Ivelin Georgiev

11 papers A 1B 2Journal 6Unranked 2
YearRankTypeTitle / Venue / Authors
2016 J jnl
BWM*: A Novel, Provable, Ensemble-based Dynamic Programming Algorithm for Sparse Approximations of Computational Protein Design.
J. Comput. Biol.
Jonathan D. Jou, Swati Jain, Ivelin Georgiev, Bruce Randall Donald
2015 J jnl
: Comprehensive Sieve Analysis of Breakthrough HIV-1 Sequences in the RV144 Vaccine Efficacy Trial.
PLoS Comput. Biol.
Paul Thatcher Edlefsen, Morgane Rolland, Tomer Hertz, Sodsai Tovanabutra, Andrew J. Gartland, Allan C. deCamp, Craig A. Magaret, Hasan Ahmed, Raphael Gottardo, Michal Juraska, Connor McCoy, Brendan B. Larsen, Eric Sanders-Buell, Chris Carrico, Sergey Menis, Meera Bose, Miguel A. Arroyo, Robert J. O'Connell, Sorachai Nitayaphan, Punnee Pitisuttithum, Jaranit Kaewkungwal, Supachai Rerks-Ngarm, Merlin L. Robb, Tatsiana Kirys, Ivelin Georgiev, Peter D. Kwong, Konrad Scheffler, Sergei L. Kosakovsky Pond, Jonathan M. Carlson, Nelson Michael, William R. Schief, James I. Mullins, Jerome H. Kim, Peter B. Gilbert
2015 B conf
BWM*: A Novel, Provable, Ensemble-Based Dynamic Programming Algorithm for Sparse Approximations of Computational Protein Design.
RECOMB
Jonathan D. Jou, Swati Jain, Ivelin Georgiev, Bruce Randall Donald
2014 J jnl
NEP: web server for epitope prediction based on antibody neutralization of viral strains with diverse sequences.
Nucleic Acids Res.
Gwo-Yu Chuang, David Liou, Peter D. Kwong, Ivelin Georgiev
2012 J jnl
Computational prediction of N-linked glycosylation incorporating structural properties and patterns.
Bioinform.
Gwo-Yu Chuang, Jeffrey C. Boyington, M. Gordon Joyce, Jiang Zhu, Gary J. Nabel, Peter D. Kwong, Ivelin Georgiev
2012 J jnl
The Role of Local Backrub Motions in Evolved and Designed Mutations.
PLoS Comput. Biol.
Daniel A. Keedy, Ivelin Georgiev, Edward B. Triplett, Bruce Randall Donald, David C. Richardson, Jane S. Richardson
2008 A conf
Algorithm for backrub motions in protein design.
ISMB
Ivelin Georgiev, Daniel A. Keedy, Jane S. Richardson, David C. Richardson, Bruce Randall Donald
2008 J jnl
The minimized dead-end elimination criterion and its application to protein redesign in a hybrid scoring and search algorithm for computing partition functions over molecular ensembles.
J. Comput. Chem.
Ivelin Georgiev, Ryan H. Lilien, Bruce Randall Donald
2007 — conf
Dead-End Elimination with Backbone Flexibility.
ISMB/ECCB (Supplement of Bioinformatics)
Ivelin Georgiev, Bruce Randall Donald
2006 B conf
A Novel Minimized Dead-End Elimination Criterion and Its Application to Protein Redesign in a Hybrid Scoring and Search Algorithm for Computing Partition Functions over Molecular Ensembles.
RECOMB
Ivelin Georgiev, Ryan H. Lilien, Bruce Randall Donald
2006 — conf
Improved Pruning algorithms and Divide-and-Conquer strategies for Dead-End Elimination, with application to protein design.
ISMB (Supplement of Bioinformatics)
Ivelin Georgiev, Ryan H. Lilien, Bruce Randall Donald