Ishwor Thapa

29 papers Misc 1Journal 8Unranked 20
YearRankTypeTitle / Venue / Authors
2025 J jnl
Explainable AI-enhanced machine learning for CBR prediction in stabilized and unstabilized subgrade soils.
Appl. Soft Comput.
Ishwor Thapa, Sufyan Ghani
2025 — conf
Reproducible Gating for High-Resolution Flow Cytometric Characterization of Extracellular Vesicles in Next-Generation Biomarker Studies.
BIOSTEC (1)
Ishwor Thapa, Yohan Kim, Fabrice Lucien, Hesham Ali
2025 J jnl
Revealing the nature of soil liquefaction using machine learning.
Earth Sci. Informatics
Sufyan Ghani, Ishwor Thapa, Sunita Kumari, António Gomes Correia, Panagiotis G. Asteris
2024 — conf
A Robust Network Model for Studying Microbiomes in Precision Agriculture Applications.
ICCS (6)
Suyeon Kim, Ishwor Thapa, Hesham H. Ali
2022 — conf
A multi-omics graph database for data integration and knowledge extraction.
BCB
Suyeon Kim, Ishwor Thapa, Hesham Ali
2021 J jnl
A Multiomics Graph Database System for Biological Data Integration and Cancer Informatics.
J. Comput. Biol.
Ishwor Thapa, Hesham Ali
2020 — conf
Computational Approaches for Drug Design: A Focus on Drug Repurposing.
IWBBIO
Suyeon Kim, Ishwor Thapa, Farial Samadi, Hesham Ali
2020 J jnl
Measurement of structural change in co-expression networks from cancer gene expression data.
Int. J. Data Min. Bioinform.
Qianran Li, Dario Ghersi, Ishwor Thapa, Ling Zhang, Hesham Ali, Kate Cooper
2019 — conf
A New Graph Database System for Multi-omics Data Integration and Mining Complex Biological Information.
ICCABS
Ishwor Thapa, Hesham Ali
2019 J jnl
FunSet: an open-source software and web server for performing and displaying Gene Ontology enrichment analysis.
BMC Bioinform.
Matthew L. Hale, Ishwor Thapa, Dario Ghersi
2019 — conf
Identifying Structural Changes in Correlation Networks Models of Cancer Gene Expression by Stage.
BIBM
Qianran Li, Dario Ghersi, Ishwor Thapa, Ling Zhang, Hesham Ali, Kate Cooper
2019 J jnl
Multiplatform biomarker identification using a data-driven approach enables single-sample classification.
BMC Bioinform.
Ling Zhang, Ishwor Thapa, Christian Haas, Dhundy Bastola
2019 — conf
On Identifying Candidates for Drug Repurposing for the Treatment of Ulcerative Colitis using Gene Expression Data.
IWBBIO (1)
Suyeon Kim, Ishwor Thapa, Ling Zhang, Hesham Ali
2018 — conf
A Graph-Theoretic Approach for Identifying Bacterial Inter-correlations and Functional Pathways in Microbiome Data.
BIBM
Suyeon Kim, Ishwor Thapa, Hesham H. Ali
2017 J jnl
A study of bias and increasing organismal complexity from their post-translational modifications and reaction site interplays.
Briefings Bioinform.
Oliver Bonham-Carter, Ishwor Thapa, Steven G. From, Dhundy Bastola
2017 — conf
A systems biology approach for modeling microbiomes using split graphs.
BIBM
Suyeon Kim, Ishwor Thapa, Guoqing Lu, Lifeng Zhu, Hesham H. Ali
2015 — conf
A novel approach to identify shared fragments in drugs and natural products.
BIBM
Akshay Balasubramanya, Ishwor Thapa, Dhundy Bastola, Dario Ghersi
2015 — conf
Guilt-by association approach to identify novel human aging-related genes using protein domains.
BIBM
Jasjit K. Banwait, Schuyler P. Dougherty, Ishwor Thapa, Dhundy Kiran Bastola
2015 — conf
Next generation sequence assembler mis-assembly of phage genomes with terminal redundancy.
BIBM
Julia Warnke-Sommer, Ishwor Thapa, Hesham H. Ali
2015 — conf
Transcriptome analysis of HIV-1 virus in understanding the effect of antiretroviral drugs (cART) and methamphetamine on the virus.
BIBM
Ishwor Thapa, Howard S. Fox, Dhundy R. Bastola
2014 — conf
Evidence of post translational modification bias extracted from the tRNA and corresponding amino acid interplay across a set of diverse organisms.
BCB
Oliver Bonham-Carter, Ishwor Thapa, Dhundy Bastola
2013 — conf
On Identifying and Analyzing Significant Nodes in Protein-Protein Interaction Networks.
ICDM Workshops
Rohan Khazanchi, Kathryn Dempsey, Ishwor Thapa, Hesham H. Ali
2013 — conf
On Mining Biological Signals Using Correlation Networks.
ICDM Workshops
Kathryn Dempsey, Ishwor Thapa, Claudia Cortes, Zach Eriksen, Dhundy Bastola, Hesham H. Ali
2012 — conf
A Comparison of Computational Approaches in the Molecular Identification of Pathogenic Organisms.
HISB
Dhundy Bastola, Scott McGrath, Sanjukta Bhowmick, Ishwor Thapa
2012 — conf
A comparison between hierarchical clustering and community detection method in the collection of gene targets for molecular identification of pathogenic fungi.
BIBM Workshops
Ishwor Thapa, Sanjukta Bhowmick, Dhundy Bastola
2012 J jnl
Functional identification in correlation networks using gene ontology edge annotation.
Int. J. Comput. Biol. Drug Des.
Kathryn Dempsey, Ishwor Thapa, Dhundy Bastola, Hesham H. Ali
2011 — conf
Identifying modular function via edge annotation in gene correlation networks using Gene Ontology search.
BIBM Workshops
Kathryn Dempsey, Ishwor Thapa, Dhundy Bastola, Hesham H. Ali
2010 Misc conf
Assessing the impact of refactoring activities on the JHotDraw project.
SAC
Ishwor Thapa, Harvey P. Siy
2007 — conf
Sambad - Computer Interfaces for Non-literates.
HCI (1)
Sagun Dhakhwa, Patrick A. V. Hall, Ganesh Bahadur Ghimire, Prakash Manandhar, Ishwor Thapa