James E. Bray

11 papers Journal 10Unranked 1
YearRankTypeTitle / Venue / Authors
2022 — conf
Visual Analytics Exploration of PubMLST Meningitis Genomic Data.
BIBM
Margaret J. Varga, Holly B. Bratcher, Keith A. Jolley, Odile B. Harrison, James E. Bray, Martin C. J. Maiden
2017 J jnl
A RESTful application programming interface for the PubMLST molecular typing and genome databases.
Database J. Biol. Databases Curation
Keith A. Jolley, James E. Bray, Martin C. J. Maiden
2017 J jnl
Diversity and distribution of nuclease bacteriocins in bacterial genomes revealed using Hidden Markov Models.
PLoS Comput. Biol.
Connor Sharp, James E. Bray, Nicholas G. Housden, Martin C. J. Maiden, Colin Kleanthous
2014 J jnl
Defining the Estimated Core Genome of Bacterial Populations Using a Bayesian Decision Model.
PLoS Comput. Biol.
Andries J. van Tonder, Shilan Mistry, James E. Bray, Dorothea M. C. Hill, Alison J. Cody, Chris L. Farmer, Keith P. Klugman, Anne von Gottberg, Stephen D. Bentley, Julian Parkhill, Keith A. Jolley, Martin C. J. Maiden, Angela B. Brueggemann
2014 J jnl
TypOn: the microbial typing ontology.
J. Biomed. Semant.
Cátia Vaz, Alexandre P. Francisco, Mickael Silva, Keith A. Jolley, James E. Bray, Hannes Pouseele, Jörg Rothgänger, Mário Ramirez, João A. Carriço
2004 J jnl
A practical and robust sequence search strategy for structural genomics target selection.
Bioinform.
James E. Bray, Russell L. Marsden, Stuart C. G. Rison, Alexei Savchenko, Aled M. Edwards, Janet M. Thornton, Christine A. Orengo
2003 J jnl
Gene3D: structural assignments for the biologist and bioinformaticist alike.
Nucleic Acids Res.
Daniel W. A. Buchan, Stuart C. G. Rison, James E. Bray, David A. Lee, Frances M. G. Pearl, Janet M. Thornton, Christine A. Orengo
2003 J jnl
The CATH database: an extended protein family resource for structural and functional genomics.
Nucleic Acids Res.
Frances M. G. Pearl, C. F. Bennett, James E. Bray, Andrew P. Harrison, Nigel J. Martin, Adrian J. Shepherd, Ian Sillitoe, Janet M. Thornton, Christine A. Orengo
2001 J jnl
A rapid classification protocol for the CATH Domain Database to support structural genomics.
Nucleic Acids Res.
Frances M. G. Pearl, Nigel J. Martin, James E. Bray, Daniel W. A. Buchan, Andrew P. Harrison, David A. Lee, Gabrielle A. Reeves, Adrian J. Shepherd, Ian Sillitoe, Annabel E. Todd, Janet M. Thornton, Christine A. Orengo
2000 J jnl
Assigning genomic sequences to CATH.
Nucleic Acids Res.
Frances M. G. Pearl, David A. Lee, James E. Bray, Ian Sillitoe, Annabel E. Todd, Andrew P. Harrison, Janet M. Thornton, Christine A. Orengo
1999 J jnl
The CATH Database provides insights into protein structure/function relationships.
Nucleic Acids Res.
Christine A. Orengo, Frances M. G. Pearl, James E. Bray, Annabel E. Todd, A. C. Martin, Loredana Lo Conte, Janet M. Thornton