Jaebum Kim

27 papers B 1Journal 16Unranked 9
YearRankTypeTitle / Venue / Authors
2025 — conf
Alu as the Driver of CNV Formation: A Computational Approach to Reveal NAHR.
BigComp
Charyeong Heo, Nayoung Park, Jaebum Kim
2025 — conf
Assessing the impact of reference genomes on the quality of a reference-guided genome assembly.
BigComp
Suyeon Wy, Junyoung Kim, Mikang Sim, Daehong Kwon, Jaebum Kim
2022 J jnl
DLEB: a web application for building deep learning models in biological research.
Nucleic Acids Res.
Suyeon Wy, Daehong Kwon, Kisang Kwon, Jaebum Kim
2022 J jnl
msPIPE: a pipeline for the analysis and visualization of whole-genome bisulfite sequencing data.
BMC Bioinform.
Heesun Kim, Mikang Sim, Nayoung Park, Kisang Kwon, Junyoung Kim, Jaebum Kim
2020 J jnl
TAMA: improved metagenomic sequence classification through meta-analysis.
BMC Bioinform.
Mikang Sim, Jongin Lee, Daehwan Lee, Daehong Kwon, Jaebum Kim
2019 J jnl
GMASS: a novel measure for genome assembly structural similarity.
BMC Bioinform.
Daehong Kwon, Jongin Lee, Jaebum Kim
2018 J jnl
INTERSPIA: a web application for exploring the dynamics of protein-protein interactions among multiple species.
Nucleic Acids Res.
Daehong Kwon, Daehwan Lee, Juyeon Kim, Jongin Lee, Mikang Sim, Jaebum Kim
2018 J jnl
mySyntenyPortal: an application package to construct websites for synteny block analysis.
BMC Bioinform.
Jongin Lee, Daehwan Lee, Mikang Sim, Daehong Kwon, Juyeon Kim, Younhee Ko, Jaebum Kim
2017 J jnl
Synteny Explorer: An Interactive Visualization Application for Teaching Genome Evolution.
IEEE Trans. Vis. Comput. Graph.
Chris Bryan, Gregory Guterman, Kwan-Liu Ma, Harris A. Lewin, Denis M. Larkin, Jaebum Kim, Jian Ma, Marta Farre
2017 — conf
The effect of reference species on reference-guided genome assembly.
CSBio
Juyeon Kim, Daehwan Lee, Mikang Sim, Jongin Lee, Jaebum Kim
2016 J jnl
Synteny Portal: a web-based application portal for synteny block analysis.
Nucleic Acids Res.
Jongin Lee, Woonyoung Hong, Minah Cho, Mikang Sim, Daehwan Lee, Younhee Ko, Jaebum Kim
2014 — conf
Estimating the number of species in metagenomes by clustering next-generation read sequences.
BigComp
Ho-Sik Seok, Woonyoung Hong, Jaebum Kim
2014 J jnl
PSAR-Align: improving multiple sequence alignment using probabilistic sampling.
Bioinform.
Jaebum Kim, Jian Ma
2013 J jnl
Reference-assisted chromosome assembly.
Proc. Natl. Acad. Sci. USA
Jaebum Kim, Denis M. Larkin, Qingle Cai, Asan, Yongfen Zhang, Ri-Li Ge, Loretta Auvil, Boris Capitanu, Guojie Zhang, Harris A. Lewin, Jian Ma
2011 B conf
PSAR: Measuring Multiple Sequence Alignment Reliability by Probabilistic Sampling - (Extended Abstract).
RECOMB
Jaebum Kim, Jian Ma
2010 J jnl
Functional Characterization of Transcription Factor Motifs Using Cross-species Comparison across Large Evolutionary Distances.
PLoS Comput. Biol.
Jaebum Kim, Ryan Cunningham, Brian James, Stefan Wyder, Joshua D. Gibson, Oliver Niehuis, Evgeny M. Zdobnov, Hugh M. Robertson, Gene E. Robinson, John H. Werren, Saurabh Sinha
2010 — —
Probabilistic Model-Based Approach to Evolutionary Analysis of Non-Coding Sequences
Jaebum Kim
2010 J jnl
Towards realistic benchmarks for multiple alignments of non-coding sequences.
BMC Bioinform.
Jaebum Kim, Saurabh Sinha
2008 — conf
A fast two-pass HDL simulation with on-demand dump.
ASP-DAC
Kyuho Shim, Young-Rae Cho, Namdo Kim, Hyuncheol Baik, Kyungkuk Kim, Dusung Kim, Jaebum Kim, Byeongun Min, Kyumyung Choi, Maciej J. Ciesielski, Seiyang Yang
2008 — conf
PerRank: Personalized Rank Retrieval with Categorical and Numerical Attributes.
WAIM
Sangkyum Kim, Jaebum Kim, Younhee Ko, Seung-won Hwang, Jiawei Han
2007 J jnl
Indelign: a probabilistic framework for annotation of insertions and deletions in a multiple alignment.
Bioinform.
Jaebum Kim, Saurabh Sinha
2007 J jnl
Modified enhanced max-log-maximum a posteriori algorithm using variable scaling factor.
IET Commun.
Jaebum Kim, J. Kim, Hyuncheol Park, B. Kim, S. Park
2006 — conf
A Search Ant and Labor Ant Algorithm for Clustering Data.
ANTS Workshop
Heesang Lee, Gyuseok Shim, Yun Bae Kim, Jinsoo Park, Jaebum Kim
2005 J jnl
A new enhanced coding scheme for robust bit-stream of ATSC DTV.
IEEE Trans. Consumer Electron.
Jaebum Kim, Namshik Kim, Kumran Ji, Seungwon Kim, Hyuncheol Park
2005 J jnl
Corrections to "A new enhanced coding scheme for robust bit-stream of ATSC DTV".
IEEE Trans. Consumer Electron.
Jaebum Kim, Namshik Kim, Kumran Ji, Seungwon Kim, Hyuncheol Park
2004 — conf
Empirical Analysis for Individual Behavior of Impatient Customers in a Call Center.
AsiaSim
Yun Bae Kim, Chang Hun Lee, Jaebum Kim, Gyutai Kim, Jong Seon Hong
2002 — conf
Catalog Integration for Electronic Commerce through Category-Hierarchy Merging Technique.
RIDE
Dongkyu Kim, Jaebum Kim, Sang-goo Lee