James Burgess

28 papers A* 7Journal 16Unranked 5
YearRankTypeTitle / Venue / Authors
2026 J jnl
CoRR
James Burgess, Rameen Abdal, Dan Stoddart, Sergey Tulyakov, Serena Yeung-Levy, Kuan-Chieh Jackson Wang
2026 conf
EACL (Volume 1: Long Papers)
James Burgess, Jan N. Hansen, Duo Peng, Yuhui Zhang, Alejandro Lozano, Min Woo Sun, Emma Lundberg, Serena Yeung-Levy
2026 J jnl
CoRR
James Burgess, Jan N. Hansen, Duo Peng, Yuhui Zhang, Alejandro Lozano, Min Woo Sun, Emma Lundberg, Serena Yeung-Levy
2026 J jnl
CoRR
Rameen Abdal, James Burgess, Sergey Tulyakov, Kuan-Chieh Jackson Wang
2025 J jnl
CoRR
Alejandro Lozano, Min Woo Sun, James Burgess, Jeffrey J. Nirschl, Christopher Polzak, Yuhui Zhang, Liangyu Chen, Jeffrey Gu, Ivan Lopez, Josiah Aklilu, Anita Rau, Austin Wolfgang Katzer, Collin Chiu, Orr Zohar, Xiaohan Wang, Alfred Seunghoon Song, Chia-Chun Chiang, Robert Tibshirani, Serena Yeung-Levy
2025 A* conf
CVPR
Yuhui Zhang, Yuchang Su, Yiming Liu, Xiaohan Wang, James Burgess, Elaine Sui, Chenyu Wang, Josiah Aklilu, Alejandro Lozano, Anjiang Wei, Ludwig Schmidt, Serena Yeung-Levy
2025 J jnl
CoRR
Yuhui Zhang, Yuchang Su, Yiming Liu, Xiaohan Wang, James Burgess, Elaine Sui, Chenyu Wang, Josiah Aklilu, Alejandro Lozano, Anjiang Wei, Ludwig Schmidt, Serena Yeung-Levy
2025 A* conf
CVPR
Alejandro Lozano, Min Woo Sun, James Burgess, Liangyu Chen, Jeffrey J. Nirschl, Jeffrey Gu, Ivan Lopez, Josiah Aklilu, Anita Rau, Austin Wolfgang Katzer, Yuhui Zhang, Collin Chiu, Xiaohan Wang, Alfred Seunghoon Song, Robert Tibshirani, Serena Yeung-Levy
2025 J jnl
CoRR
Alejandro Lozano, Min Woo Sun, James Burgess, Liangyu Chen, Jeffrey J. Nirschl, Jeffrey Gu, Ivan Lopez, Josiah Aklilu, Austin Wolfgang Katzer, Collin Chiu, Anita Rau, Xiaohan Wang, Yuhui Zhang, Alfred Seunghoon Song, Robert Tibshirani, Serena Yeung-Levy
2025 J jnl
CoRR
Christopher Polzak, Alejandro Lozano, Min Woo Sun, James Burgess, Yuhui Zhang, Kevin Wu, Serena Yeung-Levy
2025 J jnl
CoRR
Yuhui Zhang, Yuchang Su, Chenyu Wang, Tianhong Li, Zoe Wefers, Jeffrey J. Nirschl, James Burgess, Daisy Ding, Alejandro Lozano, Emma Lundberg, Serena Yeung-Levy
2025 A* conf
ICML
Yuhui Zhang, Yuchang Su, Chenyu Wang, Tianhong Li, Zoe Wefers, Jeffrey J. Nirschl, James Burgess, Daisy Ding, Alejandro Lozano, Emma Lundberg, Serena Yeung-Levy
2025 A* conf
CVPR
James Burgess, Jeffrey J. Nirschl, Laura Bravo-Sánchez, Alejandro Lozano, Sanket Rajan Gupte, Jesus G. Galaz-Montoya, Yuhui Zhang, Yuchang Su, Disha Bhowmik, Zachary Coman, Sarina M. Hasan, Alexandra Johannesson, William D. Leineweber, Malvika G. Nair, Ridhi Yarlagadda, Connor Zuraski, Wah Chiu, Sarah Cohen, Jan N. Hansen, Manuel D. Leonetti, Chad Liu, Emma Lundberg, Serena Yeung-Levy
2025 J jnl
CoRR
James Burgess, Jeffrey J. Nirschl, Laura Bravo-Sánchez, Alejandro Lozano, Sanket Rajan Gupte, Jesus G. Galaz-Montoya, Yuhui Zhang, Yuchang Su, Disha Bhowmik, Zachary Coman, Sarina M. Hasan, Alexandra Johannesson, William D. Leineweber, Malvika G. Nair, Ridhi Yarlagadda, Connor Zuraski, Wah Chiu, Sarah Cohen, Jan N. Hansen, Manuel D. Leonetti, Chad Liu, Emma Lundberg, Serena Yeung-Levy
2025 J jnl
CoRR
Min Woo Sun, Alejandro Lozano, Javier Gamazo Tejero, Vishwesh Nath, Xiao Xiao Sun, James Burgess, Yuhui Zhang, Kun Yuan, Robert Tibshirani, Sean Huver, Serena Yeung-Levy
2025 J jnl
CoRR
Jyotirmai Singh, Samar Khanna, James Burgess
2025 conf
MLHC
Liangyu Chen, James Burgess, Jeffrey J. Nirschl, Orr Zohar, Serena Yeung-Levy
2025 J jnl
CoRR
Liangyu Chen, James Burgess, Jeffrey J. Nirschl, Orr Zohar, Serena Yeung-Levy
2025 A* conf
ICLR
James Burgess, Xiaohan Wang, Yuhui Zhang, Anita Rau, Alejandro Lozano, Lisa Dunlap, Trevor Darrell, Serena Yeung-Levy
2025 J jnl
CoRR
James Burgess, Xiaohan Wang, Yuhui Zhang, Anita Rau, Alejandro Lozano, Lisa Dunlap, Trevor Darrell, Serena Yeung-Levy
2024 A* conf
NeurIPS
Alejandro Lozano, Jeffrey J. Nirschl, James Burgess, Sanket Rajan Gupte, Yuhui Zhang, Alyssa Unell, Serena Yeung
2024 conf
ECCV (64)
James Burgess, Kuan-Chieh Wang, Serena Yeung-Levy
2024 J jnl
CoRR
Alejandro Lozano, Jeffrey J. Nirschl, James Burgess, Sanket Rajan Gupte, Yuhui Zhang, Alyssa Unell, Serena Yeung-Levy
2023 J jnl
CoRR
James Burgess, Kuan-Chieh Wang, Serena Yeung
2021 J jnl
J. Open Source Softw.
James Burgess, Francesca Capel
2004 conf
ISBI
Juan R. Cebral, Marcelo Adrián Castro, James Burgess, Christopher M. Putman
2004 conf
CARS
Neil D. Glossop, Kevin Cleary, James Burgess, Gabriela Corral
2003 A* conf
ICRA
Todd D. Murphey, Joel W. Burdick, James Burgess, Andrew Homyk
tests/integration/test_pe_extractor.py
← Index tests/integration/test_pe_extractor.py python
"""
Integration tests for the PEExtractor base class.
"""
import pytest
from unittest.mock import Mock, patch, MagicMock

pytestmark = [pytest.mark.integration, pytest.mark.pe]


class TestPEExtractorInitialization:
    """Tests for PEExtractor initialization."""

    def test_pe_extractor_with_valid_pe(self, pe_binary_path, mock_logger):
        """Test PEExtractor initialization with valid PE file."""
        from redb.extractors.pe_extractors.pe_features import PEFeaturesExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEFeaturesExtractor(pe_binary_path, mock_logger)

            assert extractor.pe is not None
            assert extractor.filepath == pe_binary_path

    def test_pe_extractor_with_provided_pe_object(self, pe_binary_path, mock_logger, pe_object):
        """Test PEExtractor initialization with pre-existing PE object."""
        from redb.extractors.pe_extractors.pe_features import PEFeaturesExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEFeaturesExtractor(pe_binary_path, mock_logger, pe=pe_object)

            # Should use the provided PE object, not create a new one
            assert extractor.pe is pe_object

    def test_pe_extractor_with_invalid_file(self, elf_binary_path, mock_logger):
        """Test PEExtractor initialization with non-PE file."""
        from redb.extractors.pe_extractors.pe_features import PEFeaturesExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEFeaturesExtractor(elf_binary_path, mock_logger)

            # Should return None for pe when file is not a valid PE
            assert extractor.pe is None
            # Logger should have recorded an error
            assert mock_logger.error.called


class TestPEExtractorMethods:
    """Tests for PEExtractor helper methods."""

    def test_check_dotnet_true(self, pe_binary_path, mock_logger):
        """Test _check_dotnet returns True for .NET PE."""
        from redb.extractors.pe_extractors.pe_features import PEFeaturesExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEFeaturesExtractor(pe_binary_path, mock_logger)

            # The test PE file is a .NET binary
            if extractor.pe is not None:
                result = extractor._check_dotnet()
                # d8637bdbcfc9112fcb1f0167b398e771 is a .NET binary
                assert result is True

    def test_check_dotnet_false(self, elf_binary_path, mock_logger):
        """Test _check_dotnet returns False for non-PE file."""
        from redb.extractors.pe_extractors.pe_features import PEFeaturesExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEFeaturesExtractor(elf_binary_path, mock_logger)

            # Should return False when PE is None
            result = extractor._check_dotnet()
            assert result is False

    def test_is_signed_false(self, pe_binary_path, mock_logger):
        """Test _is_signed method."""
        from redb.extractors.pe_extractors.pe_features import PEFeaturesExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEFeaturesExtractor(pe_binary_path, mock_logger)

            if extractor.pe is not None:
                result = extractor._is_signed()
                # Result depends on the actual binary
                assert isinstance(result, bool)

    def test_has_overlay(self, pe_binary_path, mock_logger):
        """Test _has_overlay method."""
        from redb.extractors.pe_extractors.pe_features import PEFeaturesExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEFeaturesExtractor(pe_binary_path, mock_logger)

            if extractor.pe is not None:
                result = extractor._has_overlay()
                assert isinstance(result, bool)


class TestGeneratePEFileObject:
    """Tests for _generate_pefile_object method."""

    def test_generate_pefile_object_valid(self, pe_binary_path, mock_logger):
        """Test _generate_pefile_object with valid PE file."""
        from redb.extractors.pe_extractors.pe_features import PEFeaturesExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEFeaturesExtractor(pe_binary_path, mock_logger)

            # The PE object should be created successfully
            assert extractor.pe is not None

    def test_generate_pefile_object_invalid(self, temp_text_file, mock_logger):
        """Test _generate_pefile_object with invalid file."""
        from redb.extractors.pe_extractors.pe_features import PEFeaturesExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEFeaturesExtractor(temp_text_file, mock_logger)

            # Should return None for invalid PE
            assert extractor.pe is None


class TestGenerateDotNetFileObject:
    """Tests for _generate_dotnetfile_object method."""

    def test_generate_dotnetfile_object_valid(self, pe_binary_path, mock_logger):
        """Test _generate_dotnetfile_object with .NET PE file."""
        from redb.extractors.pe_extractors.pe_dotnet import PEDotNetExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEDotNetExtractor(pe_binary_path, mock_logger)

            if extractor.pe is not None and extractor._check_dotnet():
                dotnet, error = extractor._generate_dotnetfile_object()
                # Should create dotnet object for .NET PE
                assert dotnet is not None
                assert error is None

    def test_generate_dotnetfile_object_invalid(self, elf_binary_path, mock_logger):
        """Test _generate_dotnetfile_object with non-.NET file."""
        from redb.extractors.pe_extractors.pe_dotnet import PEDotNetExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEDotNetExtractor(elf_binary_path, mock_logger)

            dotnet, error = extractor._generate_dotnetfile_object()
            # Should return error for non-.NET file
            assert dotnet is None
            assert error is not None


class TestPEExtractorTag:
    """Tests for tag method in PE extractors."""

    def test_pe_features_tag(self, pe_binary_path, mock_logger):
        """Test that PEFeaturesExtractor returns correct tag."""
        from redb.extractors.pe_extractors.pe_features import PEFeaturesExtractor
        from redb.extractors.enum import Tag

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEFeaturesExtractor(pe_binary_path, mock_logger)
            assert extractor.tag() == Tag.PE_FEATURES.value

    def test_pe_import_tag(self, pe_binary_path, mock_logger):
        """Test that PEImportExtractor returns correct tag."""
        from redb.extractors.pe_extractors.pe_imports import PEImportExtractor
        from redb.extractors.enum import Tag

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEImportExtractor(pe_binary_path, mock_logger)
            assert extractor.tag() == Tag.PE_IMPORT.value

    def test_pe_section_tag(self, pe_binary_path, mock_logger):
        """Test that PESectionExtractor returns correct tag."""
        from redb.extractors.pe_extractors.pe_sections import PESectionExtractor
        from redb.extractors.enum import Tag

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PESectionExtractor(pe_binary_path, mock_logger)
            assert extractor.tag() == Tag.PE_SECTION.value


class TestPEExtractorClickHouseTable:
    """Tests for get_clickhouse_table method in PE extractors."""

    def test_pe_features_clickhouse_table(self, pe_binary_path, mock_logger):
        """Test that PEFeaturesExtractor returns correct ClickHouse table name."""
        from redb.extractors.pe_extractors.pe_features import PEFeaturesExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEFeaturesExtractor(pe_binary_path, mock_logger)
            assert extractor.get_clickhouse_table() == "redb_pe_features"

    def test_pe_import_clickhouse_table(self, pe_binary_path, mock_logger):
        """Test that PEImportExtractor returns correct ClickHouse table name."""
        from redb.extractors.pe_extractors.pe_imports import PEImportExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEImportExtractor(pe_binary_path, mock_logger)
            assert extractor.get_clickhouse_table() == "redb_pe_imports"

    def test_pe_section_clickhouse_table(self, pe_binary_path, mock_logger):
        """Test that PESectionExtractor returns correct ClickHouse table name."""
        from redb.extractors.pe_extractors.pe_sections import PESectionExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PESectionExtractor(pe_binary_path, mock_logger)
            assert extractor.get_clickhouse_table() == "redb_pe_sections"


class TestPEExtractorPrepareExportData:
    """Tests for prepare_export_data method in PE extractors."""

    def test_pe_features_prepare_export_elasticsearch(self, pe_binary_path, mock_logger):
        """Test prepare_export_data for Elasticsearch."""
        from redb.extractors.pe_extractors.pe_features import PEFeaturesExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEFeaturesExtractor(pe_binary_path, mock_logger)

            if extractor.pe is not None:
                # First extract
                extractor.extract()
                result = extractor.prepare_export_data("ElasticsearchExporter")
                # Should return the pe_features dataclass
                assert result is extractor.pe_features

    def test_pe_features_prepare_export_clickhouse(self, pe_binary_path, mock_logger):
        """Test prepare_export_data for ClickHouse."""
        from redb.extractors.pe_extractors.pe_features import PEFeaturesExtractor

        with patch('redb.settings.ELASTIC_BINARIES_COLLECTION', 'test'):
            extractor = PEFeaturesExtractor(pe_binary_path, mock_logger)

            if extractor.pe is not None:
                # First extract
                extractor.extract()
                result = extractor.prepare_export_data("ClickHouseExporter")

                # Should return tuple of (data, column_names, column_type_names)
                assert isinstance(result, tuple)
                assert len(result) == 3
                data, column_names, column_type_names = result
                assert isinstance(data, list)
                assert isinstance(column_names, list)
                assert isinstance(column_type_names, list)
                # Column names and types should match in length
                assert len(column_names) == len(column_type_names)