James R. Clough

47 papers Journal 27Unranked 20

Year	Rank	Type	Title / Venue / Authors
2023	J	`jnl`	A Persistent Homology-Based Topological Loss for CNN-Based Multiclass Segmentation of CMR. IEEE Trans. Medical Imaging Nick Byrne, James R. Clough, Israel Valverde, Giovanni Montana, Andrew P. King
2022	J	`jnl`	A Topological Loss Function for Deep-Learning Based Image Segmentation Using Persistent Homology. IEEE Trans. Pattern Anal. Mach. Intell. James R. Clough, Nicholas Byrne, Ilkay Öksüz, Veronika A. Zimmer, Julia A. Schnabel, Andrew P. King
2021	J	`jnl`	A persistent homology-based topological loss for CNN-based multi-class segmentation of CMR. CoRR Nick Byrne, James R. Clough, Isra Valverde, Giovanni Montana, Andrew P. King
2021	J	`jnl`	Left Ventricle Quantification Challenge: A Comprehensive Comparison and Evaluation of Segmentation and Regression for Mid-Ventricular Short-Axis Cardiac MR Data. IEEE J. Biomed. Health Informatics Wufeng Xue, Jiahui Li, Zhiqiang Hu, Eric Kerfoot, James R. Clough, Ilkay Öksüz, Hao Xu, Vicente Grau, Fumin Guo, Matthew Ng, Xiang Li, Quanzheng Li, Lihong Liu, Jin Ma, Elias Grinias, Georgios Tziritas, Wenjun Yan, Angélica Atehortúa, Mireille Garreau, Yeonggul Jang, Alejandro Debus, Enzo Ferrante, Guanyu Yang, Tiancong Hua, Shuo Li
2020	—	`conf`	A Persistent Homology-Based Topological Loss Function for Multi-class CNN Segmentation of Cardiac MRI. M&Ms and EMIDEC/STACOM@MICCAI Nick Byrne, James R. Clough, Giovanni Montana, Andrew P. King
2020	J	`jnl`	A persistent homology-based topological loss function for multi-class CNN segmentation of cardiac MRI. CoRR Nick Byrne, James R. Clough, Giovanni Montana, Andrew P. King
2020	J	`jnl`	Deep Learning-Based Detection and Correction of Cardiac MR Motion Artefacts During Reconstruction for High-Quality Segmentation. IEEE Trans. Medical Imaging Ilkay Öksüz, James R. Clough, Bram Ruijsink, Esther Puyol-Antón, Aurélien Bustin, Gastão Cruz, Claudia Prieto, Andrew P. King, Julia A. Schnabel
2020	—	`conf`	Interpretable Deep Models for Cardiac Resynchronisation Therapy Response Prediction. MICCAI (1) Esther Puyol-Antón, Chen Chen, James R. Clough, Bram Ruijsink, Baldeep S. Sidhu, Justin Gould, Bradley Porter, Mark K. Elliott, Vishal Mehta, Daniel Rueckert, Christopher A. Rinaldi, Andrew P. King
2020	J	`jnl`	Interpretable Deep Models for Cardiac Resynchronisation Therapy Response Prediction. CoRR Esther Puyol-Antón, Chen Chen, James R. Clough, Bram Ruijsink, Baldeep S. Sidhu, Justin Gould, Bradley Porter, Mark K. Elliott, Vishal Mehta, Daniel Rueckert, Christopher A. Rinaldi, Andrew P. King
2020	J	`jnl`	Weighted Manifold Alignment using Wave Kernel Signatures for Aligning Medical Image Datasets. IEEE Trans. Pattern Anal. Mach. Intell. James R. Clough, Daniel R. Balfour, Gastão Cruz, Paul K. Marsden, Claudia Prieto, Andrew J. Reader, Andrew P. King
2019	J	`jnl`	A Topological Loss Function for Deep-Learning based Image Segmentation using Persistent Homology. CoRR James R. Clough, Ilkay Öksüz, Nicholas Byrne, Veronika A. Zimmer, Julia A. Schnabel, Andrew P. King
2019	—	`conf`	Assessing the Impact of Blood Pressure on Cardiac Function Using Interpretable Biomarkers and Variational Autoencoders. STACOM@MICCAI Esther Puyol-Antón, Bram Ruijsink, James R. Clough, Ilkay Öksüz, Daniel Rueckert, Reza Razavi, Andrew P. King
2019	J	`jnl`	Assessing the Impact of Blood Pressure on Cardiac Function Using Interpretable Biomarkers and Variational Autoencoders. CoRR Esther Puyol-Antón, Bram Ruijsink, James R. Clough, Ilkay Öksüz, Daniel Rueckert, Reza Razavi, Andrew P. King
2019	J	`jnl`	Automatic CNN-based detection of cardiac MR motion artefacts using k-space data augmentation and curriculum learning. Medical Image Anal. Ilkay Öksüz, Bram Ruijsink, Esther Puyol-Antón, James R. Clough, Gastão Cruz, Aurélien Bustin, Claudia Prieto, René M. Botnar, Daniel Rueckert, Julia A. Schnabel, Andrew P. King
2019	J	`jnl`	Deep Learning Based Detection and Correction of Cardiac MR Motion Artefacts During Reconstruction for High-Quality Segmentation. CoRR Ilkay Öksüz, James R. Clough, Bram Ruijsink, Esther Puyol-Antón, Aurélien Bustin, Gastão Cruz, Claudia Prieto, Andrew P. King, Julia A. Schnabel
2019	J	`jnl`	Detection and Correction of Cardiac MR Motion Artefacts during Reconstruction from K-space. CoRR Ilkay Öksüz, James R. Clough, Bram Ruijsink, Esther Puyol-Antón, Aurélien Bustin, Gastão Cruz, Claudia Prieto, Daniel Rueckert, Andrew P. King, Julia A. Schnabel
2019	—	`conf`	Detection and Correction of Cardiac MRI Motion Artefacts During Reconstruction from k-space. MICCAI (4) Ilkay Öksüz, James R. Clough, Bram Ruijsink, Esther Puyol-Antón, Aurélien Bustin, Gastão Cruz, Claudia Prieto, Daniel Rueckert, Andrew P. King, Julia A. Schnabel
2019	—	`conf`	Explicit Topological Priors for Deep-Learning Based Image Segmentation Using Persistent Homology. IPMI James R. Clough, Ilkay Öksüz, Nicholas Byrne, Julia A. Schnabel, Andrew P. King
2019	J	`jnl`	Explicit topological priors for deep-learning based image segmentation using persistent homology. CoRR James R. Clough, Ilkay Öksüz, Nicholas Byrne, Julia A. Schnabel, Andrew P. King
2019	—	`conf`	Global and Local Interpretability for Cardiac MRI Classification. MICCAI (4) James R. Clough, Ilkay Öksüz, Esther Puyol-Antón, Bram Ruijsink, Andrew P. King, Julia A. Schnabel
2019	J	`jnl`	Global and Local Interpretability for Cardiac MRI Classification. CoRR James R. Clough, Ilkay Öksüz, Esther Puyol-Antón, Bram Ruijsink, Andrew P. King, Julia A. Schnabel
2019	—	`conf`	High-quality segmentation of low quality cardiac MR images using k-space artefact correction. MIDL Ilkay Öksüz, James R. Clough, Wenjia Bai, Bram Ruijsink, Esther Puyol-Antón, Gastão Cruz, Claudia Prieto, Andrew P. King, Julia A. Schnabel
2019	—	`conf`	Image Reconstruction in a Manifold of Image Patches: Application to Whole-Fetus Ultrasound Imaging. MLMIR@MICCAI Alberto Gómez, Veronika A. Zimmer, Nicolas Toussaint, Robert Wright, James R. Clough, Bishesh Khanal, Milou P. M. van Poppel, Emily Skelton, Jackie Matthews, Julia A. Schnabel
2019	—	`conf`	Magnetic Resonance Fingerprinting Using Recurrent Neural Networks. ISBI Ilkay Öksüz, Gastão Cruz, James R. Clough, Aurélien Bustin, Nicolo Fuin, René M. Botnar, Claudia Prieto, Andrew P. King, Julia A. Schnabel
2019	—	`conf`	Mechanically Powered Motion Imaging Phantoms: Proof of Concept. EMBC Alberto Gómez, Cornelia Schmitz, Markus Henningsson, James Housden, Yohan Noh, Veronika A. Zimmer, James R. Clough, Ilkay Öksüz, Nicolas Toussaint, Andrew P. King, Julia A. Schnabel
2019	J	`jnl`	Mechanically Powered Motion Imaging Phantoms: Proof of Concept. CoRR Alberto Gómez, Cornelia Schmitz, Markus Henningsson, James Housden, Yohan Noh, Veronika A. Zimmer, James R. Clough, Ilkay Öksüz, Nicolas Toussaint, Andrew P. King, Julia A. Schnabel
2019	—	`conf`	Pseudo-normal PET Synthesis with Generative Adversarial Networks for Localising Hypometabolism in Epilepsies. SASHIMI@MICCAI Siti Nurbaya Yaakub, Colm J. McGinnity, James R. Clough, Eric Kerfoot, Nadine Girard, Eric Guedj, Alexander Hammers
2019	—	`conf`	Self-supervised Recurrent Neural Network for 4D Abdominal and In-utero MR Imaging. MLMIR@MICCAI Tong Zhang, Laurence H. Jackson, Alena Uus, James R. Clough, Lisa Story, Mary A. Rutherford, Joseph V. Hajnal, Maria Deprez
2019	J	`jnl`	Self-supervised Recurrent Neural Network for 4D Abdominal and In-utero MR Imaging. CoRR Tong Zhang, Laurence H. Jackson, Alena Uus, James R. Clough, Lisa Story, Mary A. Rutherford, Joseph V. Hajnal, Maria Deprez
2019	—	`conf`	Topology-Preserving Augmentation for CNN-Based Segmentation of Congenital Heart Defects from 3D Paediatric CMR. SUSI/PIPPI@MICCAI Nick Byrne, James R. Clough, Isra Valverde, Giovanni Montana, Andrew P. King
2019	J	`jnl`	Topology-preserving augmentation for CNN-based segmentation of congenital heart defects from 3D paediatric CMR. CoRR Nick Byrne, James R. Clough, Isra Valverde, Giovanni Montana, Andrew P. King
2019	J	`jnl`	dAUTOMAP: decomposing AUTOMAP to achieve scalability and enhance performance. CoRR Jo Schlemper, Ilkay Öksüz, James R. Clough, Jinming Duan, Andrew P. King, Julia A. Schnabel, Joseph V. Hajnal, Daniel Rueckert
2018	—	`conf`	Automated CNN-Based Reconstruction of Short-Axis Cardiac MR Sequence from Real-Time Image Data. RAMBO+BIA+TIA@MICCAI Eric Kerfoot, Esther Puyol-Antón, Bram Ruijsink, James R. Clough, Andrew P. King, Julia A. Schnabel
2018	J	`jnl`	Automatic CNN-based detection of cardiac MR motion artefacts using k-space data augmentation and curriculum learning. CoRR Ilkay Öksüz, Bram Ruijsink, Esther Puyol-Antón, James R. Clough, Gastão Cruz, Aurélien Bustin, Claudia Prieto, René M. Botnar, Daniel Rueckert, Julia A. Schnabel, Andrew P. King
2018	—	`conf`	Cardiac MR Motion Artefact Correction from K-space Using Deep Learning-Based Reconstruction. MLMIR@MICCAI Ilkay Öksüz, James R. Clough, Aurélien Bustin, Gastão Cruz, Claudia Prieto, René M. Botnar, Daniel Rueckert, Julia A. Schnabel, Andrew P. King
2018	—	`conf`	Evaluation of Strategies for PET Motion Correction - Manifold Learning vs. Deep Learning. MLCN/DLF/iMIMIC@MICCAI James R. Clough, Daniel R. Balfour, Claudia Prieto, Andrew J. Reader, Paul K. Marsden, Andrew P. King
2018	—	`conf`	Left-Ventricle Quantification Using Residual U-Net. STACOM@MICCAI Eric Kerfoot, James R. Clough, Ilkay Öksüz, Jack Lee, Andrew P. King, Julia A. Schnabel
2018	—	`conf`	MRI slice stacking using manifold alignment and wave kernel signatures. ISBI James R. Clough, Daniel R. Balfour, Paul K. Marsden, Claudia Prieto, Andrew J. Reader, Andrew P. King
2018	J	`jnl`	Magnetic Resonance Fingerprinting using Recurrent Neural Networks. CoRR Ilkay Öksüz, Gastão Cruz, James R. Clough, Aurélien Bustin, Nicolo Fuin, René M. Botnar, Claudia Prieto, Andrew P. King, Julia A. Schnabel
2018	—	`conf`	PET-MR respiratory signal estimation using semi-supervised manifold alignment. ISBI Daniel R. Balfour, James R. Clough, Xin Chen, Martin A. Belzunce, Claudia Prieto, Paul K. Marsden, Andrew J. Reader, Andrew P. King
2017	J	`jnl`	Neural Embeddings of Graphs in Hyperbolic Space. CoRR Benjamin Paul Chamberlain, James R. Clough, Marc Peter Deisenroth
2016	J	`jnl`	Embedding Graphs in Lorentzian Spacetime. CoRR James R. Clough, Tim S. Evans
2015	—	`conf`	Time & Citation Networks. ISSI James R. Clough, Tim S. Evans
2015	J	`jnl`	Time and Citation Networks. CoRR James R. Clough, Tim S. Evans
2015	J	`jnl`	Transitive reduction of citation networks. J. Complex Networks James R. Clough, Jamie Gollings, Tamar V. Loach, Tim S. Evans
2014	J	`jnl`	What is the dimension of citation space? CoRR James R. Clough, Tim S. Evans
2013	J	`jnl`	Transitive Reduction of Citation Networks. CoRR James R. Clough, Jamie Gollings, Tamar V. Loach, Tim S. Evans