Ivan Rossi

19 papers Journal 15Unranked 4
YearRankTypeTitle / Venue / Authors
2025 J jnl
Beyond Cox Models: Assessing the Performance of Machine-Learning Methods in Non-Proportional Hazards and Non-Linear Survival Analysis.
CoRR
Ivan Rossi, Flavio Sartori, Cesare Rollo, Giovanni Birolo, Piero Fariselli, Tiziana Sanavia
2025 J jnl
Beyond Cox models: Assessing the performance of machine-learning methods in non-proportional hazards and non-linear survival analysis.
Comput. Biol. Medicine
Giovanni Birolo, Ivan Rossi, Flavio Sartori, Cesare Rollo, Piero Fariselli, Tiziana Sanavia
2025 J jnl
JanusDDG: A Thermodynamics-Compliant Model for Sequence-Based Protein Stability via Two-Fronts Multi-Head Attention.
CoRR
Guido Barducci, Ivan Rossi, Francesco Codicè, Cesare Rollo, Valeria Repetto, Corrado Pancotti, Virginia Iannibelli, Tiziana Sanavia, Piero Fariselli
2025 J jnl
Mass Balance Approximation of Unfolding Improves Potential-Like Methods for Protein Stability Predictions.
CoRR
Ivan Rossi, Guido Barducci, Tiziana Sanavia, Paola Turina, Emidio Capriotti, Piero Fariselli
2025 J jnl
SurvHive: a package to consistently access multiple survival-analysis packages.
CoRR
Giovanni Birolo, Ivan Rossi, Flavio Sartori, Cesare Rollo, Tiziana Sanavia, Piero Fariselli
2024 J jnl
SYNDSURV: A simple framework for survival analysis with data distributed across multiple institutions.
Comput. Biol. Medicine
Cesare Rollo, Corrado Pancotti, Giovanni Birolo, Ivan Rossi, Tiziana Sanavia, Piero Fariselli
2023 — conf
Multiple Sclerosis Survival Prediction Results from DSM-COMPBIO UNITO.
CLEF (Working Notes)
Ivan Rossi, Giovanni Birolo, Piero Fariselli
2019 J jnl
Fido-SNP: the first webserver for scoring the impact of single nucleotide variants in the dog genome.
Nucleic Acids Res.
Emidio Capriotti, Ludovica Montanucci, Giuseppe Profiti, Ivan Rossi, Diana Giannuzzi, Luca Aresu, Piero Fariselli
2013 J jnl
How to inherit statistically validated annotation within BAR+ protein clusters.
BMC Bioinform.
Damiano Piovesan, Pier Luigi Martelli, Piero Fariselli, Giuseppe Profiti, Andrea Zauli, Ivan Rossi, Rita Casadio
2011 J jnl
ASPicDB: a database of annotated transcript and protein variants generated by alternative splicing.
Nucleic Acids Res.
Pier Luigi Martelli, Mattia D'Antonio, Paola Bonizzoni, Tiziana Castrignanò, Anna Maria D'Erchia, Paolo D'Onorio De Meo, Piero Fariselli, Michele Finelli, Flavio Licciulli, Marina Mangiulli, Flavio Mignone, Giulio Pavesi, Ernesto Picardi, Raffaella Rizzi, Ivan Rossi, Alessio Valletti, Andrea Zauli, Federico Zambelli, Rita Casadio, Graziano Pesole
2011 J jnl
BAR-PLUS: the Bologna Annotation Resource Plus for functional and structural annotation of protein sequences.
Nucleic Acids Res.
Damiano Piovesan, Pier Luigi Martelli, Piero Fariselli, Andrea Zauli, Ivan Rossi, Rita Casadio
2009 — conf
Prediction of Protein-Protein Interacting Sites: How to Bridge Molecular Events to Large Scale Protein Interaction Networks.
CMSB
Lisa Bartoli, Pier Luigi Martelli, Ivan Rossi, Piero Fariselli, Rita Casadio
2008 J jnl
A three-state prediction of single point mutations on protein stability changes.
BMC Bioinform.
Emidio Capriotti, Piero Fariselli, Ivan Rossi, Rita Casadio
2007 — conf
High Throughput Protein Similarity Searches in the LIBI Grid Problem Solving Environment.
ISPA Workshops
Maria Mirto, Ivan Rossi, Italo Epicoco, Sandro Fiore, Piero Fariselli, Rita Casadio, Giovanni Aloisio
2007 J jnl
The WWWH of remote homolog detection: The state of the art.
Briefings Bioinform.
Piero Fariselli, Ivan Rossi, Emidio Capriotti, Rita Casadio
2006 J jnl
PONGO: a web server for multiple predictions of all-alpha transmembrane proteins.
Nucleic Acids Res.
Mauro Amico, Michele Finelli, Ivan Rossi, Andrea Zauli, Arne Elofsson, Håkan Viklund, Gunnar von Heijne, David Jones, Anders Krogh, Piero Fariselli, Pier Luigi Martelli, Rita Casadio
2005 J jnl
TRAMPLE: the transmembrane protein labelling environment.
Nucleic Acids Res.
Piero Fariselli, Michele Finelli, Ivan Rossi, Mauro Amico, Andrea Zauli, Pier Luigi Martelli, Rita Casadio
2003 — conf
A neural network method to improve prediction of protein-protein interaction sites in heterocomplexes.
NNSP
Piero Fariselli, Andrea Zauli, Ivan Rossi, Michele Finelli, Pier Luigi Martelli, Rita Casadio
2003 J jnl
MaxSubSeq: an algorithm for segment-length optimization. The case study of the transmembrane spanning segments.
Bioinform.
Piero Fariselli, Michele Finelli, Davide Marchignoli, Pier Luigi Martelli, Ivan Rossi, Rita Casadio