James O. McInerney

15 papers B 1Journal 11Unranked 3
YearRankTypeTitle / Venue / Authors
2026 J jnl
PanForest: predicting genes in genomes using random forests.
Bioinform.
Alan J. S. Beavan, Maria Rosa Domingo-Sananes, James O. McInerney
2015 J jnl
Endosymbiotic origin and differential loss of eukaryotic genes.
Nat.
Chuan Ku, Shijulal Nelson-Sathi, Mayo Roettger, Filipa L. Sousa, Peter J. Lockhart, David Bryant, Einat Hazkani-Covo, James O. McInerney, Giddy Landan, William F. Martin
2015 J jnl
Evolution by Pervasive Gene Fusion in Antibiotic Resistance and Antibiotic Synthesizing Genes.
Comput.
Orla Coleman, Ruth Hogan, Nicole McGoldrick, Niamh Rudden, James O. McInerney
2007 J jnl
MultiPhyl: a high-throughput phylogenomics webserver using distributed computing.
Nucleic Acids Res.
Thomas M. Keane, Thomas J. Naughton, James O. McInerney
2007 J jnl
TOPD/FMTS: a new software to compare phylogenetic trees.
Bioinform.
Pere Puigbò, Santiago Garcia-Vallvé, James O. McInerney
2006 J jnl
Building Large Phylogenetic Trees on Coarse-Grained Parallel Machines.
Algorithmica
Thomas M. Keane, Andrew J. Page, Thomas J. Naughton, Simon A. A. Travers, James O. McInerney
2005 B conf
A High-Throughput Bioinformatics Distributed Computing Platform.
CBMS
Thomas M. Keane, Andrew J. Page, James O. McInerney, Thomas J. Naughton
2005 J jnl
Clann: investigating phylogenetic information through supertree analyses.
Bioinform.
C. J. Creevey, James O. McInerney
2005 J jnl
DPRml: distributed phylogeny reconstruction by maximum likelihood.
Bioinform.
Thomas M. Keane, Thomas J. Naughton, Simon A. A. Travers, James O. McInerney, Grace P. McCormack
2004 J jnl
Gene prediction using the Self-Organizing Map: automatic generation of multiple gene models.
BMC Bioinform.
Shaun Mahony, James O. McInerney, Terry J. Smith, Aaron Golden
2003 — conf
A New Approach to Gene Prediction Using the Self-Organizing Map.
CSB
Shaun Mahony, Terry J. Smith, James O. McInerney, Aaron Golden
2003 J jnl
CRANN: detecting adaptive evolution in protein-coding DNA sequences.
Bioinform.
C. J. Creevey, James O. McInerney
2002 — conf
Distributed Java Platform with Programmable MIMD Capabilities.
FIDJI
Thomas M. Keane, Richard Allen, Thomas J. Naughton, James O. McInerney, John Waldron
2002 — conf
Distributed computing for DNA analysis.
PPPJ/IRE
Thomas M. Keane, Richard Allen, Thomas J. Naughton, James O. McInerney, John Waldron
1998 J jnl
GCUA: general codon usage analysis.
Bioinform.
James O. McInerney