Jaime I. Dávila

19 papers B 1C 2Misc 1Journal 7Unranked 5
YearRankTypeTitle / Venue / Authors
2023 — conf
Cancer and Tissue Prediction Using Mutational Signatures in Highly Mutated Cancers.
ICCABS
Julia Cordes, Jaime I. Dávila
2023 J jnl
Excerno: Using Mutational Signatures in Sequencing Data to Filter False Variants Caused by Clinical Archival.
J. Comput. Biol.
Audrey Mitchell, Marco Ruiz, Soua Yang, Chen Wang, Jaime I. Dávila
2021 — conf
Excerno: Filtering Mutations Caused by the Clinical Archival Process in Sequencing Data.
ICCABS
Audrey Mitchell, Marco Ruiz, Soua Yang, Chen Wang, Jaime I. Dávila
2021 J jnl
Semi-Supervised Topological Analysis for Elucidating Hidden Structures in High-Dimensional Transcriptome Datasets.
IEEE ACM Trans. Comput. Biol. Bioinform.
Tianshu Feng, Jaime I. Dávila, Yuanhang Liu, Sangdi Lin, Shuai Huang, Chen Wang
2018 — ch.
Approximation Algorithms for the Primer Selection, PlantedMotif Search, and Related Problems.
Handbook of Approximation Algorithms and Metaheuristics (2)
Sudha Balla, Jaime I. Dávila, Marius Nicolae, Sanguthevar Rajasekaran
2017 — conf
Challenges of using RNA-seq in the clinical setting.
ICCABS
Jaime I. Dávila
2015 — conf
Bioinformatics Strategies for Identifying Regions of Epigenetic Deregulation Associated with Aberrant Transcript Splicing and RNA-editing.
BIOINFORMATICS
Mia D. Champion, Ryan A. Hlady, Huihuang Yan, Jared Evans, Jeff Nie, Jeong-Heon Lee, James M. Bogenberger, Kannabiran Nandakumar, Jaime I. Dávila, Raymond M. Moore, Asha A. Nair, Daniel R. O'Brien, Yuan-Xiao Zhu, K. Martin Kortüm, Tamas Ordog, Zhiguo Zhang, Richard W. Joseph, A. Keith Stewart, Jean-Pierre A. Kocher, Eric Jonasch, Keith D. Robertson, Raoul Tibes, Thai H. Ho
2014 J jnl
MAP-RSeq: Mayo Analysis Pipeline for RNA sequencing.
BMC Bioinform.
Krishna R. Kalari, Asha A. Nair, Jaysheel D. Bhavsar, Daniel R. O'Brien, Jaime I. Dávila, Matthew A. Bockol, Jinfu J. Nie, Xiaojia Tang, Saurabh Baheti, Jay B. Doughty, Sumit Middha, Hugues Sicotte, E. Aubrey Thompson, Yan W. Asmann, Jean-Pierre A. Kocher
2014 J jnl
RVboost: RNA-seq variants prioritization using a boosting method.
Bioinform.
Chen Wang, Jaime I. Dávila, Saurabh Baheti, Aditya Bhagwate, Xue Wang, Jean-Pierre A. Kocher, Susan L. Slager, Andrew L. Feldman, Anne J. Novak, James R. Cerhan, E. Aubrey Thompson, Yan W. Asmann
2007 — ch.
Approximation Algorithms for the Primer Selection, Planted Motif Search, and Related Problems.
Handbook of Approximation Algorithms and Metaheuristics
Sudha Balla, Jaime I. Dávila, Sanguthevar Rajasekaran
2007 C conf
Fast Algorithms for Selecting Specific siRNA in Complete mRNA Data.
WABI
Jaime I. Dávila, Sudha Balla, Sanguthevar Rajasekaran
2007 J jnl
Fast and Practical Algorithms for Planted (l, d) Motif Search.
IEEE ACM Trans. Comput. Biol. Bioinform.
Jaime I. Dávila, Sudha Balla, Sanguthevar Rajasekaran
2007 — ch.
Randomized Packet Routing, Selection, and Sorting on the POPS Network.
Handbook of Parallel Computing
Sanguthevar Rajasekaran, Jaime I. Dávila
2006 C conf
Extending Pattern Branching to Handle Challenging Instances.
BIBE
Jaime I. Dávila, Sanguthevar Rajasekaran
2006 Misc conf
Space and Time Efficient Algorithms for Planted Motif Search.
International Conference on Computational Science (2)
Jaime I. Dávila, Sudha Balla, Sanguthevar Rajasekaran
2005 J jnl
Packet routing and selection on the POPS network.
J. Parallel Distributed Comput.
Sanguthevar Rajasekaran, Jaime I. Dávila
2005 J jnl
Randomized Sorting On The Pops Network.
Int. J. Found. Comput. Sci.
Jaime I. Dávila, Sanguthevar Rajasekaran
2004 B conf
A Fundamental Problem in Computer and Communication.
ICPADS
Sanguthevar Rajasekaran, Jaime I. Dávila
2004 — conf
Randomized Sorting on the POPS Network.
PDCS
Jaime I. Dávila, Sanguthevar Rajasekaran