, Amar K. Das, Deborah L. McGuinness
2020 — conf
NanoMine: A Knowledge Graph for Nanocomposite Materials Science.
ISWC (2)
Jamie P. McCusker, Neha Keshan, Sabbir M. Rashid, Michael Deagen, L. Catherine Brinson, Deborah L. McGuinness
2020 — conf
The Dynamic Spectrum Access Policy Framework in Action.
ISWC (Demos/Industry)
Henrique Santos, Alice Mulvehill, John S. Erickson, Jamie P. McCusker, Minor Gordon, Owen Xie, Samuel Stouffer, Gerard Capraro, Alex Pidwerbetsky, John Burgess, Allan Berlinsky, Kurt A. Turck, Jonathan D. Ashdown, Deborah L. McGuinness
2019 — conf
A Linked Data Representation for Summary Statistics and Grouping Criteria.
SAWSemStats@ISWC
Jamie P. McCusker, Michel Dumontier, Shruthi Chari, Joanne S. Luciano, Deborah L. McGuinness
2019 — conf
Automating Population Health Studies Through Semantics and Statistics.
SAWSemStats@ISWC
Alexander New, Miao Qi, Shruthi Chari, Sabbir M. Rashid, Oshani Seneviratne, Jamie P. McCusker, John S. Erickson, Deborah L. McGuinness, Kristin P. Bennett
2019 — conf
Enabling Trust in Clinical Decision Support Recommendations through Semantics.
SeWeBMeDa@ISWC
Oshani Seneviratne, Amar K. Das, Shruthi Chari, Nkechinyere N. Agu, Sabbir M. Rashid, Ching-Hua Chen, Jamie P. McCusker, James A. Hendler, Deborah L. McGuinness
2019 — conf
G-PROV: Provenance Management for Clinical Practice Guidelines.
SeWeBMeDa@ISWC
Nkechinyere N. Agu, Neha Keshan, Shruthi Chari, Oshani Seneviratne, Jamie P. McCusker, Deborah L. McGuinness
2019 — conf
Making Study Populations Visible Through Knowledge Graphs.
ISWC (2)
Shruthi Chari, Miao Qi, Nkechinyere N. Agu, Oshani Seneviratne, Jamie P. McCusker, Kristin P. Bennett, Amar K. Das, Deborah L. McGuinness
2019 J jnl
Making Study Populations Visible through Knowledge Graphs.
CoRR
Shruthi Chari, Miao Qi, Nkechinyere N. Agu, Oshani Seneviratne, Jamie P. McCusker, Kristin P. Bennett, Amar K. Das, Deborah L. McGuinness
2019 — conf
Ontology-enabled Analysis of Study Populations.
ISWC (Satellites)
Shruthi Chari, Miao Qi, Nkechinyere N. Agu, Oshani Seneviratne, Jamie P. McCusker, Kristin P. Bennett, Amar K. Das, Deborah L. McGuinness
2019 — conf
Reflections on: Finding Melanoma Drugs Through a Probabilistic Knowledge Graph.
JT@ISWC
Jamie P. McCusker, Michel Dumontier, Rui Yan, Sylvia He, Jonathan S. Dordick, Deborah L. McGuinness
2018 — conf
Annotating Diverse Scientific Data With HAScO.
ONTOBRAS
Paulo Pinheiro, Marcello Peixoto Bax, Henrique Santos, Sabbir M. Rashid, Zhicheng Liang, Yue Liu, Yarden Ne'eman, Jamie P. McCusker, Deborah L. McGuinness
2018 — conf
Developing Scientific Knowledge Graphs Using Whyis.
SemSci@ISWC
Jamie P. McCusker, Sabbir M. Rashid, Nkechinyere Agu, Kristin P. Bennett, Deborah L. McGuinness
2018 — conf
Knowledge Integration for Disease Characterization: A Breast Cancer Example.
ISWC (2)
Oshani Seneviratne, Sabbir M. Rashid, Shruthi Chari, Jamie P. McCusker, Kristin P. Bennett, James A. Hendler, Deborah L. McGuinness
2018 J jnl
Knowledge Integration for Disease Characterization: A Breast Cancer Example.
CoRR
Oshani Seneviratne, Sabbir M. Rashid, Shruthi Chari, Jamie P. McCusker, Kristin P. Bennett, James A. Hendler, Deborah L. McGuinness
2018 — conf
Ontology-enabled Breast Cancer Characterization.
ISWC (P&D/Industry/BlueSky)
Oshani Seneviratne, Sabbir M. Rashid, Shruthi Chari, Jamie P. McCusker, Kristin P. Bennett, Jim Hendler, Deborah L. McGuinness
2018 — conf
The Whyis Knowledge Graph Framework in Action.
ISWC (P&D/Industry/BlueSky)
Jamie P. McCusker, Sabbir M. Rashid, Nkechinyere Agu, Kristin P. Bennett, Deborah L. McGuinness
2017 — conf
An Ontology for a Polymer Nanocomposite Community Data Resource.
WebSci
Vipula Rawte, Jamie P. McCusker, He Zhao, L. Catherine Brinson, Wei Chen, Linda Schadler, Deborah L. McGuinness
2017 — conf
Broad, Interdisciplinary Science
WebSci
Jamie P. McCusker, Sabbir M. Rashid, Zhicheng Liang, Yue Liu, Katherine Chastain, Paulo Pinheiro, Jeanette A. Stingone, Deborah L. McGuinness
2017 J jnl
Finding melanoma drugs through a probabilistic knowledge graph.
PeerJ Comput. Sci.
Jamie P. McCusker, Michel Dumontier, Rui Yan, Sylvia He, Jonathan S. Dordick, Deborah L. McGuinness
2017 — conf
The Semantic Data Dictionary Approach to Data Annotation & Integration.
SemSci@ISWC
Sabbir M. Rashid, Katherine Chastain, Jeanette A. Stingone, Deborah L. McGuinness, Jamie P. McCusker
2016 J jnl
Finding melanoma drugs through a probabilistic knowledge graph.
PeerJ Prepr.
Jamie P. McCusker, Michel Dumontier, Rui Yan, Sylvia He, Jonathan S. Dordick, Deborah L. McGuinness
2015 J jnl
Formalizing the semantics of sea ice.
Earth Sci. Informatics
Ruth E. Duerr, Jamie P. McCusker, Mark A. Parsons, Siri Jodha Singh Khalsa, Peter L. Pulsifer, Cassidy Thompson, Rui Yan, Deborah L. McGuinness, Peter Fox
2014 — conf
A Nanopublication Framework for Biological Networks using Cytoscape.js.
ICBO
Jamie P. McCusker, Rui Yan, Kusum Solanki, John S. Erickson, Cynthia Chang, Michel Dumontier, Jonathan S. Dordick, Deborah L. McGuinness
2014 — conf
Identifying First Responder Communities Using Social Network Analysis.
ISWC (Posters & Demos)
John S. Erickson, Katherine Chastain, Zachary Fry, Jamie P. McCusker, Rui Yan, Evan W. Patton, Deborah L. McGuinness
2014 J jnl
The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery.
J. Biomed. Semant.
Michel Dumontier, Christopher J. O. Baker, Joachim Baran, Alison Callahan, Leonid L. Chepelev, Jose Cruz-Toledo, Nicholas R. Del Rio, Geraint Duck, Laura Inés Furlong, Nichealla Keath, Dana Klassen, Jamie P. McCusker, Núria Queralt-Rosinach, Matthias Samwald, Natalia Villanueva-Rosales, Mark D. Wilkinson, Robert Hoehndorf
2013 — conf
Next Generation Cancer Data Discovery, Access, and Integration Using Prizms and Nanopublications.
DILS
Jamie P. McCusker, Timothy Lebo, Michael Krauthammer, Deborah L. McGuinness
2013 — conf
SemantEco: a next-generation web observatory.
WWW (Companion Volume)
A. Patrice Seyed, Timothy Lebo, Evan W. Patton, Jamie P. McCusker, Deborah L. McGuinness
2013 — conf
Towards Next Generation Health Data Exploration: A Data Cube-Based Investigation into Population Statistics for Tobacco.
HICSS
Jamie P. McCusker, Deborah L. McGuinness, Jeongmin Lee, Chavon Thomas, Paul Courtney, Zaria Tatalovich, Noshir S. Contractor, Glen D. Morgan, Abdul R. Shaikh
2012 J jnl
A semantic web framework to integrate cancer omics data with biological knowledge.
BMC Bioinform.
Matthew Holford, Jamie P. McCusker, Kei-Hoi Cheung, Michael Krauthammer
2012 — conf
Functional Requirements for Information Resource Provenance on the Web.
IPAW
Jamie P. McCusker, Timothy Lebo, Alvaro Graves, Dominic DiFranzo, Paulo Pinheiro, Deborah L. McGuinness
2012 J jnl
Parallel Identities for Managing Open Government Data.
IEEE Intell. Syst.
Jamie P. McCusker, Timothy Lebo, Cynthia Chang, Deborah L. McGuinness, Paulo Pinheiro da Silva
2012 — conf
Public Health Surveillance Using Global Health Explorer.
SATBI+SWIM
Jamie P. McCusker, Jeongmin Lee, Chavon Thomas, Deborah L. McGuinness
2012 — conf
Towards Semantically Enabled Next Generation Community Health Information Portals: The PopSciGrid Pilot.
HICSS
Deborah L. McGuinness, Timothy Lebo, Li Ding, Jamie P. McCusker, Abdul R. Shaikh, Richard P. Moser, Glen D. Morgan, Zaria Tatalovich, Gordon Willis, Bradford W. Hesse, Noshir S. Contractor, Paul Courtney
2012 J jnl
Translating standards into practice - One Semantic Web API for Gene Expression.
J. Biomed. Informatics
Helena F. Deus, Eric Prud'hommeaux, Michael Miller, Jun Zhao, James Malone, Tomasz Adamusiak, Jamie P. McCusker, Sudeshna Das, Philippe Rocca-Serra, Ronan Fox, M. Scott Marshall
2011 J jnl
Linked provenance data: A semantic Web-based approach to interoperable workflow traces.
Future Gener. Comput. Syst.
Li Ding, James Michaelis, Jamie P. McCusker, Deborah L. McGuinness
2011 J jnl
The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside.
J. Biomed. Semant.
Joanne S. Luciano, Bosse Andersson, Colin R. Batchelor, Olivier Bodenreider, Tim Clark, Christine K. Denney, Christopher Domarew, Thomas Gambet, Lee Harland, Anja Jentzsch, Vipul Kashyap, Peter J. Kos, Julia Kozlovsky, Timothy Lebo, M. Scott Marshall, Jamie P. McCusker, Deborah L. McGuinness, Chimezie Ogbuji, Elgar Pichler, Robert L. Powers, Eric Prud'hommeaux, Matthias Samwald, Lynn M. Schriml, Peter J. Tonellato, Patricia L. Whetzel, Jun Zhao, Susie Stephens, Michel Dumontier
2011 — conf
Towards an Ontology for Conceptual Modeling.
ICBO
Jamie P. McCusker, Joanne S. Luciano, Deborah L. McGuinness
2011 — conf
Translating standards into practice: one semantic web API for gene expression.
SWAT4LS
Helena F. Deus, Jun Zhao, Jamie P. McCusker, Ronan Fox, Eric Prud'hommeaux, James Malone, Sudeshna Das, Michael Miller, Tomasz Adamusiak, Philippe Rocca-Serra, M. Scott Marshall
2011 — conf
Where did you hear that? Information and the Sources They Come From.
LISC
Jamie P. McCusker, Timothy Lebo, Li Ding, Cynthia Chang, Paulo Pinheiro da Silva, Deborah L. McGuinness
2010 J jnl
Analysis Of Cancer Omics Data In A Semantic Web Framework
CoRR
Matthew Holford, Jamie P. McCusker, Kei-Hoi Cheung, Michael Krauthammer
2010 — conf
Analysis of Cancer Omics Data In A Semantic Web Framework.
SWAT4LS
Matthew Holford, Jamie P. McCusker, Kei-Hoi Cheung, Michael Krauthammer
2010 — conf
Explorations into the Provenance of High Throughput Biomedical Experiments.
IPAW
Jamie P. McCusker, Deborah L. McGuinness
2010 — conf
Towards Identity in Linked Data.
OWLED
Jamie P. McCusker, Deborah L. McGuinness
2010 — conf
When owl: sameAs Isn't the Same: An Analysis of Identity in Linked Data.
ISWC (1)
Harry Halpin, Patrick J. Hayes, Jamie P. McCusker, Deborah L. McGuinness, Henry S. Thompson
2009 J jnl
Semantic web data warehousing for caGrid.
BMC Bioinform.
Jamie P. McCusker, Joshua A. Phillips, Alejandra N. González-Beltrán, Anthony Finkelstein, Michael Krauthammer
2008 J jnl
Yale Image Finder (YIF): a new search engine for retrieving biomedical images.
Bioinform.
Songhua Xu, Jamie P. McCusker, Michael Krauthammer