Jacques Corbeil

31 papers A 1C 1Journal 22Unranked 7

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Extracting a COVID-19 signature from a multi-omic dataset. Frontiers Bioinform. Baptiste Bauvin, Thibaud Godon, Guillaume Bachelot, Claudia Carpentier, Riikka Huusaari, Maxime Déraspe, Juho Rousu, Caroline Quach, Jacques Corbeil
2024	J	`jnl`	Learning self-supervised molecular representations for drug-drug interaction prediction. BMC Bioinform. Rogia Kpanou, Patrick Dallaire, Elsa Rousseau, Jacques Corbeil
2023	J	`jnl`	Invariant Causal Set Covering Machines. CoRR Thibaud Godon, Baptiste Bauvin, Pascal Germain, Jacques Corbeil, Alexandre Drouin
2023	—	`conf`	MOT: A Multi-Omics Transformer for Multiclass Classification Tumour Types Predictions. BIOINFORMATICS Mazid Abiodoun Osseni, Prudencio Tossou, François Laviolette, Jacques Corbeil
2023	A	`conf`	Sample Boosting Algorithm (SamBA) - An interpretable greedy ensemble classifier based on local expertise for fat data. UAI Baptiste Bauvin, Cécile Capponi, Florence Clerc, Pascal Germain, Sokol Koço, Jacques Corbeil
2022	—	`conf`	Integrating and reporting full multi-view supervised learning experiments using SuMMIT. LIDTA Baptiste Bauvin, Jacques Corbeil, Dominique Benielli, Sokol Koço, Cécile Capponi
2022	J	`jnl`	RandomSCM: interpretable ensembles of sparse classifiers tailored for omics data. CoRR Thibaud Godon, Pier-Luc Plante, Baptiste Bauvin, Elina Francovic-Fontaine, Alexandre Drouin, Jacques Corbeil
2021	—	`conf`	Applying PySCMGroup to Breast Cancer Biomarkers Discovery. BIOINFORMATICS Mazid Abiodoun Osseni, Prudencio Tossou, Jacques Corbeil, François Laviolette
2021	J	`jnl`	Exploring polypharmacy with artificial intelligence: data analysis protocol. BMC Medical Informatics Decis. Mak. Caroline Sirois, Richard Khoury, Audrey Durand, Pierre-Luc Déziel, Olga Bukhtiyarova, Yohann Chiu, Denis Talbot, Alexandre Bureau, Philippe Després, Christian Gagné, François Laviolette, Anne-Marie Savard, Jacques Corbeil, Thierry Badard, Sonia Jean, Marc Simard
2021	J	`jnl`	On the robustness of generalization of drug-drug interaction models. BMC Bioinform. Rogia Kpanou, Mazid Abiodoun Osseni, Prudencio Tossou, François Laviolette, Jacques Corbeil
2021	—	`conf`	Optimization & Characterization of Interdigitated Electrodes for Microbial Growth Monitoring. EMBC SeyedSina Hosseini, Partha Sarati Das, Gabriel Gagnon-Turcotte, P. BL-George, Younès Messaddeq, Jacques Corbeil, Benoit Gosselin
2020	—	`conf`	The EcoChip 2: An Autonomous Sensor Platform for Multimodal Bio-environmental Monitoring of the Northern Habitat. EMBC Partha Sarati Das, Gabriel Gagnon-Turcotte, Karim Ouazaa, Karim Bouzid, SeyedSina Hosseini, Eric Bharucha, Denise M. Tremblay, Sylvain Moineau, Younès Messaddeq, Jacques Corbeil, Benoit Gosselin
2018	C	`conf`	The EcoChip: A Wireless Multi-Sensor Platform for Comprehensive Environmental Monitoring. ISCAS Matthieu Sylvain, Francis Lehoux, Steeve Morency, Felix Faucher, Eric Bharucha, Denise M. Tremblay, Denis Sarrazin, Sylvain Moineau, Michel Allard, Jacques Corbeil, Younès Messaddeq, Benoit Gosselin
2018	J	`jnl`	The EcoChip: A Wireless Multi-Sensor Platform for Comprehensive Environmental Monitoring. IEEE Trans. Biomed. Circuits Syst. Matthieu Sylvain, Francis Lehoux, Steeve Morency, Felix Faucher, Eric Bharucha, Denise M. Tremblay, Frédéric Raymond, Denis Sarrazin, Sylvain Moineau, Michel Allard, Jacques Corbeil, Younès Messaddeq, Benoit Gosselin
2016	J	`jnl`	Large scale modeling of antimicrobial resistance with interpretable classifiers. CoRR Alexandre Drouin, Frédéric Raymond, Gaël Letarte St-Pierre, Mario Marchand, Jacques Corbeil, François Laviolette
2016	—	`conf`	Making Linked Data SPARQL with the InterMine Biological Data Warehouse. SWAT4LS Maxime Déraspe, Gail Binkley, Daniela Butano, Matthew Chadwick, J. Michael Cherry, Justin Clark-Casey, Sergio Contrino, Jacques Corbeil, Joshua Heimbach, Kalpana Karra, Rachel Lyne, Julie M. Sullivan, Yo Yehudi, Gos Micklem, Michel Dumontier
2016	—	`conf`	Semantic Research Platform for Model Organisms. BMDID@ISWC Maxime Déraspe, Kalpana Karra, Gail Binkley, Julie M. Sullivan, Gos Micklem, Jacques Corbeil, J. Michael Cherry, Michel Dumontier
2015	J	`jnl`	Greedy Biomarker Discovery in the Genome with Applications to Antimicrobial Resistance. CoRR Alexandre Drouin, Sébastien Giguère, Maxime Déraspe, François Laviolette, Mario Marchand, Jacques Corbeil
2015	J	`jnl`	Machine Learning Assisted Design of Highly Active Peptides for Drug Discovery. PLoS Comput. Biol. Sébastien Giguère, François Laviolette, Mario Marchand, Denise M. Tremblay, Sylvain Moineau, Xinxia Liang, Éric Biron, Jacques Corbeil
2014	J	`jnl`	Learning interpretable models of phenotypes from whole genome sequences with the Set Covering Machine. CoRR Alexandre Drouin, Sébastien Giguère, Vladana Sagatovich, Maxime Déraspe, François Laviolette, Mario Marchand, Jacques Corbeil
2013	J	`jnl`	Human Analysts at Superhuman Scales: What Has Friendly Software To Do? Big Data Élénie Godzaridis, Sébastien Boisvert, Fangfang Xia, Mikhail Kandel, Steve Behling, Bill Long, Carlos P. Sosa, François Laviolette, Jacques Corbeil
2013	J	`jnl`	Learning a peptide-protein binding affinity predictor with kernel ridge regression. BMC Bioinform. Sébastien Giguère, Mario Marchand, François Laviolette, Alexandre Drouin, Jacques Corbeil
2012	J	`jnl`	Building an HIV data mashup using Bio2RDF. Briefings Bioinform. Marc-Alexandre Nolin, Michel Dumontier, François Belleau, Jacques Corbeil
2012	J	`jnl`	Feature Selection with Conjunctions of Decision Stumps and Learning from Microarray Data. IEEE Trans. Pattern Anal. Mach. Intell. Mohak Shah, Mario Marchand, Jacques Corbeil
2012	J	`jnl`	Learning a peptide-protein binding affinity predictor with kernel ridge regression CoRR Sébastien Giguère, Mario Marchand, François Laviolette, Alexandre Drouin, Jacques Corbeil
2011	J	`jnl`	A General Framework for Analyzing Data from Two Short Time-Series Microarray Experiments. IEEE ACM Trans. Comput. Biol. Bioinform. Mohak Shah, Jacques Corbeil
2010	J	`jnl`	Feature Selection with Conjunctions of Decision Stumps and Learning from Microarray Data CoRR Mohak Shah, Mario Marchand, Jacques Corbeil
2010	J	`jnl`	Ray: Simultaneous Assembly of Reads from a Mix of High-Throughput Sequencing Technologies. J. Comput. Biol. Sébastien Boisvert, François Laviolette, Jacques Corbeil
2003	J	`jnl`	2HAPI: A Microarray Data Analysis System. Bioinform. J. Lynn Fink, Scott Drewes, Hiren Patel, John B. Welsh, Daniel R. Masys, Jacques Corbeil, Michael Gribskov
2002	J	`jnl`	Statistical analysis of high-density oligonucleotide arrays: a multiplicative noise model. Bioinform. Roman Sásik, Ézéquiel Calvo, Jacques Corbeil
2001	J	`jnl`	Use of keyword hierarchies to interpret gene expression patterns. Bioinform. Daniel R. Masys, John B. Welsh, J. Lynn Fink, Michael Gribskov, Igor Klacansky, Jacques Corbeil