James A. Foster

65 papers A 13B 6C 1Misc 7Journal 23Unranked 13
YearRankTypeTitle / Venue / Authors
2022 J jnl
No-boundary thinking: a viable solution to ethical data-driven AI in precision medicine.
AI Ethics
Tayo Obafemi-Ajayi, Andy D. Perkins, Bindu Nanduri, Donald C. Wunsch II, James A. Foster, Joan Peckham
2021 Misc conf
Feasibility of the vaccine development for SARS-CoV-2 and other viruses using the shell disorder analysis.
PSB
Gerard Kian-Meng Goh, A. Keith Dunker, James A. Foster, Vladimir N. Uversky
2017 — conf
SeqyClean: A Pipeline for High-throughput Sequence Data Preprocessing.
BCB
Ilya Y. Zhbannikov, Samuel S. Hunter, James A. Foster, Matthew L. Settles
2017 J jnl
Taking "biology" just seriously enough: Commentary on "On the Mapping of Genotype to Phenotype in Evolutionary Algorithms" by Peter A. Whigham, Grant Dick, and James Maclaurin.
Genet. Program. Evolvable Mach.
James A. Foster
2016 Misc conf
Computational Approaches to Study Microbes and Microbiomes.
PSB
Casey S. Greene, James A. Foster, Bruce A. Stanton, Deborah A. Hogan, Yana Bromberg
2016 J jnl
Defining and simulating open-ended novelty: requirements, guidelines, and challenges.
Theory Biosci.
Wolfgang Banzhaf, Bert Baumgaertner, Guillaume Beslon, René Doursat, James A. Foster, Barry McMullin, Vinícius Veloso de Melo, Thomas Miconi, Lee Spector, Susan Stepney, Roger White
2015 J jnl
Machine learning classifiers provide insight into the relationship between microbial communities and bacterial vaginosis.
BioData Min.
Daniel Beck, James A. Foster
2015 J jnl
MetAmp: combining amplicon data from multiple markers for OTU analysis.
Bioinform.
Ilya Y. Zhbannikov, James A. Foster
2015 J jnl
Seed: a user-friendly tool for exploring and visualizing microbial community data.
Bioinform.
Daniel Beck, Christopher Dennis, James A. Foster
2014 Misc conf
Applying machine learning techniques in detecting Bacterial Vaginosis.
ICMLC
Yolanda S. Baker, Rajeev Agrawal, James A. Foster, Daniel Beck, Gerry V. Dozier
2014 Misc conf
Building the Next Generation of Quantitative Biologists.
Pacific Symposium on Biocomputing
Kristine A. Pattin, Anna C. Greene, Russ B. Altman, Lawrence E. Hunter, David A. Ross, James A. Foster, Jason H. Moore
2014 — conf
Detecting bacterial vaginosis using machine learning.
ACM Southeast Regional Conference
Yolanda S. Baker, Rajeev Agrawal, James A. Foster, Daniel Beck, Gerry V. Dozier
2014 A conf
GA-based selection of vaginal microbiome features associated with bacterial vaginosis.
GECCO
Joi Carter, Daniel Beck, Henry Williams, Gerry V. Dozier, James A. Foster
2013 J jnl
Introduction to special section: Best of EuroGP/EvoBio.
Genet. Program. Evolvable Mach.
James A. Foster
2013 — conf
decisivatoR: an R infrastructure package that addresses the problem of phylogenetic decisiveness.
BCB
Ilya Y. Zhbannikov, Joseph W. Brown, James A. Foster
2012 Misc conf
Estimating Population Diversity with Unreliable Low Frequency Counts.
Pacific Symposium on Biocomputing
John Bunge, Dankmar Böhning, Heather K. Allen, James A. Foster
2012 J jnl
Estimating population diversity with CatchAll.
Bioinform.
John Bunge, Linda Woodard, Dankmar Böhning, James A. Foster, Sean Connolly, Heather K. Allen
2012 J jnl
Guest editorial: special issue on selected papers from the European conference on genetic programming.
Genet. Program. Evolvable Mach.
Sara Silva, James A. Foster
2012 J jnl
Measuring the microbiome: perspectives on advances in DNA-based techniques for exploring microbial life.
Briefings Bioinform.
James A. Foster, John Bunge, Jack A. Gilbert, Jason H. Moore
2012 Misc conf
Session introduction.
Pacific Symposium on Biocomputing
James A. Foster, Jason H. Moore, Jack A. Gilbert, John Bunge
2012 J jnl
mcaGUI: microbial community analysis R-Graphical User Interface (GUI).
Bioinform.
Wade K. Copeland, Vandhana Krishnan, Daniel Beck, Matt Settles, James A. Foster, Kyu-Chul Cho, Mitch Day, Roxana Hickey, Ursel M. E. Schütte, Xia Zhou, Christopher J. Williams, Larry J. Forney, Zaid Abdo
2011 J jnl
Computing with bacterial constituents, cells and populations: from bioputing to bactoputing.
Theory Biosci.
Vic Norris, Abdallah Zemirline, Patrick Amar, Jean Nicolas Audinot, Pascal Ballet, Eshel Ben-Jacob, Gilles Bernot, Guillaume Beslon, Armelle Cabin, Eric Fanchon, Jean-Louis Giavitto, Nicolas Glade, Patrick Greussay, Yohann Grondin, James A. Foster, Guillaume Hutzler, Jürgen Jost, François Képès, Olivier Michel, Franck Molina, Jacqueline Signorini, Pasquale Stano, Alain R. Thierry
2011 B ed.
Genetic Programming - 14th European Conference, EuroGP 2011, Torino, Italy, April 27-29, 2011. Proceedings
EuroGP
Sara Silva, James A. Foster, Miguel Nicolau, Penousal Machado, Mario Giacobini
2011 J jnl
OTUbase: an R infrastructure package for operational taxonomic unit data.
Bioinform.
Daniel Beck, Matt Settles, James A. Foster
2011 Misc conf
Session Introduction.
Pacific Symposium on Biocomputing
James A. Foster, Jason H. Moore
2006 J jnl
Clearcut: a fast implementation of relaxed neighbor joining.
Bioinform.
Luke Sheneman, Jason Evans, James A. Foster
2006 A conf
Estimating the destructiveness of crossover on binary tree representations.
GECCO
Luke Sheneman, James A. Foster
2005 J jnl
Introduction.
Genet. Program. Evolvable Mach.
James A. Foster, Erick Cantú-Paz
2004 B conf
Co-evolving Faults to Improve the Fault Tolerance of Sorting Networks.
EuroGP
Michael L. Harrison, James A. Foster
2004 J jnl
Editorial Introduction.
Genet. Program. Evolvable Mach.
Wolfgang Banzhaf, James A. Foster
2004 — conf
Evolving Better Multiple Sequence Alignments.
GECCO (1)
Luke Sheneman, James A. Foster
2004 — ed.
Genetic and Evolutionary Computation - GECCO 2004, Genetic and Evolutionary Computation Conference, Seattle, WA, USA, June 26-30, 2004, Proceedings, Part I
GECCO (1)
Kalyanmoy Deb, Riccardo Poli, Wolfgang Banzhaf, Hans-Georg Beyer, Edmund K. Burke, Paul J. Darwen, Dipankar Dasgupta, Dario Floreano, James A. Foster, Mark Harman, Owen Holland, Pier Luca Lanzi, Lee Spector, Andrea Tettamanzi, Dirk Thierens, Andrew M. Tyrrell
2004 — ed.
Genetic and Evolutionary Computation - GECCO 2004, Genetic and Evolutionary Computation Conference, Seattle, WA, USA, June 26-30, 2004, Proceedings, Part II
GECCO (2)
Kalyanmoy Deb, Riccardo Poli, Wolfgang Banzhaf, Hans-Georg Beyer, Edmund K. Burke, Paul J. Darwen, Dipankar Dasgupta, Dario Floreano, James A. Foster, Mark Harman, Owen Holland, Pier Luca Lanzi, Lee Spector, Andrea Tettamanzi, Dirk Thierens, Andrew M. Tyrrell
2004 — conf
Improving the Survivability of a Simple Evolved Circuit through Co-evolution.
Evolvable Hardware
Michael L. Harrison, James A. Foster
2004 J jnl
Multiple Sequence Alignment with Evolutionary Computation.
Genet. Program. Evolvable Mach.
Conrad Shyu, Luke Sheneman, James A. Foster
2003 J jnl
Behavioral Diversity and a Probabilistically Optimal GP Ensemble.
Genet. Program. Evolvable Mach.
Kosuke Imamura, Terence Soule, Robert B. Heckendorn, James A. Foster
2003 A conf
Evolving Consensus Sequence for Multiple Sequence Alignment with a Genetic Algorithm.
GECCO
Conrad Shyu, James A. Foster
2003 A ed.
Genetic and Evolutionary Computation - GECCO 2003, Genetic and Evolutionary Computation Conference, Chicago, IL, USA, July 12-16, 2003. Proceedings, Part I
GECCO
Erick Cantú-Paz, James A. Foster, Kalyanmoy Deb, Lawrence Davis, Rajkumar Roy, Una-May O'Reilly, Hans-Georg Beyer, Russell K. Standish, Graham Kendall, Stewart W. Wilson, Mark Harman, Joachim Wegener, Dipankar Dasgupta, Mitchell A. Potter, Alan C. Schultz, Kathryn A. Dowsland, Natasa Jonoska, Julian F. Miller
2003 A ed.
Genetic and Evolutionary Computation - GECCO 2003, Genetic and Evolutionary Computation Conference, Chicago, IL, USA, July 12-16, 2003. Proceedings, Part II
GECCO
Erick Cantú-Paz, James A. Foster, Kalyanmoy Deb, Lawrence Davis, Rajkumar Roy, Una-May O'Reilly, Hans-Georg Beyer, Russell K. Standish, Graham Kendall, Stewart W. Wilson, Mark Harman, Joachim Wegener, Dipankar Dasgupta, Mitchell A. Potter, Alan C. Schultz, Kathryn A. Dowsland, Natasa Jonoska, Julian F. Miller
2003 A conf
Inherent Fault Tolerance in Evolved Sorting Networks.
GECCO
Rob Shepherd, James A. Foster
2002 A conf
A Genetic Algorithm-specific Test Of Random Generator Quality.
GECCO
Mark M. Meysenburg, Daniel Hoelting, Duane McElvain, James A. Foster
2002 A conf
Abstention Reduces Errors - decision Abstaining N-version Genetic Programming.
GECCO
Kosuke Imamura, Robert B. Heckendorn, Terence Soule, James A. Foster
2002 — conf
Electronic Polymerase Chain Reaction (EPCR) Search Algorithm.
CSB
Conrad Shyu, James A. Foster, Larry J. Forney
2002 B ed.
Genetic Programming, 5th European Conference, EuroGP 2002, Kinsale, Ireland, April 3-5, 2002, Proceedings
EuroGP
James A. Foster, Evelyne Lutton, Julian F. Miller, Conor Ryan, Andrea Tettamanzi
2002 A conf
How Random Generator Quality Impacts GA Performance.
GECCO
Mark M. Meysenburg, Daniel Hoelting, Duane McElvain, James A. Foster
2002 — conf
MiCA: Web-Based Computational Tools for the Analysis of Microbial Community Structure and Compisition Based on T-RFLP of 16S rRNA Gene.
CSB
Conrad Shyu, James A. Foster, K. X. Liao, S. J. Bent, K. Sale, Larry J. Forney, Terence Soule
2002 B conf
N-Version Genetic Programming via Fault Masking.
EuroGP
Kosuke Imamura, Robert B. Heckendorn, Terence Soule, James A. Foster
2001 B conf
Computational Complexity, Genetic Programming, and Implications.
EuroGP
Bart Rylander, Terence Soule, James A. Foster
2001 J jnl
Review: Discipulus: A Commercial Genetic Programming System.
Genet. Program. Evolvable Mach.
James A. Foster
2000 A conf
Evolving Molecules for Drug Design Using Genetic Algorithms via Molecular Trees.
GECCO
Gerard Kian-Meng Goh, James A. Foster
2000 A conf
GA Hard Problems.
GECCO
Bart Rylander, James A. Foster
2000 A conf
Quantum Genetic Algorithms.
GECCO
Bart Rylander, Terence Soule, James A. Foster, Jim Alves-Foss
2000 — conf
Size versus Robustness in Evolved Sorting Networks: Is Bigger Better?
Evolvable Hardware
Jason Masner, John Cavalieri, James F. Frenzel, James A. Foster
2000 — conf
Special Purpose Image Convolution with Evolvable Hardware.
EvoWorkshops
Joe Dumoulin, James A. Foster, James F. Frenzel, Steve McGrew
2000 J jnl
The 2-Pebbling Property and a Conjecture of Graham's.
Graphs Comb.
Hunter S. Snevily, James A. Foster
2000 — conf
The Test Vector Problem and Limitations to Evolving Digital Circuits.
Evolvable Hardware
Kosuke Imamura, James A. Foster, Axel W. Krings
1999 — conf
Representation and Robustness for Evolved Sorting Networks.
Evolvable Hardware
Jason Masner, John Cavalieri, James F. Frenzel, James A. Foster
1999 A conf
Towards Byte Code Genetic Programming.
GECCO
Brad Harvey, James A. Foster, Deborah A. Frincke
1999 B conf
Using chaos in genetic algorithms.
CEC
John Determan, James A. Foster
1998 J jnl
Effects of Code Growth and Parsimony Pressure on Populations in Genetic Programming.
Evol. Comput.
Terence Soule, James A. Foster
1997 — conf
Genetic Algorithm Hardness Measures Applied to the Maximum Clique Problem.
ICGA
Terence Soule, James A. Foster
1997 — conf
The Quality of Pseudo-Random Number Generations and Simple Genetic Algorithm Performance.
ICGA
Mark M. Meysenburg, James A. Foster
1995 J jnl
(In)Formal Methods: Teaching Program Derivation Via the Moore Method.
Comput. Sci. Educ.
James A. Foster, Michael Barnett, Karen Van Houten, Luke Sheneman
1993 J jnl
The Generic Oracle Hypothesis is False.
Inf. Process. Lett.
James A. Foster
1992 C conf
The Generic Oracle Hypothesis Fails.
ICCI
James A. Foster