Irina S. Moreira

18 papers Journal 17
YearRankTypeTitle / Venue / Authors
2025 J jnl
GPCR-A17 MAAP: mapping modulators, agonists, and antagonists to predict the next bioactive target.
J. Cheminformatics
Ana B. Caniceiro, Ana M. B. Amorim, Nícia Rosário-Ferreira, Irina S. Moreira
2024 J jnl
Call for Papers: Data Generation in Healthcare Environments.
J. Biomed. Informatics
Ricardo Cardoso Pereira, Pedro Pereira Rodrigues, Irina S. Moreira, Pedro Henriques Abreu
2024 J jnl
POSEIDON: Peptidic Objects SEquence-based Interaction with cellular DOmaiNs: a new database and predictor.
J. Cheminformatics
António J. Preto, Ana B. Caniceiro, Francisco Duarte, Hugo Fernandes, Lino Ferreira, Joana Mourão, Irina S. Moreira
2024 J jnl
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J. Chem. Inf. Model.
Carlos A. V. Barreto, João N. M. Vitorino, Pedro B. P. S. Reis, Miguel Machuqueiro, Irina S. Moreira
2023 J jnl
DELFOS - drug efficacy leveraging forked and specialized networks - benchmarking scRNA-seq data in multi-omics-based prediction of cancer sensitivity.
Bioinform.
Luiz Felipe Piochi, António J. Preto, Irina S. Moreira
2022 J jnl
DrugTax: package for drug taxonomy identification and explainable feature extraction.
J. Cheminformatics
António J. Preto, Paulo C. Correia, Irina S. Moreira
2021 J jnl
MENSAdb: a thorough structural analysis of membrane protein dimers.
Database J. Biol. Databases Curation
Pedro Matos-Filipe, António J. Preto, Panagiotis I. Koukos, Joana Mourão, Alexandre M. J. J. Bonvin, Irina S. Moreira
2021 — ch.
Predicting Hot Spots Using a Deep Neural Network Approach.
Artificial Neural Networks, 3rd Edition
António J. Preto, Pedro Matos-Filipe, José G. de Almeida, Joana Mourão, Irina S. Moreira
2021 J jnl
SicknessMiner: a deep-learning-driven text-mining tool to abridge disease-disease associations.
BMC Bioinform.
Nícia Rosário-Ferreira, Victor Guimarães, Vítor Santos Costa, Irina S. Moreira
2020 J jnl
Understanding the Binding Specificity of G-Protein Coupled Receptors toward G-Proteins and Arrestins: Application to the Dopamine Receptor Family.
J. Chem. Inf. Model.
António J. Preto, Carlos A. V. Barreto, Salete J. Baptista, José G. de Almeida, Agostinho Lemos, André Melo, M. Natália Dias Soeiro Cordeiro, Zeynep Kurkcuoglu, Rita Melo, Irina S. Moreira
2018 J jnl
Performance of HADDOCK and a simple contact-based protein-ligand binding affinity predictor in the D3R Grand Challenge 2.
J. Comput. Aided Mol. Des.
Zeynep Kurkcuoglu, Panagiotis I. Koukos, Nevia Citro, Mikael E. Trellet, João P. G. L. M. Rodrigues, Irina S. Moreira, Jorge Roel-Touris, Adrien S. J. Melquiond, Cunliang Geng, Jörg Schaarschmidt, Li C. Xue, Anna Vangone, Alexandre M. J. J. Bonvin
2015 J jnl
Solvent Accessible Surface Area-Based Hot-Spot Detection Methods for Protein-Protein and Protein-Nucleic Acid Interfaces.
J. Chem. Inf. Model.
Cristian R. Munteanu, António César Pimenta, Carlos Fernandez-Lozano, André Melo, M. N. D. S. Cordeiro, Irina S. Moreira
2014 J jnl
Dynamic Structure of NGF and proNGF Complexed with p75NTR: Pro-Peptide Effect.
J. Chem. Inf. Model.
António César Pimenta, Daniel F. A. R. Dourado, João M. Martins, André Melo, M. N. Dias Soeiro Cordeiro, Ramiro D. Almeida, Giulia Morra, Irina S. Moreira
2013 J jnl
Extending the applicability of the O-ring theory to protein-DNA complexes.
Comput. Biol. Chem.
R. M. Ramos, L. F. Fernandes, Irina S. Moreira
2013 J jnl
Ligand-Induced Structural Changes in TEM-1 Probed by Molecular Dynamics and Relative Binding Free Energy Calculations.
J. Chem. Inf. Model.
António César Pimenta, João M. Martins, Ruben Fernandes, Irina S. Moreira
2010 J jnl
Protein-protein docking dealing with the unknown.
J. Comput. Chem.
Irina S. Moreira, Pedro Alexandrino Fernandes, Maria João Ramos
2007 J jnl
Computational alanine scanning mutagenesis - An improved methodological approach.
J. Comput. Chem.
Irina S. Moreira, Pedro Alexandrino Fernandes, Maria João Ramos
2003 J jnl
New designs for MRI contrast agents.
J. Comput. Aided Mol. Des.
Pedro Alexandrino Fernandes, Alexandra T. P. Carvalho, A. T. Marques, A. L. F. Pereira, A. P. S. Madeira, Ana Sofia P. Ribeiro, A. F. R. Carvalho, E. T. A. Ricardo, F. J. V. Pinto, Hélder A. Santos, H. D. G. Mangericão, H. M. Martins, H. D. B. Pinto, Hugo R. R. Santos, Irina S. Moreira, M. J. V. Azeredo, R. P. S. Abreu, R. M. S. Oliveira, Sergio F. Sousa, R. J. A. M. Silva, Z. S. Mourão, Maria João Ramos