Jae Won Choi

20 papers A* 1Journal 13Unranked 6
YearRankTypeTitle / Venue / Authors
2026 J jnl
Medical Image Anal.
Vladyslav Zalevskyi, Thomas Sanchez, Misha P. T. Kaandorp, Margaux Roulet, Diego Fajardo-Rojas, Liu Li, Jana Hutter, Hongwei Bran Li, Matthew J. Barkovich, Hui Ji, Luca Wilhelmi, Aline Dändliker, Céline Steger, Mériam Koob, Yvan Gomez, Anton Jakovcic, Melita Klaic, Ana Adzic, Pavel Markovic, Gracia Grabaric, Milan Rados, Jordina Aviles Verdera, Gregor Kasprian, Gregor Dovjak, Raphael Gaubert-Rachmühl, Maurice Aschwanden, Qi Zeng, Davood Karimi, Denis Peruzzo, Tommaso Ciceri, Giorgio Longari, Rachika E. Hamadache, Amina Bouzid, Xavier Lladó, Simone Chiarella, Gerard Martí-Juan, Miguel Ángel González Ballester, Marco Castellaro, Marco Pinamonti, Valentina Visani, Robin Cremese, Keïn Sam, Fleur Gaudfernau, Param Ahir, Mehul Parikh, Maximilian Zenk, Michael Baumgartner, Klaus H. Maier-Hein, Li Tianhong, Yang Hong, Zhao Longfei, Domen Preloznik, Ziga Spiclin, Jae Won Choi, Muyang Li, Jia Fu, Guotai Wang, Jingwen Jiang, Lyuyang Tong, Bo Du, Andrea Gondova, Sungmin You, Kiho Im, Abdul Qayyum, Moona Mazher, Steven A. Niederer, András Jakab, Roxane Licandro, Kelly Payette, Meritxell Bach Cuadra
2025 J jnl
CoRR
Vladyslav Zalevskyi, Thomas Sanchez, Misha P. T. Kaandorp, Margaux Roulet, Diego Fajardo-Rojas, Liu Li, Jana Hutter, Hongwei Bran Li, Matthew J. Barkovich, Hui Ji, Luca Wilhelmi, Aline Dändliker, Céline Steger, Mériam Koob, Yvan Gomez, Anton Jakovcic, Melita Klaic, Ana Adzic, Pavel Markovic, Gracia Grabaric, Milan Rados, Jordina Aviles Verdera, Gregor Kasprian, Gregor Dovjak, Raphael Gaubert-Rachmühl, Maurice Aschwanden, Qi Zeng, Davood Karimi, Denis Peruzzo, Tommaso Ciceri, Giorgio Longari, Rachika E. Hamadache, Amina Bouzid, Xavier Lladó, Simone Chiarella, Gerard Martí-Juan, Miguel Ángel González Ballester, Marco Castellaro, Marco Pinamonti, Valentina Visani, Robin Cremese, Keïn Sam, Fleur Gaudfernau, Param Ahir, Mehul Parikh, Maximilian Zenk, Michael Baumgartner, Klaus H. Maier-Hein, Li Tianhong, Yang Hong, Zhao Longfei, Domen Preloznik, Ziga Spiclin, Jae Won Choi, Muyang Li, Jia Fu, Guotai Wang, Jingwen Jiang, Lyuyang Tong, Bo Du, Andrea Gondova, Sungmin You, Kiho Im, Abdul Qayyum, Moona Mazher, Steven A. Niederer, András Jakab, Roxane Licandro, Kelly Payette, Meritxell Bach Cuadra
2025 conf
EMNLP (Findings)
Jeongsik Park, Khoi P. N. Nguyen, Jihyung Park, Minseok Kim, Jaeheon Lee, Jae Won Choi, Kalyani Ganta, Phalgun Ashrit Kasu, Rohan Sarakinti, Sanjana Vipperla, Sai Sathanapalli, Nishan Vaghani, Vincent Ng
2024 J jnl
Mach. Learn. Sci. Technol.
Jaekak Yoo, Jae Won Choi, Eunha Kim, Eun-Jung Park, Ahruem Baek, Jaeseok Kim, Mun Seok Jeong, Youngwoo Cho, Tae Geol Lee, Min Beom Heo
2024 conf
PAKDD (2)
Jae Won Choi, Yuzhou Chen, José Frías, Joel Chacón Castillo, Yulia R. Gel
2023 J jnl
Int. J. E Bus. Res.
Youngkeun Choi, Jae Won Choi
2023 J jnl
Medical Image Anal.
Reuben Dorent, Aaron Kujawa, Marina Ivory, Spyridon Bakas, Nicola Rieke, Samuel Joutard, Ben Glocker, M. Jorge Cardoso, Marc Modat, Kayhan Batmanghelich, Arseniy Belkov, Maria G. Baldeon Calisto, Jae Won Choi, Benoit M. Dawant, Hexin Dong, Sergio Escalera, Yubo Fan, Lasse Hansen, Mattias P. Heinrich, Smriti Joshi, Victoriya Kashtanova, Hyeongyu Kim, Satoshi Kondo, Christian N. Kruse, Susana K. Lai-Yuen, Hao Li, Han Liu, Buntheng Ly, Ipek Oguz, Hyungseob Shin, Boris Shirokikh, Zixian Su, Guotai Wang, Jianghao Wu, Yanwu Xu, Kai Yao, Li Zhang, Sébastien Ourselin, Jonathan Shapey, Tom Vercauteren
2023 J jnl
CoRR
Jun Ma, Yao Zhang, Song Gu, Cheng Ge, Shihao Ma, Adamo Young, Cheng Zhu, Kangkang Meng, Xin Yang, Ziyan Huang, Fan Zhang, Wentao Liu, YuanKe Pan, Shoujin Huang, Jiacheng Wang, Mingze Sun, Weixin Xu, Dengqiang Jia, Jae Won Choi, Natália Alves, Bram De Wilde, Gregor Köhler, Yajun Wu, Manuel Wiesenfarth, Qiongjie Zhu, Guoqiang Dong, Jian He, FLARE Challenge Consortium, Bo Wang
2022 J jnl
Sensors
Jae Won Choi, Dong Hyun Kim, Dae Lim Koo, Yangmi Park, Hyunwoo Nam, Ji Hyun Lee, Hyo Jin Kim, Seung-No Hong, Gwangsoo Jang, Sungmook Lim, Baekhyun Kim
2022 J jnl
IEEE Robotics Autom. Lett.
Jae Won Choi, Aseem Vivek Borkar, Andrew C. Singer, Girish Chowdhary
2022 J jnl
CoRR
Reuben Dorent, Aaron Kujawa, Marina Ivory, Spyridon Bakas, Nicola Rieke, Samuel Joutard, Ben Glocker, Jorge Cardoso, Marc Modat, Kayhan Batmanghelich, Arseniy Belkov, Maria G. Baldeon Calisto, Jae Won Choi, Benoit M. Dawant, Hexin Dong, Sergio Escalera, Yubo Fan, Lasse Hansen, Mattias P. Heinrich, Smriti Joshi, Victoriya Kashtanova, Hyeongyu Kim, Satoshi Kondo, Christian N. Kruse, Susana K. Lai-Yuen, Hao Li, Han Liu, Buntheng Ly, Ipek Oguz, Hyungseob Shin, Boris Shirokikh, Zixian Su, Guotai Wang, Jianghao Wu, Yanwu Xu, Kai Yao, Li Zhang, Sébastien Ourselin, Jonathan Shapey, Tom Vercauteren
2022 J jnl
CoRR
Jae Won Choi
2022 conf
FLARE@MICCAI
Jae Won Choi
2021 J jnl
Proc. ACM Hum. Comput. Interact.
Subin Park, Heejae Jung, Jae Won Choi, Jihyeon Park, Joonyoung Jun, Minki Chun, Hyunggu Jung
2021 conf
ACSCC
Jae Won Choi, Jeffrey Ludwig, Andrew C. Singer
2021 J jnl
Int. J. E Entrepreneurship Innov.
Youngkeun Choi, Jae Won Choi
2021 conf
BrainLes@MICCAI (2)
Jae Won Choi
2021 J jnl
CoRR
Jae Won Choi
2011 conf
CHI Extended Abstracts
Shinsuke Akabane, Johnson Leu, Hiromi Iwadate, Jae Won Choi, Chin Ching Chang, Saori Nakayama, Madoka Terasaki, Hala Eldemellawy, Masa Inakage, Susumu Furukawa
2010 A* conf
SIGGRAPH ASIA (Posters)
Shinsuke Akabane, Johnson Leu, Ruri Araki, Jae Won Choi, Emily Chang, Saori Nakayama, Hayato Shibahara, Madoka Terasaki, Susumu Furukawa, Masa Inakage
tests/unit/test_apk_cfg_features.py
← Index tests/unit/test_apk_cfg_features.py python
"""
Unit tests for APK CFG feature parity with the Binary Ninja pipeline.

Tests advanced CFG features computed from smali (topology hash, MD-index,
WL-MinHash, prime product, packed adjacency, block features export) and
the slimmed similarity table.

All tests use mocked smali input — no JADX/apktool/Java required.
"""
import pytest

from redb.extractors.decompiler.apk.smali_cfg import (
    SmaliCFGMetrics,
    compute_cfg_metrics,
)
from redb.extractors.decompiler.apk.method_extractor import (
    SMALI_OP_PRIMES,
    compute_prime_product_smali,
    count_call_instructions,
)

pytestmark = [pytest.mark.unit, pytest.mark.apk, pytest.mark.decompile]


# ===================================================================
# Sample smali bodies for testing
# ===================================================================

# Simple linear method: 3 instructions, 1 block
SMALI_LINEAR = """\
    const/4 v0, 0x0
    invoke-virtual {p0, v0}, Lcom/Foo;->bar(I)V
    return-void
"""

# Diamond CFG: if-else with two paths merging
SMALI_DIAMOND = """\
    const/4 v0, 0x1
    if-eqz v0, :cond_0
    invoke-virtual {p0}, Lcom/Foo;->pathA()V
    goto :goto_0
    :cond_0
    invoke-virtual {p0}, Lcom/Foo;->pathB()V
    :goto_0
    return-void
"""

# Loop: a back edge from goto to a label before it
SMALI_LOOP = """\
    const/4 v0, 0x0
    :loop_start
    add-int/lit8 v0, v0, 0x1
    if-lt v0, v1, :loop_start
    return-void
"""

# Multi-block with several invoke calls
SMALI_MULTI_CALL = """\
    invoke-virtual {p0}, Lcom/Foo;->a()V
    invoke-static {v0}, Lcom/Bar;->b(I)V
    invoke-direct {p0, v1}, Lcom/Baz;-><init>(I)V
    const/4 v0, 0x0
    return-void
"""


# ===================================================================
# TestSmaliCFGMetricsAdvanced — new fields in SmaliCFGMetrics
# ===================================================================

class TestSmaliCFGMetricsAdvanced:
    """Test that advanced CFG fields are populated by compute_cfg_metrics."""

    def test_topology_hash_is_bytes(self):
        m = compute_cfg_metrics(SMALI_DIAMOND)
        assert isinstance(m.cfg_topology_hash, bytes)
        assert len(m.cfg_topology_hash) == 16

    def test_topology_hash_nonzero_for_multiblock(self):
        m = compute_cfg_metrics(SMALI_DIAMOND)
        assert m.cfg_topology_hash != b'\x00' * 16

    def test_topology_hash_zero_for_empty(self):
        m = compute_cfg_metrics("")
        assert m.cfg_topology_hash == b'\x00' * 16

    def test_identical_cfg_same_topology_hash(self):
        """Two smali methods with the same CFG structure produce the same hash."""
        smali_a = """\
    const/4 v0, 0x1
    if-eqz v0, :cond_0
    const/4 v1, 0x2
    goto :goto_0
    :cond_0
    const/4 v1, 0x3
    :goto_0
    return-void
"""
        smali_b = """\
    const/4 v5, 0x9
    if-nez v5, :cond_0
    add-int v6, v5, v5
    goto :goto_0
    :cond_0
    sub-int v6, v5, v5
    :goto_0
    return-void
"""
        m_a = compute_cfg_metrics(smali_a)
        m_b = compute_cfg_metrics(smali_b)
        assert m_a.cfg_topology_hash == m_b.cfg_topology_hash

    def test_different_cfg_different_topology_hash(self):
        m_linear = compute_cfg_metrics(SMALI_LINEAR)
        m_diamond = compute_cfg_metrics(SMALI_DIAMOND)
        assert m_linear.cfg_topology_hash != m_diamond.cfg_topology_hash

    def test_md_index_topdown_nonzero(self):
        m = compute_cfg_metrics(SMALI_DIAMOND)
        assert m.md_index_topdown != 0

    def test_md_index_bottomup_nonzero(self):
        m = compute_cfg_metrics(SMALI_DIAMOND)
        assert m.md_index_bottomup != 0

    def test_md_index_zero_for_empty(self):
        m = compute_cfg_metrics("")
        assert m.md_index_topdown == 0
        assert m.md_index_bottomup == 0

    def test_wl_minhash_length(self):
        m = compute_cfg_metrics(SMALI_DIAMOND)
        assert len(m.wl_minhash) == 128

    def test_wl_minhash_sentinel_for_empty(self):
        m = compute_cfg_metrics("")
        assert m.wl_minhash == [255] * 128

    def test_wl_minhash_values_are_uint8(self):
        m = compute_cfg_metrics(SMALI_DIAMOND)
        for val in m.wl_minhash:
            assert 0 <= val <= 255

    def test_cfg_adjacency_nonempty_for_multiblock(self):
        m = compute_cfg_metrics(SMALI_DIAMOND)
        assert len(m.cfg_adjacency) > 0

    def test_cfg_adjacency_empty_for_empty(self):
        m = compute_cfg_metrics("")
        assert m.cfg_adjacency == []

    def test_cfg_adjacency_packed_format(self):
        """Each entry should be (src << 16) | tgt."""
        m = compute_cfg_metrics(SMALI_DIAMOND)
        for edge in m.cfg_adjacency:
            assert isinstance(edge, int)
            src = edge >> 16
            tgt = edge & 0xFFFF
            assert src < m.block_count
            assert tgt < m.block_count

    def test_block_features_exported(self):
        m = compute_cfg_metrics(SMALI_DIAMOND)
        assert len(m.block_features) == m.block_count
        for bf in m.block_features:
            assert len(bf) == 8  # 7 categories + successor_count

    def test_cfg_feature_tlsh_none_for_small(self):
        """Small methods produce None (< 50 bytes of feature data)."""
        m = compute_cfg_metrics(SMALI_LINEAR)
        # Single-block linear method — too small for TLSH
        assert m.cfg_feature_tlsh is None

    def test_loop_count_with_back_edge(self):
        m = compute_cfg_metrics(SMALI_LOOP)
        assert m.loop_count >= 1


# ===================================================================
# TestPrimeProductSmali
# ===================================================================

class TestPrimeProductSmali:

    def test_empty_returns_zero(self):
        assert compute_prime_product_smali("") == 0

    def test_none_returns_zero(self):
        assert compute_prime_product_smali(None) == 0

    def test_known_computation(self):
        """Single invoke instruction → CALL category → prime 17."""
        smali = "    invoke-virtual {p0}, Lcom/Foo;->bar()V"
        assert compute_prime_product_smali(smali) == 17

    def test_two_instructions(self):
        """const (CONST→2) * invoke (CALL→17) = 34."""
        smali = """\
    const/4 v0, 0x0
    invoke-virtual {p0, v0}, Lcom/Foo;->bar(I)V
"""
        assert compute_prime_product_smali(smali) == 2 * 17

    def test_skips_directives_and_labels(self):
        """Directives, labels, and comments should be skipped."""
        smali = """\
.registers 2
.line 10
    :label
    # comment
    const/4 v0, 0x0
"""
        # Only const/4 → CONST → prime 2
        assert compute_prime_product_smali(smali) == 2

    def test_position_independent(self):
        """Reordering instructions produces the same product (multiplication is commutative)."""
        smali_a = """\
    add-int v0, v1, v2
    invoke-virtual {p0}, Lcom/Foo;->bar()V
"""
        smali_b = """\
    invoke-virtual {p0}, Lcom/Foo;->bar()V
    add-int v0, v1, v2
"""
        assert compute_prime_product_smali(smali_a) == compute_prime_product_smali(smali_b)

    def test_all_categories_have_primes(self):
        """Every category in SMALI_OP_PRIMES is a positive integer."""
        for cat, prime in SMALI_OP_PRIMES.items():
            assert isinstance(prime, int)
            assert prime >= 1

    def test_mod_2_64(self):
        """Result should be mod 2^64 (doesn't overflow)."""
        # A very long method — product stays within uint64
        smali = "\n".join(["    mul-int v0, v1, v2"] * 1000)
        result = compute_prime_product_smali(smali)
        assert 0 <= result < 2**64


# ===================================================================
# TestCallCount
# ===================================================================

class TestCallCount:

    def test_empty(self):
        assert count_call_instructions("") == 0

    def test_none(self):
        assert count_call_instructions(None) == 0

    def test_single_invoke(self):
        smali = "    invoke-virtual {p0}, Lcom/Foo;->bar()V"
        assert count_call_instructions(smali) == 1

    def test_multiple_invoke_types(self):
        assert count_call_instructions(SMALI_MULTI_CALL) == 3

    def test_non_invoke_not_counted(self):
        smali = """\
    const/4 v0, 0x0
    add-int v1, v0, v0
    return-void
"""
        assert count_call_instructions(smali) == 0


# ===================================================================
# TestSimilarityTableSlimmed
# ===================================================================

class TestSimilarityTableSlimmed:
    """Verify the similarity table no longer contains moved fields."""

    def test_export_similarity_no_block_count(self):
        """block_count should not be in similarity export columns."""
        from redb.extractors.decompiler.DecompileAPK import DecompileAPK
        from unittest.mock import MagicMock

        extractor = DecompileAPK.__new__(DecompileAPK)
        extractor.log = MagicMock()
        extractor.sha256 = "a" * 64
        extractor.sha1 = "b" * 40
        extractor.md5 = "c" * 32
        extractor.analysis_results = {
            "sha256": "a" * 64,
            "sha1": "b" * 40,
            "md5": "c" * 32,
            "similarity_metrics": [{
                "smali_method_hash": "d" * 64,
                "cyclomatic_complexity": 3,
                "ssdeep_smali": None,
                "tlsh_smali": None,
                "minhash": [1, 2, 3],
            }],
        }

        export = extractor.prepare_export_data("ClickHouseExporter")
        sim_cols = export["method_similarity_metrics"]["column_names"]
        assert "block_count" not in sim_cols
        assert "edge_count" not in sim_cols
        assert "loop_count" not in sim_cols
        assert "max_depth" not in sim_cols
        assert "max_fan_out" not in sim_cols
        # These should still be there
        assert "smali_method_hash" in sim_cols
        assert "ssdeep_smali" in sim_cols
        assert "minhash" in sim_cols
        # cyclomatic_complexity moved to cfg table
        assert "cyclomatic_complexity" not in sim_cols


# ===================================================================
# TestCFGTableExport
# ===================================================================

class TestCFGTableExport:
    """Verify the new CFG table is exported correctly."""

    def test_export_cfg_table_present(self):
        from redb.extractors.decompiler.DecompileAPK import DecompileAPK
        from unittest.mock import MagicMock

        extractor = DecompileAPK.__new__(DecompileAPK)
        extractor.log = MagicMock()
        extractor.analysis_results = {
            "sha256": "a" * 64,
            "sha1": "b" * 40,
            "md5": "c" * 32,
            "cfg": [{
                "smali_method_hash": "d" * 64,
                "cfg_topology_hash": b'\x01' * 16,
                "block_count": 4,
                "edge_count": 5,
                "instructions_count": 20,
                "call_count": 3,
                "cyclomatic_complexity": 3,
                "loop_count": 1,
                "max_depth": 2,
                "max_fan_out": 2,
                "md_index_topdown": 12345,
                "md_index_bottomup": 67890,
                "prime_product_smali": 999,
                "cfg_feature_tlsh": None,
                "wl_minhash": [0] * 128,
                "bb_features": [[10, 1, 0, 2, 1, 0, 0, 2]] * 4,
                "cfg_adjacency": [0x00010000, 0x00010002],
            }],
        }

        export = extractor.prepare_export_data("ClickHouseExporter")
        assert "cfg_methods" in export
        cfg_export = export["cfg_methods"]
        assert cfg_export["table"] == "code_apk_cfg_methods"
        assert len(cfg_export["data"]) == 1
        assert "cfg_topology_hash" in cfg_export["column_names"]
        assert "prime_product_smali" in cfg_export["column_names"]
        assert "wl_minhash" in cfg_export["column_names"]
        assert "bb_features" in cfg_export["column_names"]
        assert "cfg_adjacency" in cfg_export["column_names"]
        # Verify column count matches data width
        assert len(cfg_export["column_names"]) == len(cfg_export["data"][0])
        assert len(cfg_export["column_type_names"]) == len(cfg_export["data"][0])