J. Gordon Burleigh

25 papers B 2Journal 14Unranked 9
YearRankTypeTitle / Venue / Authors
2018 — conf
A Natural Language Processing Pipeline to Extract Phenotypic Data from Formal Taxonomic Descriptions with a Focus on Flagellate Plants.
ICBO
Lorena Endara, J. Gordon Burleigh, Laurel Cooper, Pankaj Jaiswal, Marie-Angélique Laporte, Hong Cui
2015 — conf
Constructing and Employing Tree Alignment Graphs for Phylogenetic Synthesis.
AlCoB
Ruchi Chaudhary, David Fernández-Baca, J. Gordon Burleigh
2015 J jnl
Constructing and Employing Tree Alignment Graphs for Phylogenetic Synthesis.
CoRR
Ruchi Chaudhary, David Fernández-Baca, J. Gordon Burleigh
2014 — conf
Extracting phylogenetic signals from multi-labeled gene trees and its significance for species tree construction.
BCB
Ryan Cobb, Rasha Elhesha, J. Gordon Burleigh, Tamer Kahveci
2013 J jnl
Efficient Algorithms for Knowledge-Enhanced Supertree and Supermatrix Phylogenetic Problems.
IEEE ACM Trans. Comput. Biol. Bioinform.
André Wehe, J. Gordon Burleigh, Oliver Eulenstein
2013 J jnl
Stability analysis of phylogenetic trees.
Bioinform.
Saad I. Sheikh, Tamer Kahveci, Sanjay Ranka, J. Gordon Burleigh
2012 J jnl
A scalable method for identifying frequent subtrees in sets of large phylogenetic trees.
BMC Bioinform.
Avinash Ramu, Tamer Kahveci, J. Gordon Burleigh
2012 — conf
Algorithms for Knowledge-Enhanced Supertrees.
ISBRA
André Wehe, J. Gordon Burleigh, Oliver Eulenstein
2012 J jnl
Consensus properties for the deep coalescence problem and their application for scalable tree search.
BMC Bioinform.
Harris T. Lin, J. Gordon Burleigh, Oliver Eulenstein
2012 J jnl
Efficient error correction algorithms for gene tree reconciliation based on duplication, duplication and loss, and deep coalescence.
BMC Bioinform.
Ruchi Chaudhary, J. Gordon Burleigh, Oliver Eulenstein
2012 J jnl
Fast Local Search for Unrooted Robinson-Foulds Supertrees.
IEEE ACM Trans. Comput. Biol. Bioinform.
Ruchi Chaudhary, J. Gordon Burleigh, David Fernández-Baca
2012 — conf
GTP Supertrees from Unrooted Gene Trees: Linear Time Algorithms for NNI Based Local Searches.
ISBRA
Pawel Górecki, J. Gordon Burleigh, Oliver Eulenstein
2012 J jnl
Inferring Species Trees from Incongruent Multi-Copy Gene Trees Using the Robinson-Foulds Distance
CoRR
Ruchi Chaudhary, J. Gordon Burleigh, David Fernández-Baca
2011 — conf
Algorithms for Rapid Error Correction for the Gene Duplication Problem.
ISBRA
Ruchi Chaudhary, J. Gordon Burleigh, Oliver Eulenstein
2011 J jnl
An ILP solution for the gene duplication problem.
BMC Bioinform.
Wen-Chieh Chang, J. Gordon Burleigh, David Fernández-Baca, Oliver Eulenstein
2011 — conf
Fast Local Search for Unrooted Robinson-Foulds Supertrees.
ISBRA
Ruchi Chaudhary, J. Gordon Burleigh, David Fernández-Baca
2011 J jnl
Maximum likelihood models and algorithms for gene tree evolution with duplications and losses.
BMC Bioinform.
Pawel Górecki, J. Gordon Burleigh, Oliver Eulenstein
2011 — conf
The Deep Coalescence Consensus Tree Problem is Pareto on Clusters.
ISBRA
Harris T. Lin, J. Gordon Burleigh, Oliver Eulenstein
2010 J jnl
Efficient genome-scale phylogenetic analysis under the duplication-loss and deep coalescence cost models.
BMC Bioinform.
Mukul S. Bansal, J. Gordon Burleigh, Oliver Eulenstein
2010 — conf
Inferring species trees from gene duplication episodes.
BCB
J. Gordon Burleigh, Mukul S. Bansal, Oliver Eulenstein, Todd J. Vision
2010 J jnl
Robinson-Foulds Supertrees.
Algorithms Mol. Biol.
Mukul S. Bansal, J. Gordon Burleigh, Oliver Eulenstein, David Fernández-Baca
2009 J jnl
Triplet supertree heuristics for the tree of life.
BMC Bioinform.
Harris T. Lin, J. Gordon Burleigh, Oliver Eulenstein
2008 J jnl
DupTree: a program for large-scale phylogenetic analyses using gene tree parsimony.
Bioinform.
André Wehe, Mukul S. Bansal, J. Gordon Burleigh, Oliver Eulenstein
2008 B conf
Locating Multiple Gene Duplications through Reconciled Trees.
RECOMB
J. Gordon Burleigh, Mukul S. Bansal, André Wehe, Oliver Eulenstein
2007 B conf
Heuristics for the Gene-Duplication Problem: A
RECOMB
Mukul S. Bansal, J. Gordon Burleigh, Oliver Eulenstein, André Wehe