James E. Crowe Jr.

11 papers C 1Journal 10
YearRankTypeTitle / Venue / Authors
2022 J jnl
Computational epitope mapping of class I fusion proteins using low complexity supervised learning methods.
PLoS Comput. Biol.
Marion F. S. Fischer, James E. Crowe Jr., Jens Meiler
2021 J jnl
ClonoMatch: a tool for identifying homologous immunoglobulin and T-cell receptor sequences in large databases.
Bioinform.
Taylor Jones, Samuel B. Day, Luke Myers, James E. Crowe Jr., Cinque S. Soto
2020 J jnl
Multi-state design of flexible proteins predicts sequences optimal for conformational change.
PLoS Comput. Biol.
Marion F. Sauer, Alexander M. Sevy, James E. Crowe Jr., Jens Meiler
2020 J jnl
PyIR: a scalable wrapper for processing billions of immunoglobulin and T cell receptor sequences using IgBLAST.
BMC Bioinform.
Cinque S. Soto, Jessica A. Finn, Jordan R. Willis, Samuel B. Day, Robert S. Sinkovits, Taylor Jones, Samuel Schmitz, Jens Meiler, Andre Branchizio, James E. Crowe Jr.
2019 J jnl
Immune repertoire fingerprinting by principal component analysis reveals shared features in subject groups with common exposures.
BMC Bioinform.
Alexander M. Sevy, Cinque S. Soto, Robin G. Bombardi, Jens Meiler, James E. Crowe Jr.
2018 J jnl
Integrating linear optimization with structural modeling to increase HIV neutralization breadth.
PLoS Comput. Biol.
Alexander M. Sevy, Swetasudha Panda, James E. Crowe Jr., Jens Meiler, Yevgeniy Vorobeychik
2015 J jnl
Design of Protein Multi-specificity Using an Independent Sequence Search Reduces the Barrier to Low Energy Sequences.
PLoS Comput. Biol.
Alexander M. Sevy, Tim M. Jacobs, James E. Crowe Jr., Jens Meiler
2014 J jnl
Proof of principle for epitope-focused vaccine design.
Nat.
Bruno E. Correia, John T. Bates, Rebecca J. Loomis, Gretchen Baneyx, Chris Carrico, Joseph G. Jardine, Peter Rupert, Colin E. Correnti, Oleksandr Kalyuzhniy, Vinayak Vittal, Mary J. Connell, Eric Stevens, Alexandria Schroeter, Man Chen, Skye MacPherson, Andreia M. Serra, Yumiko Adachi, Margaret A. Holmes, Yuxing Li, Rachel E. Klevit, Barney S. Graham, Richard T. Wyatt, David Baker, Roland K. Strong, James E. Crowe Jr., Philip R. Johnson, William R. Schief
2013 J jnl
Human Germline Antibody Gene Segments Encode Polyspecific Antibodies.
PLoS Comput. Biol.
Jordan R. Willis, Bryan S. Briney, Samuel L. DeLuca, James E. Crowe Jr., Jens Meiler
2007 J jnl
Evaporative cooling feature selection for genotypic data involving interactions.
Bioinform.
Brett A. McKinney, David M. Reif, Bill C. White, James E. Crowe Jr., Jason H. Moore
2006 C conf
Feature Selection using a Random Forests Classifier for the Integrated Analysis of Multiple Data Types.
CIBCB
David M. Reif, Alison A. Motsinger, Brett A. McKinney, James E. Crowe Jr., Jason H. Moore